BAC Information

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BAC

Clone NameB6Ng01-027H16
Chromosome8 (Build37)
Map Location 52,677,421 - 52,678,199
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039966, LOC667517
Downstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027H16.bB6Ng01-027H16.g
ACCDH858211DH858212
length1,2451,023
definitionDH858211|Mus musculus domesticus DNA, BAC clone: B6Ng01-027H16, 5' end.DH858212|Mus musculus domesticus DNA, BAC clone: B6Ng01-027H16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaatcgggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagcgccattttcccggttcggaatcttcct
gagaagcaagcaataaagcttttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagcgggacgcaataccaaaaagtagtttgtgtata
tttattatatgccttccagatatccctgcatccagttgagaactccactt
ctatgttgaggctggaccatgattaaaataaaagaaaaaaaaaagaaaga
aaaagaaaaacattagaactaagcaggtcacaacaaacccaaaagaagag
aagcatacacacataataccaactcagcaacagcaacagcaacagcagca
gcagcaacaacaacaacaaaacaggaactaacaataatctctctttaata
tctcagaacatcagaggatacaatgccccaataaaaagatataggctaac
agactggatacaaaagcaggagtgaacatttgctttgtcactcagtgaca
ctacatcagagtaaaaggctgaatttttttcccaagcaaatggtaacaag
aaacaagcaggagttgcctttctagaagctaataaaccagaattgaaacc
agaagttatcaaacatgatggagaagaaaatttcatattcatcaaagaaa
aactacaagaagaggaagtctcaattttgaacattaataccccaaatgca
agggcaagcacatttataaaagaaacattcctgaagctcaaaacacaact
agaaactcacataatcatagtggaagactttaataccctcctttcccatg
gaaaagtcactgaaccagaatttaatagacacaatgaaactaaaagaagt
tatgaaccaatggattttacagatatctaagaacacttcacccccaacag
gaaaataaacttcttctatcaccttgtgtaacctctcaacctgacaatta
tggacataaagctgacagattagatgaaaaatccctgcattccttcgatc
cattggtaggcagacttctatatgccaaccacgataggacactttcctga
attaacaccttctcgtctcagtaattgatcggaagaacataatcggactt
aaattcatggaatggaggactatcataccagttatgtcttcatga
gaattccacgggttattttgatgtgcattttcctgatgactaagaatatt
gaaccctttttaggtggttctcatcatttgatattcctcagttgagaatt
ctttgtttagctctgtacaccatttttaatagagtgatttggttctctgg
agtttaacctcttgagttctttgaatatattggctatttaccttctatca
gatgaaggattggtaaagatcttttcccaatctgttggttgccattttgt
cctattgacagcatcctttgtcttacagacactttgcaattttatgaggt
cccaattgttgatggttgatcttagagcataaggtatcgatgttctgttc
aggaaattttctcttgtgcccatgtgctcaaggctctcccccactttctc
ttctattagtttcagtctatctgattttatgtggaggtccttgatccact
ttgacttgagctttgtacaaaaagataacagtggctcaatctgcattctt
ctatatgctaaccaccagttgagccaacaccatttgttgaaaatgctgtc
ttttttctactggatggttttagatcctttgtgaaagatcacgtggtcat
aggtgtgtgggttcctttctgggtcttcaagtctattccactgatgtacc
tgcctgtctttgtaacaatgccctacagtctgtaccactatttctcggta
atacaccttgaggtcagggatggtgattcccccagaaattcctccttctt
gatacataagaaaagtgggagtatcttacttacaaagtaagtagctacat
ctccactgagagtgagtacaattgattagttattaatttccatgaatgga
tcatcaaaatacatgaaggttttttttctttattcttttttacactcagt
cttattgccatctgggttgctctctgatggtctacatcccataactcctc
cctgtcccctgtctcagaggatgccccaaccccataccaccccaccagac
tttctatcttccatagggcttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52677421_52678199
seq2: B6Ng01-027H16.g_320_1090

