BAC Information

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BAC

Clone NameB6Ng01-030B24
Chromosome8 (Build37)
Map Location 94,113,871 - 94,114,984
singlet/doubletsinglet
Overlap geneAJ237917
Upstream geneLOC100041133, Chd9, LOC100041156, EG626231, Rbl2, Aktip, LOC667162, LOC100041222, Rpgrip1l
Downstream geneLOC100041254, LOC674324, LOC100040628, Irx3, 4933436C20Rik, Irx5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030B24.bB6Ng01-030B24.g
ACCDH860124DH860125
length1,110184
definitionDH860124|Mus musculus domesticus DNA, BAC clone: B6Ng01-030B24, 5' end.DH860125|Mus musculus domesticus DNA, BAC clone: B6Ng01-030B24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaagcaggacagctgtaggcccagtggtgtcctagatgaccta
agctcttcaccactgcggtggcttccttcacattcccaaaggctgcagta
gccccagctctcccatcaaatgtaggagcaacaaggaaggaaggagacca
ccctcctggtgtggctccttaaaagtgaaggaattggccgggcggtggtg
gcgcacacctttgatcccagcacttgggaggcagagacagccggatttct
gagttcaaggccagcctggtctacagagtgagttccaggacagccagggc
tacacagagaaaccctgtctcaaaaaacaaacaaacaaacaaacaaacaa
caacaacaaaaaagtgaaggaattgtccctcagagttccaggtgacagac
acttcctctactgccactatggtgtctgagctttttgtcagctcatctgt
aaacactgtcgggggaaatagaagtactacaatcagcttattaaccaaga
gttctcctgaatctagtaatggagtcaatatcctttgagtgtttggagaa
tggtgatggggtacccctcacaggcatcagggagtattttcttcccttct
ttgacagactcttagaacctctttagaacccctaggtaatccttatgcat
ttaagggatcttagcaaaagcagtaggaagctctcacaagcactgggcct
tgccctgcataaaaggtcctcatggaccagcattgtgttctccattgctt
tatgtcttcctcaatctcccttggtatttggggcatacaagtctccttta
agaaatgagttgggtcctctggctttctcttttggaagaatctaaggagc
tgttgccataaagctggtcaagtctccactgaggtaataggtttacagcc
ctgaccggacagttctctctttctagtctatatcgcataggctctagccc
ctcacccattttgcacagccataagctttttatctggcgtgctcagtagc
acctcagtgaggcctggaaggcagaaatgagggcactgaagaattccaat
cagctcatctcttgctctcccatgggaaatgggctaaattacactccatg
gatattggga
tgcagcagctgactcaggcgggcagaataaataacaatactgaaacgaaa
gcaccttaagtcaccagatatgtgagaaaaatgaaaaaaaaaagtaaaca
gagcctggtgtgcttacagataccatcaagcaaactatgcatcatgggaa
ttctagaaagagacaggagggtggggggaggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_94113871_94114984
seq2: B6Ng01-030B24.b_44_1153

seq1  GAATTCAGAAGCAGGACAGCTGTAGGCCCAGTGGTGTCCTAGATGACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGCAGGACAGCTGTAGGCCCAGTGGTGTCCTAGATGACCTA  50

seq1  AGCTCTTCACCACTGCGGTGGCTTCCTTCACATTCCCAAAGGCTGCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTCACCACTGCGGTGGCTTCCTTCACATTCCCAAAGGCTGCAGTA  100

seq1  GCCCCAGCTCTCCCATCAAATGTAGGAGCAACAAGGAAGGAAGGAGACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGCTCTCCCATCAAATGTAGGAGCAACAAGGAAGGAAGGAGACCA  150

seq1  CCCTCCTGGTGTGGCTCCTTAAAAGTGAAGGAATTGGCCGGGCGGTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTGGTGTGGCTCCTTAAAAGTGAAGGAATTGGCCGGGCGGTGGTG  200

seq1  GCGCACACCTTTGATCCCAGCACTTGGGAGGCAGAGACAGCCGGATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCACACCTTTGATCCCAGCACTTGGGAGGCAGAGACAGCCGGATTTCT  250

seq1  GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGC  300

seq1  TACACAGAGAAACCCTGTCTCAAAAAACAAACAAACAAACAAACAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGAAACCCTGTCTCAAAAAACAAACAAACAAACAAACAAACAA  350

