BAC Information

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BAC

Clone NameB6Ng01-029D19
Chromosome8 (Build37)
Map Location 34,869,155 - 35,020,206
singlet/doubletdoublet
Overlap geneGtf2e2, Rbpms
Upstream geneLOC100042715, LOC628408, EG628412, Wrn, Purg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr
Downstream geneLOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66, LOC619780, LOC666718, EG234159, LOC666746, Dusp4, LOC675578, Tnks
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029D19.bB6Ng01-029D19.g
ACCDH859493DH859494
length683913
definitionDH859493|Mus musculus domesticus DNA, BAC clone: B6Ng01-029D19, 5' end.DH859494|Mus musculus domesticus DNA, BAC clone: B6Ng01-029D19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,869,155 - 34,869,839)(35,019,290 - 35,020,206)
sequence
gaattctcttagaagacatagaagagggactgcctaattcccagaaagct
gtcaaggtaatgtttcttttcctcctgtatcataactataatttgaatta
gtaatgttgtggttttttattttcctgagacagggtcttactatgtatgt
agccctggttgtcctggaactgagagatctgtgtgcctttacccctgaaa
gtgggggttaccatgaaaggtggctaccatgcccagcttcttatgctttt
ttttttggttttttttgtttttcgagacaggctttctctgtgcagccctg
gctgtcctggaactcactctgtagaccaggctgtcctggaactcagaata
tccgcctgcctctgcctcccgagtgctgagattaaaggcatgtgccacca
tgcccggcgcttcttatgattttaagatacacttgtttttatgcgtgtat
ctttgggtagctgcccatgtcaaggaaaggagagggtgttggatcccctg
gagctaaagctcacactgcctgctgggaactgaacttgggtcctttggaa
gagtagcaagggcttttaacttgagtcatctttctagtctgctcttcatg
gttttaaacttgagagagagagagagagagagagagagagagagagagag
agagagagagaaagaagaggaggggagaggagg
gaattcacttcgccttggcatgttctacccttaatagtacttgagtgtga
attcccgttgcgttcctggggtaactgaatttttatgcatctggcacttt
tctcagagtaactgaaagctctttggcgactcagtgcctgccttcttttc
ttgaattcaggttgatagatggcgaagggaacgttgatgccttgggaggc
cggatgagtcccctgggatgctggaatggtatttgctgaggacaggccgg
cagcctggcattgccctggcctttctgggggaatgtagaaattgttagag
acacagtattcctgcctatttggaaggaccccagtgagcacatgaagtga
caggatagtggctggagattggatatagttggacagtactgagaaaagtg
cacgtgggatgagctgagagatagagctggggtgaagtcggtcttgggga
agaagtacgggctttggggaaagtgttaagatttaaataggcagagacgt
gggccccagagtctgagagtttcatagtccgtaaagaattgggaagtgga
ggggttggagagatgagacaggactagctgcccttcgggaaggatagggg
ttctattcccagcatccatgcacagctagccttcccagggatttgatgcc
ctcttctggcttctgcagacactagcacacatgtgctatgcatactcaca
ctgacagaacacttgtgcatacgataaaaaaaaaagagttggaaaataaa
ggcaaagatagggcagggcaaagttgagtctgtctagactcttttgtgtg
aacaggagccagggggtggtacacgtttggatactttaaagaattttgtt
tgaatgtttgttgttttcagacaggttctctgtgtagccctggctggcct
gatactcactctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_34869155_34869839
seq2: B6Ng01-029D19.b_46_728

seq1  GAATTCTCTTAGAAGACATAGAAGAGGGACTGCCTAATTCCCAGAAAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAGAAGACATAGAAGAGGGACTGCCTAATTCCCAGAAAGCT  50

seq1  GTCAAGGTAATGTTTCTTTTCCTCCTGTATCATAACTATAATTTGAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGTAATGTTTCTTTTCCTCCTGTATCATAACTATAATTTGAATTA  100

seq1  GTAATGTTGTGGTTTTTTATTTTCCTGAGACAGGGTCTTACTATGTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTTGTGGTTTTTTATTTTCCTGAGACAGGGTCTTACTATGTATGT  150

seq1  AGCCCTGGTTGTCCTGGAACTGAGAGATCTGTGTGCCTTTACCCCTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGTTGTCCTGGAACTGAGAGATCTGTGTGCCTTTACCCCTGAAA  200

seq1  GTGGGGGTTACCATGAAAGGTGGCTACCATGCCCAGCTTCTTATGCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGTTACCATGAAAGGTGGCTACCATGCCCAGCTTCTTATGCTTTT  250

seq1  TTTTTTGGTTTTTTTTGTTTTTCGAGACAGGCTTTCTCTGTGCAGCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTTTTTTTTGTTTTTCGAGACAGGCTTTCTCTGTGCAGCCCTG  300

seq1  GCTGTCCTGGAACTCACTCTGTAGACCAGGCTGTCCTGGAACTCAGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGGAACTCACTCTGTAGACCAGGCTGTCCTGGAACTCAGAATA  350

seq1  TCCGCCTGCCTCTGCCTCCCGAGTGCTGAGATTAAAGGCATGTGCCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCCTGCCTCTGCCTCCCGAGTGCTGAGATTAAAGGCATGTGCCACCA  400

seq1  TGCCCGGCGCTTCTTATGATTTTAAGATACACTTGTTTTTATGCGTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCGGCGCTTCTTATGATTTTAAGATACACTTGTTTTTATGCGTGTAT  450

