BAC Information

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BAC

Clone NameB6Ng01-028O23
Chromosome8 (Build37)
Map Location 33,392,822 - 33,473,693
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589
Downstream geneEG546052, LOC100042715, LOC628408, EG628412, Wrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028O23.bB6Ng01-028O23.g
ACCDH859275DH859276
length1,1061,035
definitionDH859275|Mus musculus domesticus DNA, BAC clone: B6Ng01-028O23, 5' end.DH859276|Mus musculus domesticus DNA, BAC clone: B6Ng01-028O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,472,579 - 33,473,693)(33,392,822 - 33,393,871)
sequence
gaattcaacatgtacaaatgatctccaaccaattttaaaatagtccaatc
tcttctgtacgtggtatttactttctgtgagacatgtgtacagctactag
gactattttctctgaagagaattgccattaaacatttggaacttttaatt
aatcaggaaattaaacttccccaaatcttgtttgatcccagtatctgggg
actgatgagacccattaagttttatgatttggtggaagcatttcttgtat
aagaagaatgtgccagaattgagttcattttacctgatatttattttgtg
aaaaaagggaccacttatcaattattcaacctattattctgagtaaactt
tttttgggggggggtttctttcgttttcttttttttattttttagatatt
ttcttttttaatctttaaatattttaacaacaaagaacaacttatgatat
gtattttacacaggacatacaggtattatctttattttacagctgaaaca
taatcacacgggctacttgacctctaatgaggttatggtgaataccatat
agactaaaagctaccatagtgtctgatattacaaggaaatcttgtatgag
attatttatcttttaaatccaaactgaatttggcaataatgttaccaatc
tcttttccgatgttattgcattgttttttattagcttttttctttattta
catttcaaatgttatcccctttcatagtttcccctccaaaaatcccctac
tcccccttgctccccaacgcacccactcccattcctggtcctggcattcc
cctatactggggcatagagccttcataggaccaagggtttctcctcccat
tgatgaccgactaggccatcctctgctacatatacagctagagccacaag
ttccaccatgtgttttctttgattggtgtatagttccaaagagctctgaa
ggactggttagttcatatgatgtttctcctatgggacttcaggccccttc
agctcctgggatcattcctcagctctttcagtaccttctccactcttcat
caggaactgaaactcatcaatggatgctgtgagccatccacttctgtatt
tccagg
gaattctataattcttatgtagaaggataagatatgtattttattggaga
atcaaaaccttttgtgtaaaagtttccaggagaagtttattatgtaggtc
tcggagcaaataacctctttgtacaagaagacctttgaatagttttctca
acattagaaagtgaaaatgcgatttacctgtgaacattcctaaaaacaat
agagatgggggggggagacttagtgatctccttcactaagtggctaaaga
caacaaaataaattttgataacccattttatatgaggtagaattctgggc
ggtcacaccgctttctttgtggtccaacagaagggccttagcaacattgt
acacagtccaaggtgtaccttcctatctaccctataaatataattcactg
atataatttttagtgatctatcttattttttgagcaatatattatgttgt
ttcataaagtattgccataatttctaaaagcatgggacactttgagaaag
tgagtctttgcacttatattggactcaaacctatctgcatgagtctaccc
actttcccttccccactctcgatcaatccctccctccttcagtgtttccc
tccctaccaccatgctgcccatagcctttctttccaacctcccaacctcc
ctccctccctccctctccccttctctcctcttctcttcctccctcccttc
cttccttccttccttcactcccctctctgaagagaacttcagtgacccaa
gtcaggaagcttttgaaaaatacctttgctcctaagcacctggtcataca
caaaagtaatgtgtattggagcaaaaggcatagtttgaaaacataaactt
aaaggtgactctatttacaatgataacaaatgccccagatcaagcacact
ccaaagtgtcctctctccatcacacgaagagctacttttctctcaaagtg
agtacagtcacacctataatttgttctgtggcttacagagtcagctttct
tgaaatatagcactctatatacagaatgatagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_33472579_33473693
seq2: B6Ng01-028O23.b_47_1152 (reverse)

seq1  CCTGGAAAATACAGAAGTGGAT-GCTCACAGCCATCCATTGGATGAAGCT  49
      ||||| |||||||||||||||| |||||||| |||||||| |||||   |
seq2  CCTGG-AAATACAGAAGTGGATGGCTCACAG-CATCCATT-GATGAGTTT  47

seq1  CAGGTTCCCTGATGGAGGAGTTGGAGAAGGTACTGAAAGAGCTGAGGGAA  99
      |||  | |||||| || ||| |||||||||||||||||||||||| ||||
seq2  CAG--TTCCTGAT-GAAGAG-TGGAGAAGGTACTGAAAGAGCTGA-GGAA  92

