BAC Information

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BAC

Clone NameB6Ng01-026I17
Chromosome8 (Build37)
Map Location 30,489,832 - 30,609,829
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666446, LOC100042598, Unc5d, LOC100041237
Downstream geneEG628189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026I17.bB6Ng01-026I17.g
ACCDH857558DH857559
length919952
definitionDH857558|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I17, 5' end.DH857559|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,608,905 - 30,609,829)(30,489,832 - 30,490,787)
sequence
gaattctccttctaggccttttcacatcttgcaatagaaatttcctactt
gcccatgaaaggtacattttataaccagtgattaatttggaaatcccttt
gggttggaaagaacaaccattggtaattgtcaagtgagtttttcatgttc
aaagggttcggggaagatggaatggacatagtcatgcaagcttcagtctc
tacctctactgatatcaaattcccataatgtgctgacttgagtttgtttg
ccctggagatgttcaaagagaaaagcatctgagcacagtggagaaggaga
acaagagcaacaagagggtgaaattctatcggcaaaacagggacccatgg
ggattcactacagagttgaagcctccacagaataacagaagaatcgtgaa
ctgtccttcttttgctcctatatgatggactttctgacctttctgacctc
ttccttctttttctttatattatttttctctagcatctttaccttcaggt
agtagccatatattatccttttgaagttttatgtattatatatgtatgta
tttatttatttgcaatacaggggattcaatttaaagcctcatacactata
ggcaaacaaaaccataccattgttttctatggctagtcctgtttttatcc
ttattattttaagatcaaaacacactaaattatccaggttatacttgagt
tttaccttcagcatagagtagacattaccttggattcctcttgtctccac
ctcccaagtggctgtgtaatttgtacgtcccacacagagactgatgtagt
ttgaataggaatggcccctagctaatgggttttatgtgttgcccataggc
tgtacactctaggcatgtggccttatttgatgctgtatgcctctaagggg
tttaggctttgaatctcat
gaattcaatatccctggatacagaaacttctatcttcaattgaactggtt
gatactggaaacagttgtatttttgtaatgtactgttagacttattatgg
tctatatatcctctggaagtgtagcatgtggttttaactgctaagccatc
tctctctaggcccgatatttttagttctgagtagtttttattgttttaat
tttgagattataatataattatatcatttcctcattccttttatccatcc
aaagtttcccatatatacctccttattttcttcaaaactcatgttgtttt
tttttttactaattgctgttacacaaatacatatgtatttatgcatatac
atggatatatacatgtgtgtgtgtgtatgcatatactcctaaataaagcc
tgtgtagtctgaataatgttatgtgtctgtatgttttcaggactatttgg
cactgaataactagttgatgtgctccttcttggagaagactatttccccc
actctcagtatctcatagttgccaggagttctttgcatagtgttgaggtc
tcatggtctttttacccatccacattagcatggtctgttgttacattttt
aataaatttaaagaattatttattttagattcatgcatatgtcagatctg
tgttttacagatatttccactaagactggtcattatttcttctttgtgca
cttttgaacatttatttttatttacctgaaattaaattgatggcttttac
atttatacttgatgatatttgtatctcatttaagatgtctccacattcct
aattacaatgatcttgtcatctgtttattgtaaaagttcagaaattacta
tttaatatagacttacatgagtagttatatctaatttttgactacctggt
gtgaaagatttcttgcagttgcatatccctgatgcagagcagttatggaa
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_30608905_30609829
seq2: B6Ng01-026I17.b_41_959 (reverse)

seq1  ATGAGATTTCAAAGCCTAAACCCCCTAGGGGCATACAGCATCCAATAAGG  50
      |||||| ||||||||||||||||| ||| ||||||||||||| |||||||
seq2  ATGAGA-TTCAAAGCCTAAACCCCTTAGAGGCATACAGCATCAAATAAGG  49

seq1  CCACACTGCCTAGAGTGCTACAGCCTATGGGCAACACATTAAAACCCATT  100
      ||||| ||||||||||| |||||||||||||||||||| |||||||||||
seq2  CCACA-TGCCTAGAGTG-TACAGCCTATGGGCAACACA-TAAAACCCATT  96

