BAC Information

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BAC

Clone NameB6Ng01-030B21
Chromosome8 (Build37)
Map Location 81,285,628 - 81,286,759
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622803, Ttc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7, LOC100039466
Downstream geneLsm6, EG666340, EG666346, D630040G17Rik, 1700011L22Rik, Mmaa, A630049P17, Smad1, LOC666378, LOC666388, LOC666392, Otud4, Tpd52-ps, Abce1, Anapc10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030B21.bB6Ng01-030B21.g
ACCDH860118DH860119
length1,110408
definitionDH860118|Mus musculus domesticus DNA, BAC clone: B6Ng01-030B21, 5' end.DH860119|Mus musculus domesticus DNA, BAC clone: B6Ng01-030B21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgcctgacttcttttttgtttgtttgtttgtttgtttgttttt
ttcgagacagggtttctctgtatagaaactcactttgtctatacactttg
tctatacagctgtcctggaactcactttgtagaccaggctggccttgaac
tcagagatccacctgcctctgcctcccaagtgctgggattaaaggcgtgc
tccaccacgcccggctctacccgacttcttgagtgcttagaaatttccta
caggcccactgcaagctaagattattgtggtgtctagagatgtaaaaatg
aacagacttagaattgtctctaaacatccagtctaggaagagaaatcctt
gtacagccaacattaaaagttacaagaatgaactgtgctcaggagcaatt
aacatagctgctgcagtagtatgagcatgaaaaggtcagcttaggaactt
tgggaaggtcatgaaacacttgctcctctggaagggagaggctaattacc
atttctcagaccactgggcaggaaccgacctgagggtggggacacattct
gcaggactgactattgcccaccttcagacaagggaagtccttgttacctt
attccttaaagaccaatcagtttaaagggtgaactgttctgacaatcata
ttgtgcctagttgctgatgctctattctgcccctggaaaccatataaaaa
ctcgctgaacaggcactggggattgctaactctccttcaggtctgggatg
accccagtgcactggaacaataaattcctcttgctttttgcatcaatccc
agctccacgtggttcactcagtgggtcccaggtaagctaaggctccccga
agtcttacaaacacacccacccttcactcttctgtggcactaactccagt
gcatgcagcagaggcagagccagaccagtagtgggtcaccagggcttcca
accttaaagagagtctggagaaacaagtattctttcttccatgggacatg
tgtagaagaacatctggtccttcacgagacatggagtgatctgactgatc
tttgtcctcccagtctctcgaaactcttgagaacaggtatgtttaaatac
ctctgaacaa
tgggaactcttcagaaggtataaatgccagggccctgggagaggccaggg
cactctgaaaatgcctgctgagactgctcctagttcctgttcttcctctt
tgtcaagtggtcatgagcaaaaagatgagaagaagaaactggataacctg
atgattaagactggatttgccccaaggaactttatcagcaggaaatagtc
caaagagctctatgactcctttcccctctaacctttcttctctcctacct
agtattagaagattggaagggattgggatagaatggagttgaagtgttgt
aggtataagaacccaataaagtagcccaaaaaagtctgcccagcctttcc
tcctaaagccttccactgactagatgagacccattttaggtcatgtgatg
tgagctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_81285628_81286759
seq2: B6Ng01-030B21.b_44_1153

seq1  GAATTCCTGCCTGACTTCTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCTGACTTCTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTT  50

seq1  TTCGAGACAGGGTTTCTCTGTATAGAAACTCACTTTGTCTATACACTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGACAGGGTTTCTCTGTATAGAAACTCACTTTGTCTATACACTTTG  100

seq1  TCTATACAGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACAGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAAC  150

seq1  TCAGAGATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGC  200

seq1  TCCACCACGCCCGGCTCTACCCGACTTCTTGAGTGCTTAGAAATTTCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCACGCCCGGCTCTACCCGACTTCTTGAGTGCTTAGAAATTTCCTA  250

seq1  CAGGCCCACTGCAAGCTAAGATTATTGTGGTGTCTAGAGATGTAAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCACTGCAAGCTAAGATTATTGTGGTGTCTAGAGATGTAAAAATG  300

