BAC Information

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BAC

Clone NameB6Ng01-024O02
Chromosome8 (Build37)
Map Location 5,433,399 - 5,434,470
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267, LOC665021, EG623133, EG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275
Downstream geneLOC623409, LOC669429, LOC100040360
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024O02.bB6Ng01-024O02.g
ACCDH856386DH856387
length1,0651,009
definitionDH856386|Mus musculus domesticus DNA, BAC clone: B6Ng01-024O02, 5' end.DH856387|Mus musculus domesticus DNA, BAC clone: B6Ng01-024O02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatactggatattagtccg
ctatccgatttgggataggtaaagactctgaagactaaaatactattttt
gaaaaaaaaatgtgtcttcaaattatgatttgttcaaacatttggactta
cggaaatttttaagacacctgatacaattgttttccttcattactttttt
tttttttttttttcaatttctgttgtcgaggttatgactttggtccagtc
acctttcatacatcaaaatgaacctgctctattgtcaatattttctttta
tttagtcagcatatcattctgttgggagccattaagacaacacaattgtc
ctgatctctgaattgggcctcccccccccaccccccgagaagaaaagggg
gtcaaaagcgggccactgacacaccgctccgagaacaaccacagattgtt
ctagccctaagtcagcgctggatatcctgatctcaagataccctgatacc
gccaagttcctgcttccccatgtaactgcctaaagaatgtgcaattctat
tgccccatccctcctgctgagaagtacttccccttttgcttgtgcaattc
tactgccccatccttcctgctgaaaggcacttccccttttgcttgtgcat
ttaaaccttgggcctggctaatacagtggggctttgatgcaactcagaac
ttttcagtgtcgttattcacacaaggccctcgtctttctctaacccccat
ttggttcttaggagaaggacccctcgagaccctcgaataactggacctgc
tggacgggtcaatcattccaaaatgagaacatactcagcaaaggtgaaaa
tctcaaacctttttttctcttcacacctccatatcactgtttgtcagagt
tctcatctcctaatctatagcatatgttgacctccactgacccttcattt
agcaatgaagtagcagagaatggggtgagttaacacgtgaacccttactt
tcagagtttctatgg
gaattctccactaaacccatctggtcttgggctttttttttttttttttt
tttttttggttggaagactattaatgactgcttttatttgtttaggggtt
atgctaatgtttagatggtttatctgttcctgttttaactttggcacctt
ttatgagtctagaaaattgtccatttcatgccaattttccaataagttga
atataaaattttgtagtaggagctgctgattttttaaatttccatgattt
acattattatgtctcccttttcatttctgattttattaatttggatactg
gttctgtgccttctggttagtctggctaagggtttaatctatcttgttga
tcttctcaaagaaccagctcctggttttgaggataccttgtatagttctt
tttgtttttatttggctgatttcagccctgcatttgattatttcttgcag
tctactcctcttgggtgtatttccttctttttgttctagggatttcaggt
gtgctttcaagctgctaatgtaagctctctccagtttctttttggaggca
cttagagctatgagttttcctcttaccacagctttcattgagtctcataa
gtttgcatatgatgtgtattcattttcattaaattctaaaaactctttaa
atttctttcattatttcttccctgaccaatttatcattgtgtagaacatt
gttcagttttcatgtgtatgtgtgttttccattgtttttgttgggattta
agaccagtctttagtctgtggtgatctgatataggtgtaaagggatgact
ccaatcttcttatatctgttgaggcctaatttgtgaccaattctatggta
agttttggagatgtaccatgaagtgctgagaagaaagtattattttttgc
ttagatgaaatgttctataatatctgtagatccattttgttataactcca
tgtgtgtcacctggtcctctgctaggtttccttcccggattctgtccatt
gatctgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_5433399_5434470
seq2: B6Ng01-024O02.b_44_1108 (reverse)

seq1  CCATAGAAACCTCTGAAAGTAATGTGGTCACGTGTTTAACTCACCCCATT  50
      ||||||||| |||||||||||| | | ||||||| |||||||||||||||
seq2  CCATAGAAA-CTCTGAAAGTAA-GGGTTCACGTG-TTAACTCACCCCATT  47

seq1  CTCTGCTACCTTCATTGCTAAATGAAGGGTTCAGTGGAGGTCAACATATG  100
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  CTCTGCTA-CTTCATTGCTAAATGAAGGG-TCAGTGGAGGTCAACATATG  95

