BAC Information

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BAC

Clone NameB6Ng01-029H24
Chromosome8 (Build37)
Map Location 114,685,863 - 114,814,364
singlet/doubletdoublet
Overlap geneLOC100042040
Upstream geneGlg1, Rfwd3, LOC547023, Mlkl, Fa2h, Wdr59, Znrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498
Downstream geneCntnap4, LOC100042061
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029H24.bB6Ng01-029H24.g
ACCDH859685DH859686
length1,105484
definitionDH859685|Mus musculus domesticus DNA, BAC clone: B6Ng01-029H24, 5' end.DH859686|Mus musculus domesticus DNA, BAC clone: B6Ng01-029H24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,685,863 - 114,686,977)(114,813,875 - 114,814,364)
sequence
gaattctttgagcatccaggaaacaaagcctggtgaggcatttgcatgcg
gggactgtgtgctttgggtacatattcatgtgtgtgtgtgagggcatgtg
tgtgcgttgggtacatattcatgtgtgtgtgtgtgtgcaaggcagaagtc
aaccttggctattgttcctcaggcaccattctgttttttttcttttaaat
aaataatgtaccactcttttaaaatgtctattatattattgaatgtgtgt
atatgcacacatgtgcacgctgtggtctatgtatgaaagtcagagggaaa
tttttaggagttgattctatccttctgccatataggttttgggaattact
ctcaggtcctcaggcttggcaaattccgttacccaatgagtcatcccacc
ggctccacctggttttgttgggctggagttgctgtgtaaactggattggc
tggccagtgagcctcagaggttcacttgtctcctcctcttctaccctgag
attataagcacataccgccatgctaggctttttgtgggaggttctcgcgg
tttgaattcacatccttgtgcttgcaaggcaaatattttaccaactgggc
tatctctctagcctctaagtcatttagtttaaaaaaaaaaacaaccaaat
ttggcatttgacttgttgatattaatagcaaaaatatattatagaagacc
ctgaggtagcaaaattaagaaattccaggaaaagcatggagaatattgta
tcctgtgtagctaattgacattcagtgttaaacctagcatctcaatgatg
agcatttgaaatttctgggcacaatttttccctcatgagctctctgtgaa
aaatctcttggagcatttgctttagggcgtggctccctcacatacagcca
gatgcatatatattaggatggctttaccaggcaaggctggtagactccat
caggttgaaactcttcagacatatgacctggtacagtcacaataggtagc
cattctaagaatgacggaagagaagaaaccagttataagagacctattcc
tacctgtgacttgttttggacactggttctgggggagatgttaagtgtct
ctcac
aaaaatcaatccatactgaggagctacccacgggccgcatagctaatcag
tggtgaagggatgagtctgattgcagagttcagaagcaaaagcgctgtac
tgtggggagcaaggtgggagaggacaaagctcatctgacagtgatctggt
cgtctgggggctgaggcccccttctgatagctgaggaccctgtctgacag
tgatctggtcgtctgggggctgaggaccctgtctgacagtgatctggtcg
tctgggggctgaggaccctgtctgacagtgatctggtcgtctgggggctg
aggacctccttttcagactcagctttaacactcatcttactgttttgtga
ggcatttgtttaatgtatggctttccccaccagatcgtggttgttcctgt
agcgcggaacacgagatacggtgcggttatgtattatttggcaaatggat
ggaaaaagaaggagagagtgggaaggaagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_114685863_114686977
seq2: B6Ng01-029H24.b_45_1149

seq1  GAATTCTTTGAGCATCCAGGAAACAAAGCCTGGTGAGGCATTTGCATGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAGCATCCAGGAAACAAAGCCTGGTGAGGCATTTGCATGCG  50

seq1  GGGACTGTGTGCTTTGGGTACATATTCATGTGTGTGTGTGAGGGCATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGTGTGCTTTGGGTACATATTCATGTGTGTGTGTGAGGGCATGTG  100

seq1  TGTGCGTTGGGTACATATTCATGTGTGTGTGTGTGTGCAAGGCAGAAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGTTGGGTACATATTCATGTGTGTGTGTGTGTGCAAGGCAGAAGTC  150

seq1  AACCTTGGCTATTGTTCCTCAGGCACCATTCTGTTTTTTTTCTTTTAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGGCTATTGTTCCTCAGGCACCATTCTGTTTTTTTTCTTTTAAAT  200

seq1  AAATAATGTACCACTCTTTTAAAATGTCTATTATATTATTGAATGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGTACCACTCTTTTAAAATGTCTATTATATTATTGAATGTGTGT  250

seq1  ATATGCACACATGTGCACGCTGTGGTCTATGTATGAAAGTCAGAGGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCACACATGTGCACGCTGTGGTCTATGTATGAAAGTCAGAGGGAAA  300

seq1  TTTTTAGGAGTTGATTCTATCCTTCTGCCATATAGGTTTTGGGAATTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGAGTTGATTCTATCCTTCTGCCATATAGGTTTTGGGAATTACT  350

seq1  CTCAGGTCCTCAGGCTTGGCAAATTCCGTTACCCAATGAGTCATCCCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTCCTCAGGCTTGGCAAATTCCGTTACCCAATGAGTCATCCCACC  400

seq1  GGCTCCACCTGGTTTTGTTGGGCTGGAGTTGCTGTGTAAACTGGATTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCACCTGGTTTTGTTGGGCTGGAGTTGCTGTGTAAACTGGATTGGC  450

seq1  TGGCCAGTGAGCCTCAGAGGTTCACTTGTCTCCTCCTCTTCTACCCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGTGAGCCTCAGAGGTTCACTTGTCTCCTCCTCTTCTACCCTGAG  500