seq1  TATTGACAGCATCCTTTGTCTTACAGACACTTTGCAATTTTATGAGGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACAGCATCCTTTGTCTTACAGACACTTTGCAATTTTATGAGGTCC  50

seq1  CAATTGTTGATGGTTGATCTTAGAGCATAAGGTATCGATGTTCTGTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTTGATGGTTGATCTTAGAGCATAAGGTATCGATGTTCTGTTCAG  100

seq1  GAAATTTTCTCTTGTGCCCATGTGCTCAAGGCTCTCCCCCACTTTCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTCTCTTGTGCCCATGTGCTCAAGGCTCTCCCCCACTTTCTCTT  150

seq1  CTATTAGTTTCAGTCTATCTGATTTTATGTGGAGGTCCTTGATCCACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAGTTTCAGTCTATCTGATTTTATGTGGAGGTCCTTGATCCACTTT  200

seq1  GACTTGAGCTTTGTACAAAAAGATAACAGTGGCTCAATCTGCATTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAGCTTTGTACAAAAAGATAACAGTGGCTCAATCTGCATTCTTCT  250

seq1  ATATGCTAACCACCAGTTGAGCCAACACCATTTGTTGAAAATGCTGTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTAACCACCAGTTGAGCCAACACCATTTGTTGAAAATGCTGTCTT  300

seq1  TTTTCTACTGGATGGTTTTAGATCCTTTGTGAAAGATCACGTGGTCATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACTGGATGGTTTTAGATCCTTTGTGAAAGATCACGTGGTCATAG  350

seq1  GTGTGTGGGTTCCTTTCTGGGTCTTCAAGTCTATTCCACTGATGTACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGGGTTCCTTTCTGGGTCTTCAAGTCTATTCCACTGATGTACCTG  400

seq1  CCTGTCTTTGTAACAATGCCCTACAGTCTGTACCACTATTTCTCGGTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTTGTAACAATGCCCTACAGTCTGTACCACTATTTCTCGGTAAT  450

seq1  ACACCTTGAGGTCAGGGATGGTGATTCCCCCAGAAATTCCTCCTTCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTGAGGTCAGGGATGGTGATTCCCCCAGAAATTCCTCCTTCTTGA  500

seq1  TACATAAGAAAAGTGGGAGTATCTTACTTACAAAGTAAGTAGCTACATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGAAAAGTGGGAGTATCTTACTTACAAAGTAAGTAGCTACATCT  550

seq1  CCACTGAGAGTGAGTACAATTGATTTAGTTATTAATTTCCATGAAT-GAT  599
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  CCACTGAGAGTGAGTACAATTGA-TTAGTTATTAATTTCCATGAATGGAT  599

seq1  CATCAAAATACATGAAGGTTTTTTTTCTTTATTCTTTTTTACACTCCAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATCAAAATACATGAAGGTTTTTTTTCTTTATTCTTTTTTACACT-CAGT  648

seq1  CTTTATTGCCATTCTGGTTTGCTCTCTGATTGTTCTACATCCCATATCTC  699
      | ||||||||| ||||| ||||||||||| || ||||||||||||| |||
seq2  C-TTATTGCCA-TCTGGGTTGCTCTCTGA-TGGTCTACATCCCATAACTC  695

seq1  CTCCCTGTCCCCCTGTCTCTAAGAGGATGCCCCAACCTCCATCACCACCC  749
      |||||||| ||||||||||  |||||||||||||||| |||| |||||||
seq2  CTCCCTGT-CCCCTGTCTC--AGAGGATGCCCCAACC-CCAT-ACCACCC  740

seq1  CACCAGACTTTC-CTACTCCCTAGGGCTTCA  779
      ||||||||||||  |  ||| ||||||||||
seq2  CACCAGACTTTCTATCTTCCATAGGGCTTCA  771