seq1  AGCCTAGGGGCCATTCCTATTCAAACTACATTCAGTCTCTGTGTGGGACG  150
      || ||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AG-CTAGGGGCCATTCCTATTCAAACTACA-TCAGTCTCTGTGTGGGACG  144

seq1  TACAAATTACACAGCCACTTGGGAGGTGGAGACAAGAGGAATCCAAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTACACAGCCACTTGGGAGGTGGAGACAAGAGGAATCCAAGGTA  194

seq1  ATGTCTACTCTATGCTGAAGGTAAAACTCAAGTATAACCTGGATAATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTACTCTATGCTGAAGGTAAAACTCAAGTATAACCTGGATAATTTA  244

seq1  GTGTGTTTTGATCTTAAAATAATAAGGATAAAAACAGGACTAGCCATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTTGATCTTAAAATAATAAGGATAAAAACAGGACTAGCCATAGA  294

seq1  AAACAATGGTATGGTTTTGTTTGCCTATAGTGTATGAGGCTTTAAATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGGTATGGTTTTGTTTGCCTATAGTGTATGAGGCTTTAAATTGA  344

seq1  ATCCCCTGTATTGCAAATAAATAAATACATACATATATAATACATAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTGTATTGCAAATAAATAAATACATACATATATAATACATAAAAC  394

seq1  TTCAAAAGGATAATATATGGCTACTACCTGAAGGTAAAGATGCTAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAGGATAATATATGGCTACTACCTGAAGGTAAAGATGCTAGAGAA  444

seq1  AAATAATATAAAGAAAAAGAAGGAAGAGGTCAGAAAGGTCAGAAAGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATATAAAGAAAAAGAAGGAAGAGGTCAGAAAGGTCAGAAAGTCCA  494

seq1  TCATATAGGAGCAAAAGAAGGACAGTTCACGATTCTTCTGTTATTCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGGAGCAAAAGAAGGACAGTTCACGATTCTTCTGTTATTCTGTG  544

seq1  GAGGCTTCAACTCTGTAGTGAATCCCCATGGGTCCCTGTTTTGCCGATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTCAACTCTGTAGTGAATCCCCATGGGTCCCTGTTTTGCCGATAG  594

seq1  AATTTCACCCTCTTGTTGCTCTTGTTCTCCTTCTCCACTGTGCTCAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCACCCTCTTGTTGCTCTTGTTCTCCTTCTCCACTGTGCTCAGATG  644

seq1  CTTTTCTCTTTGAACATCTCCAGGGCAAACAAACTCAAGTCAGCACATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTTTGAACATCTCCAGGGCAAACAAACTCAAGTCAGCACATTA  694

seq1  TGGGAATTTGATATCAGTAGAGGTAGAGACTGAAGCTTGCATGACTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTTGATATCAGTAGAGGTAGAGACTGAAGCTTGCATGACTATGT  744

seq1  CCATTCCATCTTCCCCGAACCCTTTGAACATGAAAAACTCACTTGACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCATCTTCCCCGAACCCTTTGAACATGAAAAACTCACTTGACAAT  794

seq1  TACCAATGGTTGTTCTTTCCAACCCAAAGGGATTTCCAAATTAATCACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATGGTTGTTCTTTCCAACCCAAAGGGATTTCCAAATTAATCACTG  844

seq1  GTTATAAAATGTACCTTTCATGGGCAAGTAGGAAATTTCTATTGCAAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAAATGTACCTTTCATGGGCAAGTAGGAAATTTCTATTGCAAGAT  894

seq1  GTGAAAAGGCCTAGAAGGAGAATTC  925
      |||||||||||||||||||||||||
seq2  GTGAAAAGGCCTAGAAGGAGAATTC  919

seq1: chr8_30489832_30490787
seq2: B6Ng01-026I17.g_66_1017

seq1  GAATTCAATATCCCTGGATACAGAAACTTCTATCTTCAATTGAACTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATCCCTGGATACAGAAACTTCTATCTTCAATTGAACTGGTT  50

