BAC Information

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BAC

Clone NameB6Ng01-027C21
Chromosome8 (Build37)
Map Location 105,516,937 - 105,517,343
singlet/doubletsinglet
Overlap geneLOC100041368
Upstream geneCdh11, EG667618
Downstream gene1600027J07Rik, LOC100041397
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027C21.bB6Ng01-027C21.g
ACCDH857998DH857999
length719401
definitionDH857998|Mus musculus domesticus DNA, BAC clone: B6Ng01-027C21, 5' end.DH857999|Mus musculus domesticus DNA, BAC clone: B6Ng01-027C21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttattcttttagtaaatagatgtgcaacacccaaccccacaa
atgcataaatgaatgcagtaacaattttaaagacatgcctatatcttctt
caaagttattagaagtcctatataaaacaaagaaacagagccatcttgac
aatatcagggacatcttcaattcgtggcaggagttctccttgaagacatt
tttggttttagtctgaaatgagtgaagaaagtaaatgagttctgggcagc
aagaacagcattgaaacggccctggacatgggaaggggcttgaacaaaga
agaaacatagccaacgggaaacagagaaatgtgatcgcttcatgactaat
gggaggaagggctgtggcatgagtagaaaatggggaggaaatagaaagtg
gcagctaaagcaggtgattgaggaccacgataaggagttgaaacagctgg
aaaactttggagttaaacagcagaatgaactggtctgattgggctctaag
atcatcaatcttgctgattggtggagaacgcattccaaggggtaagacaa
gggagagttgacaggagattgttgaatttttcctggcaaaagagatggag
gattggagaggtgggtaggcagtaaaaggaactagatgcagagaattgta
gatatgttttcaatagaagaaatcatgagttgagtatgggactggggcta
gggaacactcaagactcct
aaagtgccaagtaggttaattttatattctagttatgtatgtgtgttttc
cacatcagtcaaaatagaaaacccaaagtcatgcagataaaaacacacac
ataaaaggaatacctttaaaccttctatcagaactttctcttctgcagct
tacataataacaacgttttatagcacataactctaacagccaagggagtg
gatcaagagtttgagcaatcctcctaaaggcacacaggagggaagaggtg
ggagttgaaggaaagttcaggcccaccttgattccatggttcttcctcat
ccatagggaatctctgagaaatgatttcagtcatcataagcattggacca
aatagttaactacacatatacatacacacagagagagacggggggggggg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_105516937_105517343
seq2: B6Ng01-027C21.g_66_472

seq1  GAATTCAAAGTGCCAAGTAGGTTAATTTTATATTCTAGTTATGTATGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTGCCAAGTAGGTTAATTTTATATTCTAGTTATGTATGTGT  50

seq1  GTTTTCCACATCAGTCAAAATAGAAAACCCAAAGTCATGCAGATAAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCACATCAGTCAAAATAGAAAACCCAAAGTCATGCAGATAAAAAC  100

seq1  ACACACATAAAAGGAATACCTTTAAACCTTCTATCAGAACTTTCTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATAAAAGGAATACCTTTAAACCTTCTATCAGAACTTTCTCTTCT  150

seq1  GCAGCTTACATAATAACAACGTTTTATAGCACATAACTCTAACAGCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTACATAATAACAACGTTTTATAGCACATAACTCTAACAGCCAAG  200

seq1  GGAGTGGATCAAGAGTTTGAGCAATCCTCCTAAAGGCACACAGGAGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGATCAAGAGTTTGAGCAATCCTCCTAAAGGCACACAGGAGGGAA  250

seq1  GAGGTGGGAGTTGAAGGAAAGTTCAGGCCCACCTTGATTCCATGGTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGGAGTTGAAGGAAAGTTCAGGCCCACCTTGATTCCATGGTTCTT  300

seq1  CCTCATCCATAGGGAATCTCTGAGAAATGATTTCAGTCATCATAAGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCCATAGGGAATCTCTGAGAAATGATTTCAGTCATCATAAGCATT  350

seq1  GGACCAAATAGTTAACTACACATATACATACACACAGAGAGAGACGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAATAGTTAACTACACATATACATACACACAGAGAGAGACGGGGG  400

seq1  GGGGGGG  407
      |||||||
seq2  GGGGGGG  407