BAC Information

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BAC

Clone NameB6Ng01-025M10
Chromosome8 (Build37)
Map Location 120,402,841 - 120,529,591
singlet/doubletdoublet
Overlap genenone
Upstream gene2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan, 4933407C03Rik, Plcg2, 4632417N05Rik, Hsd17b2, Mphosph6
Downstream geneCdh13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025M10.bB6Ng01-025M10.g
ACCDH857011DH857012
length2941,072
definitionDH857011|Mus musculus domesticus DNA, BAC clone: B6Ng01-025M10, 5' end.DH857012|Mus musculus domesticus DNA, BAC clone: B6Ng01-025M10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,402,841 - 120,403,134)(120,528,510 - 120,529,591)
sequence
gaattcccccttggcttcgtttgttaggggtaaacattacttctacccca
ggggaaggattaatgctaaaacgtgttgacattttgacatttttgacagc
ggttccatatgtcagctaggagaaatctggcaatatgttgttagattaaa
aaaaaaataaagttacttgggtcatcatctgatgaccctgatcaatggaa
atggtaatttggagcgtgaggacccatccagatcttctaatttgagagaa
cctttggtaggaaaatgctatgtgtgggtggtggtggtggtgga
gaattcccagacttctattccggagttacacacaggctctgacaggcctt
ccagatccttcttagactaaaacagagtgtgtacacacacacacacacac
acacacacacacacacacacacacactgacatcaccattgatagtctctc
tacactgttctgccctgctgattaacacagtatacagtcgtctggtgtct
gatgagacatgaatatgcaagcaactcctcactccagctaggcccccaac
agcagaccaaagaaacaacttcacccaggctttgtttgggggagtcaatg
agtttcttgtagccacaggctcatgagtaagggatcacaagtgactcaga
ggcatctatgtcactgaaagcccatcacagcactggtgacagcttcaaag
ctgagccctgaggctccttgcacaaggagcagacatctccactgaagatc
tcctccccagcagctgctactgcttaggcatccttgggggaagtcaccgt
gaagctggtaagtttctgagcttcgagatccctgtaatatcgtttagtcc
ccaccaggaagtccctcttctccccaggaggaaataaatttggagggaac
agctctctctatataacacatctctgggctcttctccccggacacaccag
ctcacaaggtgagatttgccaggttcactgcaggagagcttaactccccc
actctccagacacaattgccccgtcactgggaggcaggggctcacaccca
cccagaactgaagcgtgcgtggctgctgcatgccaaggatcctcttgcta
cctcttgctacctcttcgcctcctaccatctaccaatggaagcccttctt
tctgaacatagagaggaaaagggaccaagaacaatgggatctcagataag
cagacacttcgagagaaaacaccctgtagggccagctcagacagcctgca
gtaaagcccgcctccccttgcttcaggctggggtcagcgggggcattgtg
aacacagtatttttctagtgtcttattaatctgtcagtggctgaacatct
gttctcttttctgcttggtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_120402841_120403134
seq2: B6Ng01-025M10.b_44_337

seq1  GAATTCCCCCTTGGCTTCGTTTGTTAGGGGTAAACATTACTTCTACCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCTTGGCTTCGTTTGTTAGGGGTAAACATTACTTCTACCCCA  50

seq1  GGGGAAGGATTAATGCTAAAACGTGTTGACATTTTGACATTTTTGACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGGATTAATGCTAAAACGTGTTGACATTTTGACATTTTTGACAGC  100

seq1  GGTTCCATATGTCAGCTAGGAGAAATCTGGCAATATGTTGTTAGATTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCATATGTCAGCTAGGAGAAATCTGGCAATATGTTGTTAGATTAAA  150

seq1  AAAAAAATAAAGTTACTTGGGTCATCATCTGATGACCCTGATCAATGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAAAGTTACTTGGGTCATCATCTGATGACCCTGATCAATGGAA  200

seq1  ATGGTAATTTGGAGCGTGAGGACCCATCCAGATCTTCTAATTTGAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAATTTGGAGCGTGAGGACCCATCCAGATCTTCTAATTTGAGAGAA  250

seq1  CCTTTGGTAGGAAAATGCTATGTGTGGGTGGTGGTGGTGGTGGA  294
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGTAGGAAAATGCTATGTGTGGGTGGTGGTGGTGGTGGA  294

seq1: chr8_120528510_120529591
seq2: B6Ng01-025M10.g_66_1137 (reverse)

seq1  AAAACACAAGCAGAAAAGAGAACAGATGTTCAGCCACTTGACAGATTTAA  50
      ||||| ||||||||||||||||||||||||||||||| ||||||| ||||
seq2  AAAAC-CAAGCAGAAAAGAGAACAGATGTTCAGCCAC-TGACAGA-TTAA  47