seq1  AGTACCCAGGGAGCTGAAGGGGCCTGAAGTCCCATAGGAGAAACATCAAT  149
       |  |||| |||||||||||||||||||||||||||||||||||||| ||
seq2  TGATCCCA-GGAGCTGAAGGGGCCTGAAGTCCCATAGGAGAAACATC-AT  140

seq1  ATGAACTAACCAGTCCTTCAGAGCTCTTTGGAACTATACACCAATCAAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTAACCAGTCCTTCAGAGCTCTTTGGAACTATACACCAATCAAAG  190

seq1  AAAACACATGGTGGAACTTGTGGCTCTAGCTGTATATGTAGCAGAGGATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACATGGTGGAACTTGTGGCTCTAGCTGTATATGTAGCAGAGGATG  240

seq1  GCCTAGTCGGTCATCAATGGGAGGAGAAACCCTTGGTCCTATGAAGGCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTCGGTCATCAATGGGAGGAGAAACCCTTGGTCCTATGAAGGCTC  290

seq1  TATGCCCCAGTATAGGGGAATGCCAGGACCAGGAATGGGAGTGGGTGCGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCCAGTATAGGGGAATGCCAGGACCAGGAATGGGAGTGGGTGCGT  340

seq1  TGGGGAGCAAGGGGGAGTAGGGGATTTTTGGAGGGGAAACTATGAAAGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGCAAGGGGGAGTAGGGGATTTTTGGAGGGGAAACTATGAAAGGG  390

seq1  GATAACATTTGAAATGTAAATAAAGAAAAAAGCTAATAAAAAACAATGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACATTTGAAATGTAAATAAAGAAAAAAGCTAATAAAAAACAATGCA  440

seq1  ATAACATCGGAAAAGAGATTGGTAACATTATTGCCAAATTCAGTTTGGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATCGGAAAAGAGATTGGTAACATTATTGCCAAATTCAGTTTGGAT  490

seq1  TTAAAAGATAAATAATCTCATACAAGATTTCCTTGTAATATCAGACACTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGATAAATAATCTCATACAAGATTTCCTTGTAATATCAGACACTA  540

seq1  TGGTAGCTTTTAGTCTATATGGTATTCACCATAACCTCATTAGAGGTCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCTTTTAGTCTATATGGTATTCACCATAACCTCATTAGAGGTCAA  590

seq1  GTAGCCCGTGTGATTATGTTTCAGCTGTAAAATAAAGATAATACCTGTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCGTGTGATTATGTTTCAGCTGTAAAATAAAGATAATACCTGTAT  640

seq1  GTCCTGTGTAAAATACATATCATAAGTTGTTCTTTGTTGTTAAAATATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTGTAAAATACATATCATAAGTTGTTCTTTGTTGTTAAAATATTT  690

seq1  AAAGATTAAAAAAGAAAATATCTAAAAAATAAAAAAAAGAAAACGAAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTAAAAAAGAAAATATCTAAAAAATAAAAAAAAGAAAACGAAAGA  740

seq1  AACCCCCCCCCAAAAAAAGTTTACTCAGAATAATAGGTTGAATAATTGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCCCCCAAAAAAAGTTTACTCAGAATAATAGGTTGAATAATTGAT  790

seq1  AAGTGGTCCCTTTTTTCACAAAATAAATATCAGGTAAAATGAACTCAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTCCCTTTTTTCACAAAATAAATATCAGGTAAAATGAACTCAATT  840

seq1  CTGGCACATTCTTCTTATACAAGAAATGCTTCCACCAAATCATAAAACTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACATTCTTCTTATACAAGAAATGCTTCCACCAAATCATAAAACTT  890

seq1  AATGGGTCTCATCAGTCCCCAGATACTGGGATCAAACAAGATTTGGGGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTCTCATCAGTCCCCAGATACTGGGATCAAACAAGATTTGGGGAA  940

seq1  GTTTAATTTCCTGATTAATTAAAAGTTCCAAATGTTTAATGGCAATTCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATTTCCTGATTAATTAAAAGTTCCAAATGTTTAATGGCAATTCTC  990

seq1  TTCAGAGAAAATAGTCCTAGTAGCTGTACACATGTCTCACAGAAAGTAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGAAAATAGTCCTAGTAGCTGTACACATGTCTCACAGAAAGTAAA  1040

seq1  TACCACGTACAGAAGAGATTGGACTATTTTAAAATTGGTTGGAGATCATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACGTACAGAAGAGATTGGACTATTTTAAAATTGGTTGGAGATCATT  1090

seq1  TGTACATGTTGAATTC  1115
      ||||||||||||||||
seq2  TGTACATGTTGAATTC  1106

seq1: chr8_33392822_33393871
seq2: B6Ng01-028O23.g_68_1102

seq1  GAATTCTATAATTCTTATGTAGAAGGATAAGATATGTATTTTATTGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAATTCTTATGTAGAAGGATAAGATATGTATTTTATTGGAGA  50

