BAC Information

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BAC

Clone NameB6Ng01-026I19
Chromosome8 (Build37)
Map Location 29,939,350 - 29,939,853
singlet/doubletsinglet
Overlap geneUnc5d
Upstream geneEG666422, LOC666430, EG666446, LOC100042598
Downstream geneLOC100041237
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026I19.bB6Ng01-026I19.g
ACCDH857562DH857563
length345498
definitionDH857562|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I19, 5' end.DH857563|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctctctctctctctctctctctctctctctctctctctctctctctctc
tctctctctctatctccagaaaggtctctgtttttgtgtttgattttgtg
agagagagaaatatataaaggcagtggcacagaatctctcaacaggaata
aagaggccccttgcctatctacgagccgatagaaagggtacgtttacagg
atgggctggttttaaattagctcgagtgtataaagaacacatttttttct
gtgtgtttttttgtatgcgtgcacacacacacactaaagtgggggacaga
gagtgttgtgcacgtgcactcccgaataggaatacgggggctctt

agatctgctgcctaacagcagacattttaaccactgagccatttctccac
ctccctattcgatttttatttacatatttatatcatttgtttgatacttg
aactgattaagaacagaagaagtatcccattcattgccaaataccttgag
gcaccaaactcatttattaaataaattgaaatctgtggttatgagatttg
agaaccaatcgcataactaactgactatggatagtcactagtctaagata
ttgtactgatggaaaacagatcagcatccaggaggaatgttgtgctatat
gatactgaaaatccattggcagcatgcagatacccacagaatctcttccc
ttacttggcaacttctgggcatagaggaagtgacaattgacagtatagga
ttgtgccaaaggctaaacttgaagtgaaaacaaaacaaaacaaacaaaca
aaaaaaccagggctcctacaatctgggggtggagtaaggtagggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_29939350_29939853
seq2: B6Ng01-026I19.g_68_571

seq1  GAATTCAGATCTGCTGCCTAACAGCAGACATTTTAACCACTGAGCCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCTGCTGCCTAACAGCAGACATTTTAACCACTGAGCCATTT  50

seq1  CTCCACCTCCCTATTCGATTTTTATTTACATATTTATATCATTTGTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCTCCCTATTCGATTTTTATTTACATATTTATATCATTTGTTTGA  100

seq1  TACTTGAACTGATTAAGAACAGAAGAAGTATCCCATTCATTGCCAAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGAACTGATTAAGAACAGAAGAAGTATCCCATTCATTGCCAAATAC  150

seq1  CTTGAGGCACCAAACTCATTTATTAAATAAATTGAAATCTGTGGTTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGCACCAAACTCATTTATTAAATAAATTGAAATCTGTGGTTATGA  200

seq1  GATTTGAGAACCAATCGCATAACTAACTGACTATGGATAGTCACTAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAGAACCAATCGCATAACTAACTGACTATGGATAGTCACTAGTCT  250

seq1  AAGATATTGTACTGATGGAAAACAGATCAGCATCCAGGAGGAATGTTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTGTACTGATGGAAAACAGATCAGCATCCAGGAGGAATGTTGTG  300

seq1  CTATATGATACTGAAAATCCATTGGCAGCATGCAGATACCCACAGAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGATACTGAAAATCCATTGGCAGCATGCAGATACCCACAGAATCT  350

seq1  CTTCCCTTACTTGGCAACTTCTGGGCATAGAGGAAGTGACAATTGACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTACTTGGCAACTTCTGGGCATAGAGGAAGTGACAATTGACAGT  400

seq1  ATAGGATTGTGCCAAAGGCTAAACTTGAAGTGAAAACAAAACAAAACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATTGTGCCAAAGGCTAAACTTGAAGTGAAAACAAAACAAAACAAA  450

seq1  CAAACAAAAAAACCAGGGCTCCTACAATCTGGGGGTGGAGTAAGGTAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAAAAACCAGGGCTCCTACAATCTGGGGGTGGAGTAAGGTAGGG  500

seq1  TGGG  504
      ||||
seq2  TGGG  504


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