seq1  AACAGACTTAGAATTGTCTCTAAACATCCAGTCTAGGAAGAGAAATCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTTAGAATTGTCTCTAAACATCCAGTCTAGGAAGAGAAATCCTT  350

seq1  GTACAGCCAACATTAAAAGTTACAAGAATGAACTGTGCTCAGGAGCAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGCCAACATTAAAAGTTACAAGAATGAACTGTGCTCAGGAGCAATT  400

seq1  AACATAGCTGCTGCAGTAGTATGAGCATGAAAAGGTCAGCTTAGGAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGCTGCTGCAGTAGTATGAGCATGAAAAGGTCAGCTTAGGAACTT  450

seq1  TGGGAAGGTCATGAAACACTTGCTCCTCTGGAAGGGAGAGGCTAATTACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGGTCATGAAACACTTGCTCCTCTGGAAGGGAGAGGCTAATTACC  500

seq1  ATTTCTCAGACCACTGGGCAGGAACCGACCTGAGGGTGGGGACACATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAGACCACTGGGCAGGAACCGACCTGAGGGTGGGGACACATTCT  550

seq1  GCAGGACTGACTATTGCCCACCTTCAGACAAGGGAAGTCCTTGTTACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACTGACTATTGCCCACCTTCAGACAAGGGAAGTCCTTGTTACCTT  600

seq1  ATTCCTTAAAGACCAATCAGTTTAAAGGGTGAACTGTTCTGACAATCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTAAAGACCAATCAGTTTAAAGGGTGAACTGTTCTGACAATCATA  650

seq1  TTGTGCCTAGTTGCTGATGCTCTATTCTGCCCCTGGAAACCATATAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCTAGTTGCTGATGCTCTATTCTGCCCCTGGAAACCATATAAAAA  700

seq1  CTCGCTGAACAGGCACTGGGGATTGCTAACTCTCCTTCAGGTCTGGGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTGAACAGGCACTGGGGATTGCTAACTCTCCTTCAGGTCTGGGATG  750

seq1  ACCCCAGTGCACTGGAACAATAAATTCCTCTTGCTTTTTGCATCAATCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGTGCACTGGAACAATAAATTCCTCTTGCTTTTTGCATCAATCCC  800

seq1  AGCTCCACGTGGTTCACTCAGTGGGTCCCAGGTAAGCTAAGGCTCCCCGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCACGTGGTTCACTCAGTGGGTCCCAGGTAAGCTAAGGCTCCCCGA  850

seq1  AGTCTTACAAACACACCCACCCTTCACTCTTCTGTTGGCACTAACTCCAG  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGTCTTACAAACACACCCACCCTTCACTCTTCTG-TGGCACTAACTCCAG  899

seq1  TGCAATGCAGCAAGAGGCAGAGCCAGGACCAGGTAAGTGGGTCACCAGGG  950
      ||| ||||||| ||||||||||||| ||||||   |||||||||||||||
seq2  TGC-ATGCAGC-AGAGGCAGAGCCA-GACCAG--TAGTGGGTCACCAGGG  944

seq1  CTTCACACCCTTAAAAGAGAAGTCTGAGAAAAACAAAGTATTCTTTCTTC  1000
      |||| || |||| |||||| |||||| || |||| |||||||||||||||
seq2  CTTC-CAACCTT-AAAGAG-AGTCTG-GAGAAAC-AAGTATTCTTTCTTC  989

seq1  CATGGGACAATGTGTAGAAGACACCATCTGG-CCCTCACGAGACATGGAA  1049
      |||||||| |||||||||||  | ||||||| || ||||||||||||| |
seq2  CATGGGAC-ATGTGTAGAAG--AACATCTGGTCCTTCACGAGACATGG-A  1035

seq1  GTGATCTGAACTTGATCTTGTACTTCCCAGTCTCTAG-AACTC-TGAGAA  1097
      |||||||||   |||||||   | ||||||||||| | ||||| ||||| 
seq2  GTGATCTGA--CTGATCTTTGTCCTCCCAGTCTCTCGAAACTCTTGAGA-  1082

seq1  ACACAGGTGTATTGTTTATAAATTACTCTGAACAA  1132
        |||||| | ||     |||||  ||||||||||
seq2  --ACAGGTATGTT-----TAAATACCTCTGAACAA  1110