seq1  ATCAAAACCTTTTGTGTAAAAGTTTCCAGGAGAAGTTTATTATGTAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACCTTTTGTGTAAAAGTTTCCAGGAGAAGTTTATTATGTAGGTC  100

seq1  TCGGAGCAAATAACCTCTTTGTACAAGAAGACCTTTGAATAGTTTTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGCAAATAACCTCTTTGTACAAGAAGACCTTTGAATAGTTTTCTCA  150

seq1  ACATTAGAAAGTGAAAATGCGATTTACCTGTGAACATTCCTAAAAACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGAAAGTGAAAATGCGATTTACCTGTGAACATTCCTAAAAACAAT  200

seq1  AGAGATGGGGGGGGGAGACTTAGTGATCTCCTTCACTAAGTGGCTAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGGGGGGGGAGACTTAGTGATCTCCTTCACTAAGTGGCTAAAGA  250

seq1  CAACAAAATAAATTTTGATAACCCATTTTATATGAGGTAGAATTCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAATAAATTTTGATAACCCATTTTATATGAGGTAGAATTCTGGGC  300

seq1  GGTCACACCGCTTTCTTTGTGGTCCAACAGAAGGGCCTTAGCAACATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACACCGCTTTCTTTGTGGTCCAACAGAAGGGCCTTAGCAACATTGT  350

seq1  ACACAGTCCAAGGTGTACCTTCCTATCTACCCTATAAATATAATTCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTCCAAGGTGTACCTTCCTATCTACCCTATAAATATAATTCACTG  400

seq1  ATATAATTTTTAGTGATCTATCTTATTTTTTGAGCAATATATTATGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTTTTAGTGATCTATCTTATTTTTTGAGCAATATATTATGTTGT  450

seq1  TTCATAAAGTATTGCCATAATTTCTAAAAGCATGGGACACTTTGAGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAAGTATTGCCATAATTTCTAAAAGCATGGGACACTTTGAGAAAG  500

seq1  TGAGTCTTTGCACTTATATTGGACTCAAACCTATCTGCATGAGTCTACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTTTGCACTTATATTGGACTCAAACCTATCTGCATGAGTCTACCC  550

seq1  ACTTTCCCTTCCCCACTCTCGATCAATCCCTCCCTCCTTCAGTGTTTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCCTTCCCCACTCTCGATCAATCCCTCCCTCCTTCAGTGTTTCCC  600

seq1  TCCCTACCACCATGCTGCCCATAGCCTTTCTTTCCAACCTCCCAACCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACCACCATGCTGCCCATAGCCTTTCTTTCCAACCTCCCAACCTCC  650

seq1  CTCCCTCCCTCCCTCTCCCCTTCTCTCCTCTTCTCTTCCTCCCTCCCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCCTCCCTCTCCCCTTCTCTCCTCTTCTCTTCCTCCCTCCCTTC  700

seq1  CTTCCTTCCTTCCTTCACTCCCCTCTCTGAAGAGAACTTCAGTGACCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCCTTCACTCCCCTCTCTGAAGAGAACTTCAGTGACCCAA  750

seq1  GTCAGGAAGCTTTTGAAAAATACCTTTGCTCCTAAGCACCTGGTCATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAAGCTTTTGAAAAATACCTTTGCTCCTAAGCACCTGGTCATACA  800

seq1  CAAAAGTAATGTGTATTGGAGCAAAAGGCATAGTTTGAAAACATAAACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTAATGTGTATTGGAGCAAAAGGCATAGTTTGAAAACATAAACTT  850

seq1  AAAGGTGACTCTATTTACAATGATAACAAATGCCCCAGATCAAGCACACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAGGTGACTCTATTTACAATGATAACAAATGCCCCAGATCAAGCACACT  900

seq1  CCAAAGTGTCCTCTCTCCATCACCACGAAGAGCTACTTTTCTCTCCAAAG  950
      |||||||||||||||||||||| ||||||||||||||||||||| |||||
seq2  CCAAAGTGTCCTCTCTCCATCA-CACGAAGAGCTACTTTTCTCT-CAAAG  948

seq1  GGAGTAACAGTCACAACCTATTAATTTGGTTCTGTTGCTTAACAGAAGTC  1000
       |||| |||||||| ||||| |||||| ||||||| |||| |||| ||||
seq2  TGAGT-ACAGTCAC-ACCTA-TAATTT-GTTCTGTGGCTT-ACAG-AGTC  992

seq1  AAGCTTTCTTTGAAATTATCAGCACTCTATAATACAGAAATGGATAGTGA  1050
       ||||||| |||||| ||| |||||||||| ||||||||   ||||||||
seq2  -AGCTTTC-TTGAAA-TAT-AGCACTCTAT-ATACAGAA--TGATAGTGA  1035