seq1  GATACTGGAAACAGTTGTATTTTTGTAATGTACTGTTAGACTTATTATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGGAAACAGTTGTATTTTTGTAATGTACTGTTAGACTTATTATGG  100

seq1  TCTATATATCCTCTGGAAGTGTAGCATGTGGTTTTAACTGCTAAGCCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATATCCTCTGGAAGTGTAGCATGTGGTTTTAACTGCTAAGCCATC  150

seq1  TCTCTCTAGGCCCGATATTTTTAGTTCTGAGTAGTTTTTATTGTTTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTAGGCCCGATATTTTTAGTTCTGAGTAGTTTTTATTGTTTTAAT  200

seq1  TTTGAGATTATAATATAATTATATCATTTCCTCATTCCTTTTATCCATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATTATAATATAATTATATCATTTCCTCATTCCTTTTATCCATCC  250

seq1  AAAGTTTCCCATATATACCTCCTTATTTTCTTCAAAACTCATGTTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTCCCATATATACCTCCTTATTTTCTTCAAAACTCATGTTGTTTT  300

seq1  TTTTTTTACTAATTGCTGTTACACAAATACATATGTATTTATGCATATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTACTAATTGCTGTTACACAAATACATATGTATTTATGCATATAC  350

seq1  ATGGATATATACATGTGTGTGTGTGTATGCATATACTCCTAAATAAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATATATACATGTGTGTGTGTGTATGCATATACTCCTAAATAAAGCC  400

seq1  TGTGTAGTCTGAATAATGTTATGTGTCTGTATGTTTTCAGGACTATTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGTCTGAATAATGTTATGTGTCTGTATGTTTTCAGGACTATTTGG  450

seq1  CACTGAATAACTAGTTGATGTGCTCCTTCTTGGAGAAGACTATTTCCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATAACTAGTTGATGTGCTCCTTCTTGGAGAAGACTATTTCCCCC  500

seq1  ACTCTCAGTATCTCATAGTTGCCAGGAGTTCTTTGCATAGTGTTGAGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAGTATCTCATAGTTGCCAGGAGTTCTTTGCATAGTGTTGAGGTC  550

seq1  TCATGGTCTTTTTACCCATCCACATTAGCATGGTCTGTTGTTACATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTCTTTTTACCCATCCACATTAGCATGGTCTGTTGTTACATTTTT  600

seq1  AATAAATTTAAAGAATTATTTATTTTAGATTCATGCATATGTCAGATCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTTAAAGAATTATTTATTTTAGATTCATGCATATGTCAGATCTG  650

seq1  TGTTTTACAGATATTTCCACTAAGACTGGTCATTATTTCTTCTTTGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTACAGATATTTCCACTAAGACTGGTCATTATTTCTTCTTTGTGCA  700

seq1  CTTTTGAACATTTATTTTAATTTACCTGAAATTAAATTGATGGCTTTTAC  750
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTTTGAACATTTATTTTTATTTACCTGAAATTAAATTGATGGCTTTTAC  750

seq1  ATTTATACTTGATGATATTTGTATCTCATTTAAGATGTCTCCACATCCCT  800
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTTATACTTGATGATATTTGTATCTCATTTAAGATGTCTCCACATTCCT  800

seq1  AATTACAATGATCTTGTCATCTGTTTATTGTAAAAGTTCAGAAATTACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAATGATCTTGTCATCTGTTTATTGTAAAAGTTCAGAAATTACTA  850

seq1  TTTAATATAGACTTACCATGAGTAGTTTATATCTAATTTTTGACTACCTG  900
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  TTTAATATAGACTTA-CATGAGTAG-TTATATCTAATTTTTGACTACCTG  898

seq1  GTGTGAAAGGATTTCTTGCAAGTTGCATATCCCTGATGCAGAGCAGTTAT  950
      |||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  GTGTGAAA-GATTTCTTGC-AGTTGCATATCCCTGATGCAGAGCAGTTAT  946

seq1  GGAAAA  956
      ||||||
seq2  GGAAAA  952