BAC Information

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BAC

Clone NameB6Ng01-025K24
Chromosome8 (Build37)
Map Location 99,861,075 - 99,862,115
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC333331
Downstream geneLOC546090, LOC636859, EG384885, LOC100041173, EG636915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025K24.b
ACCDH856954
length1,040
definitionDH856954|Mus musculus domesticus DNA, BAC clone: B6Ng01-025K24, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaggtatctatctggctttgtgggttgatcaacttctgggatc
tctgtccctacaatgtacaaaagtctactgttggactattcaacttctat
tggctataagcccttctagcaataccaacacacacacacacacacacaca
cacacacacacacacacacacacacctgattctgccttaggcaactctgt
ctttcccttcttttggcagatggggaagccatttgggaggaggtgatggt
atagcaggcagatgtccctgctctgacatcaaacatagatctgtggaaaa
aaaaaaagaggaggcaattgagagccattaaggagaatgaaaccacaata
ggatgatggactcacatgtaaaatggattaaagatttattttgcaaaagt
ctagggagcttgggcattatttggtcccatgggataataggataattctt
tacttgacacattgaaagaaaaatgcagattgttcttacacctggtattt
aaaagatcattcttttataattaccatgcaatggatattgctaagtaata
ttcttgataattgctgcagtattcttgccttggttttgaaatggtacttc
ttagagtcagatatacagagccacagattcagctgctttggttttttttt
tttttttttttttttttcttcaagcccttctggaagttaataatgctcct
gagaaagcaattaaactgaaaaaataaagcttcattttgaagaataagca
gcttgcaacctggtttaacgctgagacggcactaataacagagcacttat
gatctaagggagaaaatgaaaagtctttattatttcccgaaatgacagaa
caaccagggcctaaagacacactatcatcatttttgcattagataacgtg
cattttggcaaatgaaatgcttgcttctgggtgttatgtcctccacttta
gggatctggctaaggtaggtaatttcatctctgatataacggggtgctaa
tggtcactttggactcgaagcgaggaaggtaggagggaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_99861075_99862115
seq2: B6Ng01-025K24.b_46_1085 (reverse)

seq1  TTTCCCTCCTACCTTTCCTCTGCTTCTGAGTCCAAAGTGA-CATTAGCA-  48
      ||||||||||||| |||||| ||||| ||||||||||||| |||||||| 
seq2  TTTCCCTCCTACC-TTCCTC-GCTTC-GAGTCCAAAGTGACCATTAGCAC  47

seq1  CTCGTTATATCAGAGATGAAATTAACTA-CTTAGCCAGATCCCTAAAGTG  97
      | |||||||||||||||||||||| ||| |||||||||||||||||||||
seq2  CCCGTTATATCAGAGATGAAATTACCTACCTTAGCCAGATCCCTAAAGTG  97

seq1  GAGGACATAACACTCAGAAGCAAGCATTTCATTTGCCAAAATGCACGTTA  147
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGGACATAACACCCAGAAGCAAGCATTTCATTTGCCAAAATGCACGTTA  147

seq1  TCTAATGCAATAAATGATGATAGTGTGTCTTTAGGCCCTGGTTGTTCTGT  197
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGCAA-AAATGATGATAGTGTGTCTTTAGGCCCTGGTTGTTCTGT  196

seq1  CATTTCGGGAAATAATAAAGACTTTTCATTTTCTCCCTTAGATCATAAGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCGGGAAATAATAAAGACTTTTCATTTTCTCCCTTAGATCATAAGT  246

seq1  GCTCTGTTATTAGTGCCGTCTCAGCGTTAAACCAGGTTGCAAGCTGCTTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTTATTAGTGCCGTCTCAGCGTTAAACCAGGTTGCAAGCTGCTTA  296

seq1  TTCTTCAAAATGAAGCTTTATTTTTTCAGTTTAATTGCTTTCTCAGGAGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAAATGAAGCTTTATTTTTTCAGTTTAATTGCTTTCTCAGGAGC  346

seq1  ATTATTAACTTCCAGAAGGGCTTGAAGAAAAAAAAAAAAAAAAAAAAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAACTTCCAGAAGGGCTTGAAGAAAAAAAAAAAAAAAAAAAAAAA  396

seq1  AAACCAAAGCAGCTGAATCTGTGGCTCTGTATATCTGACTCTAAGAAGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAGCAGCTGAATCTGTGGCTCTGTATATCTGACTCTAAGAAGTA  446

seq1  CCATTTCAAAACCAAGGCAAGAATACTGCAGCAATTATCAAGAATATTAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCAAAACCAAGGCAAGAATACTGCAGCAATTATCAAGAATATTAC  496

seq1  TTAGCAATATCCATTGCATGGTAATTATAAAAGAATGATCTTTTAAATAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAATATCCATTGCATGGTAATTATAAAAGAATGATCTTTTAAATAC  546

seq1  CAGGTGTAAGAACAATCTGCATTTTTCTTTCAATGTGTCAAGTAAAGAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTAAGAACAATCTGCATTTTTCTTTCAATGTGTCAAGTAAAGAAT  596

seq1  TATCCTATTATCCCATGGGACCAAATAATGCCCAAGCTCCCTAGACTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTATTATCCCATGGGACCAAATAATGCCCAAGCTCCCTAGACTTTT  646

seq1  GCAAAATAAATCTTTAATCCATTTTACATGTGAGTCCATCATCCTATTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATAAATCTTTAATCCATTTTACATGTGAGTCCATCATCCTATTGT  696

seq1  GGTTTCATTCTCCTTAATGGCTCTCAATTGCCTCCTCTTTTTTTTTTTCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCATTCTCCTTAATGGCTCTCAATTGCCTCCTCTTTTTTTTTTTCC  746

seq1  ACAGATCTATGTTTGATGTCAGAGCAGGGACATCTGCCTGCTATACCATC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCTATGTTTGATGTCAGAGCAGGGACATCTGCCTGCTATACCATC  796

seq1  ACCTCCTCCCAAATGGCTTCCCCATCTGCCAAAAGAAGGGAAAGACAGAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTCCCAAATGGCTTCCCCATCTGCCAAAAGAAGGGAAAGACAGAG  846

seq1  TTGCCTAAGGCAGAATCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAAGGCAGAATCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  896

seq1  TGTGTGTGTGTGTGTGTTGGTATTGCTAGAAGGGCTTATAGCCAATAGAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTTGGTATTGCTAGAAGGGCTTATAGCCAATAGAA  946

seq1  GTTGAATAGTCCAACAGTAGACTTTTGTACATTGTAGGGACAGAGATCCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATAGTCCAACAGTAGACTTTTGTACATTGTAGGGACAGAGATCCC  996

seq1  AGAAGTTGATCAACCCACAAAGCCAGATAGATACCTTGGAATTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTGATCAACCCACAAAGCCAGATAGATACCTTGGAATTC  1040