seq1  CTTTGGGTAGCTGCCCATGTCAAGGAAAGGAGAGGGTGTTGGATCCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGTAGCTGCCCATGTCAAGGAAAGGAGAGGGTGTTGGATCCCCTG  500

seq1  GAGCTAAAGCTCACACTGCCTGCTGGGAACTGAACTTGGGTCCTTTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAAGCTCACACTGCCTGCTGGGAACTGAACTTGGGTCCTTTGGAA  550

seq1  GAGTAGCAAGGGCTTTTAACTTGAGTCATCTTTCTAGTCTGCTCTTCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCAAGGGCTTTTAACTTGAGTCATCTTTCTAGTCTGCTCTTCATG  600

seq1  GTTTTAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  650
      |||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAACTT--GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  648

seq1  AGAGAGAGAGAGAAAGAAGAGGAGGGGAGAGGAGG  685
      |||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAAAGAAGAGGAGGGGAGAGGAGG  683

seq1: chr8_35019290_35020206
seq2: B6Ng01-029D19.g_66_978 (reverse)

seq1  CAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGA  50
      ||||||||||  |||| |||||||||||||||||||||  |||||| |||
seq2  CAGAGTGAGTATCAGGCCAGCCAGGGCTACACAGAGAA--CCTGTC-TGA  47

seq1  AAACAAACAAACAATCAAACAAAATTCTTTAAAGTATCCAAACGTGTACC  100
      |||| |||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAC-AACAAACATTCAAACAAAATTCTTTAAAGTATCCAAACGTGTACC  96

seq1  ACCCCCTGGCTCCCTGTTCACACAAAAG-GTCTAGACAGACTCAACTTTG  149
      ||||||||||| |||||||||||||||| |||||||||||||||||||||
seq2  ACCCCCTGGCT-CCTGTTCACACAAAAGAGTCTAGACAGACTCAACTTTG  145

seq1  CCCTGCCCTATCTTTGCCTTTATTTTCCAACTCTTTTTTTTTTATCGTAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCCTATCTTTGCCTTTATTTTCCAACTCTTTTTTTTTTATCGTAT  195

seq1  GCACAAGTGTTCTGTCAGTGTGAGTATGCATAGCACATGTGTGCTAGTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGTGTTCTGTCAGTGTGAGTATGCATAGCACATGTGTGCTAGTGT  245

seq1  CTGCAGAAGCCAGAAGAGGGCATCAAATCCCTGGGAAGGCTAGCTGTGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAAGCCAGAAGAGGGCATCAAATCCCTGGGAAGGCTAGCTGTGCA  295

seq1  TGGATGCTGGGAATAGAACCCCTATCCTTCCCGAAGGGCAGCTAGTCCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTGGGAATAGAACCCCTATCCTTCCCGAAGGGCAGCTAGTCCTG  345

seq1  TCTCATCTCTCCAACCCCTCCACTTCCCAATTCTTTACGGACTATGAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTCTCCAACCCCTCCACTTCCCAATTCTTTACGGACTATGAAAC  395

seq1  TCTCAGACTCTGGGGCCCACGTCTCTGCCTATTTAAATCTTAACACTTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGACTCTGGGGCCCACGTCTCTGCCTATTTAAATCTTAACACTTTC  445

seq1  CCCAAAGCCCGTACTTCTTCCCCAAGACCGACTTCACCCCAGCTCTATCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGCCCGTACTTCTTCCCCAAGACCGACTTCACCCCAGCTCTATCT  495

seq1  CTCAGCTCATCCCACGTGCACTTTTCTCAGTACTGTCCAACTATATCCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTCATCCCACGTGCACTTTTCTCAGTACTGTCCAACTATATCCAA  545

seq1  TCTCCAGCCACTATCCTGTCACTTCATGTGCTCACTGGGGTCCTTCCAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCCACTATCCTGTCACTTCATGTGCTCACTGGGGTCCTTCCAAA  595

seq1  TAGGCAGGAATACTGTGTCTCTAACAATTTCTACATTCCCCCAGAAAGGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGGAATACTGTGTCTCTAACAATTTCTACATTCCCCCAGAAAGGC  645

seq1  CAGGGCAATGCCAGGCTGCCGGCCTGTCCTCAGCAAATACCATTCCAGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCAATGCCAGGCTGCCGGCCTGTCCTCAGCAAATACCATTCCAGCA  695

seq1  TCCCAGGGGACTCATCCGGCCTCCCAAGGCATCAACGTTCCCTTCGCCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGGACTCATCCGGCCTCCCAAGGCATCAACGTTCCCTTCGCCAT  745

seq1  CTATCAACCTGAATTCAAGAAAAGAAGGCAGGCACTGAGTCGCCAAAGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAACCTGAATTCAAGAAAAGAAGGCAGGCACTGAGTCGCCAAAGAG  795

seq1  CTTTCAGTTACTCTGAGAAAAGTGCCAGATGCATAAAAATTCAGTTACCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGTTACTCTGAGAAAAGTGCCAGATGCATAAAAATTCAGTTACCC  845

seq1  CAGGAACGCAACGGGAATTCACACTCAAGTACTATTAAGGGTAGAACATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACGCAACGGGAATTCACACTCAAGTACTATTAAGGGTAGAACATG  895

seq1  CCAAGGCGAAGTGAATTC  917
      ||||||||||||||||||
seq2  CCAAGGCGAAGTGAATTC  913