seq1  CTATAAGATTAAGGAGATGAGAACTCTGACAAACAGTGATATGGAGGTGT  150
      |||| ||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTAT-AGATT-AGGAGATGAGAACTCTGACAAACAGTGATATGGAGGTGT  143

seq1  GAAGAG-AAAAAAGGTTTGAGATTTTCACCTTTGCTGAGTATGTTCTCAT  199
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  GAAGAGAAAAAAAGGTTTGAGATTTTCACCTTTGCTGAGTATGTTCTCA-  192

seq1  TTTTGGAATGATTGACCCGTCCAGCAGGTCCAGTTATTCGAGGGTCTCGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAATGATTGACCCGTCCAGCAGGTCCAGTTATTCGAGGGTCTCGA  242

seq1  GGGGTCCTTCTCCTAAGAACCAAATGGGGGTTAGAGAAAGACGAGGGCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCCTTCTCCTAAGAACCAAATGGGGGTTAGAGAAAGACGAGGGCCT  292

seq1  TGTGTGAATAACGACACTGAAAAGTTCTGAGTTGCATCAAAGCCCCACTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAATAACGACACTGAAAAGTTCTGAGTTGCATCAAAGCCCCACTG  342

seq1  TATTAGCCAGGCCCAAGGTTTAAATGCACAAGCAAAAGGGGAAGTGCCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCCAGGCCCAAGGTTTAAATGCACAAGCAAAAGGGGAAGTGCCTT  392

seq1  TCAGCAGGAAGGATGGGGCAGTAGAATTGCACAAGCAAAAGGGGAAGTAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGGAAGGATGGGGCAGTAGAATTGCACAAGCAAAAGGGGAAGTAC  442

seq1  TTCTCAGCAGGAGGGATGGGGCAATAGAATTGCACATTCTTTAGGCAGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCAGGAGGGATGGGGCAATAGAATTGCACATTCTTTAGGCAGTT  492

seq1  ACATGGGGAAGCAGGAACTTGGCGGTATCAGGGTATCTTGAGATCAGGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGGAAGCAGGAACTTGGCGGTATCAGGGTATCTTGAGATCAGGAT  542

seq1  ATCCAGCGCTGACTTAGGGCTAGAACAATCTGTGGTTGTTCTCGGAGCGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCGCTGACTTAGGGCTAGAACAATCTGTGGTTGTTCTCGGAGCGG  592

seq1  TGTGTCAGTGGCCCGCTTTTGACCCCCTTTTCTTCTCGGGGGGTGGGGGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAGTGGCCCGCTTTTGACCCCCTTTTCTTCTCGGGGGGTGGGGGG  642

seq1  GGGAGGCCCAATTCAGAGATCAGGACAATTGTGTTGTCTTAATGGCTCCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCCCAATTCAGAGATCAGGACAATTGTGTTGTCTTAATGGCTCCC  692

seq1  AACAGAATGATATGCTGACTAAATAAAAGAAAATATTGACAATAGAGCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATGATATGCTGACTAAATAAAAGAAAATATTGACAATAGAGCAG  742

seq1  GTTCATTCTGATGTATGAAAGGTGACTGGACCAAAGTCATAACCTCGACA  799
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTTGATGTATGAAAGGTGACTGGACCAAAGTCATAACCTCGACA  792

seq1  ACAGAAATTGAAAAAAAAAAAAAAAAAAAGTAATGAAGGAAAACAATTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAATTGAAAAAAAAAAAAAAAAAAAGTAATGAAGGAAAACAATTGT  842

seq1  ATCAGGTGTCTTAAAAATTTCCGTAAGTCCAAATGTTTGAACAAATCATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTGTCTTAAAAATTTCCGTAAGTCCAAATGTTTGAACAAATCATA  892

seq1  ATTTGAAGACACATTTTTTTTTCAAAAATAGTATTTTAGTCTTCAGAGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGACACATTTTTTTTTCAAAAATAGTATTTTAGTCTTCAGAGTC  942

seq1  TTTACCTATCCCAAATCGGATAGCGGACTAATATCCAGTATATATAAAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTATCCCAAATCGGATAGCGGACTAATATCCAGTATATATAAAGA  992

seq1  ACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGG  1042

seq1  GCTCAGAGCTGAACAAAGAATTC  1072
      |||||||||||||||||||||||
seq2  GCTCAGAGCTGAACAAAGAATTC  1065