seq1  ATTATAAGCACATACCGCCATGCTAGGCTTTTTGTGGGAGGTTCTCGCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAGCACATACCGCCATGCTAGGCTTTTTGTGGGAGGTTCTCGCGG  550

seq1  TTTGAATTCACATCCTTGTGCTTGCAAGGCAAATATTTTACCAACTGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTCACATCCTTGTGCTTGCAAGGCAAATATTTTACCAACTGGGC  600

seq1  TATCTCTCTAGCCTCTAAGTCATTTAGTTTAAAAAAAAAAACAACCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCTAGCCTCTAAGTCATTTAGTTTAAAAAAAAAAACAACCAAAT  650

seq1  TTGGCATTTGACTTGTTGATATTAATAGCAAAAATATATTATAGAAGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTTGACTTGTTGATATTAATAGCAAAAATATATTATAGAAGACC  700

seq1  CTGAGGTAGCAAAATTAAGAAATTCCAGGAAAAGCATGGAGAATATTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTAGCAAAATTAAGAAATTCCAGGAAAAGCATGGAGAATATTGTA  750

seq1  TCCTGTGTAGCTAATTGACATTCAGGTGTTAAACCTAGCATCTCAATGAT  800
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCTGTGTAGCTAATTGACATTCA-GTGTTAAACCTAGCATCTCAATGAT  799

seq1  GAGCATTTGAAATTTCTGGGCACAATTTTTCCCTCATGAGCTCTCTGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTTGAAATTTCTGGGCACAATTTTTCCCTCATGAGCTCTCTGTGA  849

seq1  AAAATCTCTTGGAGCATTTGCTTTAGGGCGTGGCTCCCTCACATACAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTCTTGGAGCATTTGCTTTAGGGCGTGGCTCCCTCACATACAGCC  899

seq1  AGATGCATATATATTAGGATGGCTTTACCAAGGCAAGGCTGGTAGACTCC  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGATGCATATATATTAGGATGGCTTTACC-AGGCAAGGCTGGTAGACTCC  948

seq1  ATCAGGTTGAAACTCTTCAAGACATATGACCTGGTACAGTCAACAAATAG  1000
      |||||||||||||||||| |||||||||||||||||||||||   |||||
seq2  ATCAGGTTGAAACTCTTC-AGACATATGACCTGGTACAGTCA--CAATAG  995

seq1  GTAGCCA-TCTAAG-ATGACAGAAAGAGAAGAAACACAGTTTATAAGAGA  1048
      ||||||| |||||| ||||| | |||||||||||| ||| ||||||||||
seq2  GTAGCCATTCTAAGAATGAC-GGAAGAGAAGAAAC-CAG-TTATAAGAGA  1042

seq1  CCTTATTCATACCTGTGACTTTGTTTTGTGACACTGTTTCTGGGGGAGAT  1098
      || ||||| |||||||||| |||||||| ||||||| |||||||||||||
seq2  CC-TATTCCTACCTGTGAC-TTGTTTTG-GACACTGGTTCTGGGGGAGAT  1089

seq1  GTTAAGTGTCTACTCAC  1115
      ||||||||||| |||||
seq2  GTTAAGTGTCT-CTCAC  1105

seq1: chr8_114813875_114814364
seq2: B6Ng01-029H24.g_69_558 (reverse)

seq1  CCTCCCTTCCTTCCCACTCTCTCCTTCTTTTTCCATCCATTTGCCAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTCCTTCCCACTCTCTCCTTCTTTTTCCATCCATTTGCCAAATA  50

seq1  ATACATAACCGCACCGTATCTCGTGTTCCGCGCTACAGGAACAACCACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAACCGCACCGTATCTCGTGTTCCGCGCTACAGGAACAACCACGA  100

seq1  TCTGGTGGGGAAAGCCATACATTAAACAAATGCCTCACAAAACAGTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGGGGAAAGCCATACATTAAACAAATGCCTCACAAAACAGTAAGA  150

seq1  TGAGTGTTAAAGCTGAGTCTGAAAAGGAGGTCCTCAGCCCCCAGACGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTTAAAGCTGAGTCTGAAAAGGAGGTCCTCAGCCCCCAGACGACC  200

seq1  AGATCACTGTCAGACAGGGTCCTCAGCCCCCAGACGACCAGATCACTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACTGTCAGACAGGGTCCTCAGCCCCCAGACGACCAGATCACTGTC  250

seq1  AGACAGGGTCCTCAGCCCCCAGACGACCAGATCACTGTCAGACAGGGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTCCTCAGCCCCCAGACGACCAGATCACTGTCAGACAGGGTCC  300

seq1  TCAGCTATCAGAAGGGGGCCTCAGCCCCCAGACGACCAGATCACTGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTATCAGAAGGGGGCCTCAGCCCCCAGACGACCAGATCACTGTCAG  350

seq1  ATGAGCTTTGTCCTCTCCCACCTTGCTCCCCACAGTACAGCGCTTTTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTTTGTCCTCTCCCACCTTGCTCCCCACAGTACAGCGCTTTTGCT  400

seq1  TCTGAACTCTGCAATCAGACTCATCCCTTCACCACTGATTAGCTATGCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACTCTGCAATCAGACTCATCCCTTCACCACTGATTAGCTATGCGG  450

seq1  CCCGTGGGTAGCTCCTCAGTATGGATTGATTTTTGAATTC  490
      ||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGGGTAGCTCCTCAGTATGGATTGATTTTTGAATTC  490