seq1  TAAGACACTTAGAAAAATTACTGTGTTCACATTGCCCCCGCTGACCCCAG  100
      |||||||| |||||||| ||||||||||||| ||||||||||||||||||
seq2  TAAGACAC-TAGAAAAA-TACTGTGTTCACAATGCCCCCGCTGACCCCAG  95

seq1  GCTGGAAGCAAGGGGAGGCGGGGCTTTTACTGCAGGCTGTTCTGAGCTGG  150
       || ||||||||||||||||||   |||||||||||||| ||||||||||
seq2  CCT-GAAGCAAGGGGAGGCGGG--CTTTACTGCAGGCTG-TCTGAGCTGG  141

seq1  CCCTACAGGGTGTTTTCCTCTCGAAGTGTCTGCTTATCTGAGATCCCATT  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCCTACAGGGTGTTTT-CTCTCGAAGTGTCTGCTTATCTGAGATCCCATT  190

seq1  GTTCTTGGTCCCTTTTCCTCTCTATGTTCAGAAAGAAGGGCTTCCATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGGTCCCTTTTCCTCTCTATGTTCAGAAAGAAGGGCTTCCATTGG  240

seq1  TAGATGGTAGGAGGCGAAGAGGTAGCAAGAGGTAGCAAGAGGATCCTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGTAGGAGGCGAAGAGGTAGCAAGAGGTAGCAAGAGGATCCTTGG  290

seq1  CATGCAGCAGCCACGCACGCTTCAGTTCTGGGTGGGTGTGAGCCCCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGCAGCCACGCACGCTTCAGTTCTGGGTGGGTGTGAGCCCCTGCC  340

seq1  TCCCAGTGACGGGGCAATTGTGTCTGGAGAGTGGGGGAGTTAAGCTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTGACGGGGCAATTGTGTCTGGAGAGTGGGGGAGTTAAGCTCTCC  390

seq1  TGCAGTGAACCTGGCAAATCTCACCTTGTGAGCTGGTGTGTCCGGGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGAACCTGGCAAATCTCACCTTGTGAGCTGGTGTGTCCGGGGAGA  440

seq1  AGAGCCCAGAGATGTGTTATATAGAGAGAGCTGTTCCCTCCAAATTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCAGAGATGTGTTATATAGAGAGAGCTGTTCCCTCCAAATTTATT  490

seq1  TCCTCCTGGGGAGAAGAGGGACTTCCTGGTGGGGACTAAACGATATTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGGGGAGAAGAGGGACTTCCTGGTGGGGACTAAACGATATTACA  540

seq1  GGGATCTCGAAGCTCAGAAACTTACCAGCTTCACGGTGACTTCCCCCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTCGAAGCTCAGAAACTTACCAGCTTCACGGTGACTTCCCCCAAG  590

seq1  GATGCCTAAGCAGTAGCAGCTGCTGGGGAGGAGATCTTCAGTGGAGATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTAAGCAGTAGCAGCTGCTGGGGAGGAGATCTTCAGTGGAGATGT  640

seq1  CTGCTCCTTGTGCAAGGAGCCTCAGGGCTCAGCTTTGAAGCTGTCACCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTTGTGCAAGGAGCCTCAGGGCTCAGCTTTGAAGCTGTCACCAG  690

seq1  TGCTGTGATGGGCTTTCAGTGACATAGATGCCTCTGAGTCACTTGTGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGATGGGCTTTCAGTGACATAGATGCCTCTGAGTCACTTGTGATC  740

seq1  CCTTACTCATGAGCCTGTGGCTACAAGAAACTCATTGACTCCCCCAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACTCATGAGCCTGTGGCTACAAGAAACTCATTGACTCCCCCAAACA  790

seq1  AAGCCTGGGTGAAGTTGTTTCTTTGGTCTGCTGTTGGGGGCCTAGCTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGGGTGAAGTTGTTTCTTTGGTCTGCTGTTGGGGGCCTAGCTGGA  840

seq1  GTGAGGAGTTGCTTGCATATTCATGTCTCATCAGACACCAGACGACTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAGTTGCTTGCATATTCATGTCTCATCAGACACCAGACGACTGTA  890

seq1  TACTGTGTTAATCAGCAGGGCAGAACAGTGTAGAGAGACTATCAATGGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGTTAATCAGCAGGGCAGAACAGTGTAGAGAGACTATCAATGGTG  940

seq1  ATGTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  990

seq1  ACACACTCTGTTTTAGTCTAAGAAGGATCTGGAAGGCCTGTCAGAGCCTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTCTGTTTTAGTCTAAGAAGGATCTGGAAGGCCTGTCAGAGCCTG  1040

seq1  TGTGTAACTCCGGAATAGAAGTCTGGGAATTC  1082
      ||||||||||||||||||||||||||||||||
seq2  TGTGTAACTCCGGAATAGAAGTCTGGGAATTC  1072