BAC Information

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BAC

Clone NameB6Ng01-025C19
Chromosome8 (Build37)
Map Location 6,799,074 - 6,933,125
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040360
Downstream geneEG665127, EG546032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025C19.bB6Ng01-025C19.g
ACCDH856601DH856602
length816281
definitionDH856601|Mus musculus domesticus DNA, BAC clone: B6Ng01-025C19, 5' end.DH856602|Mus musculus domesticus DNA, BAC clone: B6Ng01-025C19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,799,074 - 6,799,901)(6,932,843 - 6,933,125)
sequence
gaattctcttgaaatccatacttctcagatgactcatgttttagtgcagc
aagcatctgctcaaattatcaggagaacattaaatataactgagtatata
agcatctataggacactagacaggacagctgttttatattctcagaatcc
ttttggtaatatctggctctctagcaaatttgaggttaagaaatgtggag
agtgaatgggaaatgacagactgggcagcaggcaaaagatgtatctggta
gagttgatcagcactcctgcatttcctgagacagactgactgctgcccca
gcaggtgggcatgacttgaacccaaaaccatatctaggaagacaaaacag
tgcaagggtcctgttccaactatcatttaaaatggaagcacacaagaata
tgattttcagaatagagaaatagactcctgtccacactgctctgtaataa
atcatcttgaacaagcactgagtcctacatggctgcatgagaaacctttt
ctttcatgctaagtagaattaagtaaactcttaaaatgatgcccctatag
ccatcatttgctaagtccaaacacaaactgcacaaggctcatactgaact
attcttattgtaacaggattgatagcatatattgaaccatgacttaaact
caactgggaatacctatatggaagtagtcctctttgactgactcatttca
ggtgggtgaataagccattgtcccatctctgctttgtgggctcatgaatg
tttgagcaaaaaacatgccactatacttttagtttgaactcagattgatt
cttgaataaaatttaa
ttggaaactggaagaagtttttgtttgtttctctcaaatgtattccccag
ttccaagcatatggaattgtacccattactcaatcactcaatattcgatg
agtgaatttgtatatttattgcatggttaattattgtgaaaaaagtcttg
catttttagaccttctgatatatatatatgtatatatatatgtgtgtgtg
tgtgtctgtgtgtgtgtatatatatatatatatatagagatagacaggca
cacatatatatatatatacatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_6799074_6799901
seq2: B6Ng01-025C19.b_46_861

seq1  GAATTCTCTTGAAATCCATACTTCTCAGATGACTCATGTTTTAGTGCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGAAATCCATACTTCTCAGATGACTCATGTTTTAGTGCAGC  50

seq1  AAGCATCTGCTCAAATTATCAGGAGAACATTAAATATAACTGAGTATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCTGCTCAAATTATCAGGAGAACATTAAATATAACTGAGTATATA  100

seq1  AGCATCTATAGGACACTAGACAGGACAGCTGTTTTATATTCTCAGAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTATAGGACACTAGACAGGACAGCTGTTTTATATTCTCAGAATCC  150

seq1  TTTTGGTAATATCTGGCTCTCTAGCAAATTTGAGGTTAAGAAATGTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTAATATCTGGCTCTCTAGCAAATTTGAGGTTAAGAAATGTGGAG  200

seq1  AGTGAATGGGAAATGACAGACTGGGCAGCAGGCAAAAGATGTATCTGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATGGGAAATGACAGACTGGGCAGCAGGCAAAAGATGTATCTGGTA  250

seq1  GAGTTGATCAGCACTCCTGCATTTCCTGAGACAGACTGACTGCTGCCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGATCAGCACTCCTGCATTTCCTGAGACAGACTGACTGCTGCCCCA  300

seq1  GCAGGTGGGCATGACTTGAACCCAAAACCATATCTAGGAAGACAAAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGGCATGACTTGAACCCAAAACCATATCTAGGAAGACAAAACAG  350

seq1  TGCAAGGGTCCTGTTCCAACTATCATTTAAAATGGAAGCACACAAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGGTCCTGTTCCAACTATCATTTAAAATGGAAGCACACAAGAATA  400

seq1  TGATTTTCAGAATAGAGAAATAGACTCCTGTCCACACTGCTCTGTAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCAGAATAGAGAAATAGACTCCTGTCCACACTGCTCTGTAATAA  450

seq1  ATCATCTTGAACAAGCACTGAGTCCTACATGGCTGCATGAGAAACCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTTGAACAAGCACTGAGTCCTACATGGCTGCATGAGAAACCTTTT  500

seq1  CTTTCATGCTAAGTAGAATTAAGTAAACTCTTAAAATGATGCCCCTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGCTAAGTAGAATTAAGTAAACTCTTAAAATGATGCCCCTATAG  550

seq1  CCATCATTTGCTAAGTCCAAACACAAACTGCACAAGGCTCATACTGAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATTTGCTAAGTCCAAACACAAACTGCACAAGGCTCATACTGAACT  600

seq1  ATTCTTATTGTAACAGGAATTGATAGCATATATTGAACCATGACTTAAAC  650
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTCTTATTGTAACAGG-ATTGATAGCATATATTGAACCATGACTTAAAC  649

seq1  TCAACTGGGAATACCTATATGGAAGTTAGTCCTCTTTGACTGACTCATTT  700
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCAACTGGGAATACCTATATGGAAG-TAGTCCTCTTTGACTGACTCATTT  698

seq1  CAGGTGGGTTGAAATATGCCAATGTCCCCATCTCTGCTTTGTGTGCTCAT  750
      |||||||||   |||| |||| ||| ||||||||||||||||| ||||||
seq2  CAGGTGGGT--GAATAAGCCATTGT-CCCATCTCTGCTTTGTGGGCTCAT  745

seq1  GAATGGTTTGAGCAACATACATGCACATATACTTTTAGTTTTGAACATCA  800
      |||| |||||||||| | ||||||   ||||||||||| ||||||| |||
seq2  GAAT-GTTTGAGCAAAAAACATGCCACTATACTTTTAG-TTTGAAC-TCA  792

seq1  GGATTTGATTCTCTGATATAAAATTTAA  828
      |   |||||||| ||| |||||||||||
seq2  G--ATTGATTCT-TGA-ATAAAATTTAA  816

seq1: chr8_6932843_6933125
seq2: B6Ng01-025C19.g_73_353 (reverse)

seq1  ATATATATGTATGTATATATATATATATATATATATATATATATATATAT  50
      |||||||| ||||  ||||||||||||||| | |   | | ||| | |||
seq2  ATATATATATATG--TATATATATATATATGTGTGCCTGTCTATCTCTAT  48

seq1  ATATATATATATATATACACACACACAGACACACACACACACATATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATACACACACACAGACACACACACACACATATATAT  98

seq1  ATACATATATATATATCAGAAGGTCTAAAAATGCAAGACTTTTTTCACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATATATATATCAGAAGGTCTAAAAATGCAAGACTTTTTTCACAA  148

seq1  TAATTAACCATGCAATAAATATACAAATTCACTCATCGAATATTGAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACCATGCAATAAATATACAAATTCACTCATCGAATATTGAGTGA  198

seq1  TTGAGTAATGGGTACAATTCCATATGCTTGGAACTGGGGAATACATTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTAATGGGTACAATTCCATATGCTTGGAACTGGGGAATACATTTGA  248

seq1  GAGAAACAAACAAAAACTTCTTCCAGTTTCCAA  283
      |||||||||||||||||||||||||||||||||
seq2  GAGAAACAAACAAAAACTTCTTCCAGTTTCCAA  281