seq1  CAACAACAAAAAAGTGAAGGAATTGTCCCTCAGAGTTCCAGGTGACAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAAAAAAGTGAAGGAATTGTCCCTCAGAGTTCCAGGTGACAGAC  400

seq1  ACTTCCTCTACTGCCACTATGGTGTCTGAGCTTTTTGTCAGCTCATCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTCTACTGCCACTATGGTGTCTGAGCTTTTTGTCAGCTCATCTGT  450

seq1  AAACACTGTCGGGGGAAATAGAAGTACTACAATCAGCTTATTAACCAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGTCGGGGGAAATAGAAGTACTACAATCAGCTTATTAACCAAGA  500

seq1  GTTCTCCTGAATCTAGTAATGGAGTCAATATCCTTTGAGTGTTTGGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCTGAATCTAGTAATGGAGTCAATATCCTTTGAGTGTTTGGAGAA  550

seq1  TGGTGATGGGGTACCCCTCACAGGCATCA-GGAGTATTTTCTTCCCTTCT  599
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGGTGATGGGGTACCCCTCACAGGCATCAGGGAGTATTTTCTTCCCTTCT  600

seq1  TTGACAGACTCTTAGAACCTCTTTAGAACCCCTAGGTAATCCTTATGCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGACTCTTAGAACCTCTTTAGAACCCCTAGGTAATCCTTATGCAT  650

seq1  TTAAGGGATCTTAGCAAAAGCAGTAGGAAGCTCTCACAAGCACTGGGCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGATCTTAGCAAAAGCAGTAGGAAGCTCTCACAAGCACTGGGCCT  700

seq1  TGCCCTGCATAAAAGGTCCTCATGGACCAGCATTGTGTTCTCCATTGCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGCATAAAAGGTCCTCATGGACCAGCATTGTGTTCTCCATTGCTT  750

seq1  TATGTCTTCCTCAAATCTCCCTTGGTATTT-GGGCATACAAGTCTCCTTT  798
      |||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  TATGTCTTCCTC-AATCTCCCTTGGTATTTGGGGCATACAAGTCTCCTTT  799

seq1  AAGAAATGAGTTGGAT-CTCTGGCTTTCTC-TTTGGAGGAATCTAA-GAG  845
      |||||||||||||| | ||||||||||||| |||||| |||||||| |||
seq2  AAGAAATGAGTTGGGTCCTCTGGCTTTCTCTTTTGGAAGAATCTAAGGAG  849

seq1  CTGGTGCCATAAAGCT-GTCCAGTCTCCACTGAGGTAATA-GTTTACAG-  892
      ||| |||||||||||| ||| ||||||||||||||||||| |||||||| 
seq2  CTGTTGCCATAAAGCTGGTCAAGTCTCCACTGAGGTAATAGGTTTACAGC  899

seq1  CCTGA-CGGACAGGTCTCTCTTTCTAGTCTATATCGCATAGGCTCTAGGC  941
      ||||| ||||||| ||||||||||||||||||||||||||||||||| ||
seq2  CCTGACCGGACAGTTCTCTCTTTCTAGTCTATATCGCATAGGCTCTA-GC  948

seq1  CCCTCACCCCATTTGCACAGCCAT-AGCTTTTATCCTGGCGTTGCTCAGT  990
      |||||||||  ||||||||||||| |||||||   |||||| ||||||||
seq2  CCCTCACCCATTTTGCACAGCCATAAGCTTTTTATCTGGCG-TGCTCAGT  997

seq1  AGCACCTCCAGTGAAGGGCCAGGAAGGCAGGAAAAGAGGGCACTGAAAGA  1040
      ||||||| ||||||  |||| |||||||| |||| |||||||||| ||||
seq2  AGCACCT-CAGTGA--GGCCTGGAAGGCA-GAAATGAGGGCACTG-AAGA  1042

seq1  ATTCAGATCAGCTCATTCTTTGCTTCATCCCATTGGAGAAAGGGCTAAAA  1090
      ||||  ||||||||||   |||||   |||||| ||| || |||||||| 
seq2  ATTCCAATCAGCTCATCTCTTGCT--CTCCCATGGGA-AATGGGCTAAA-  1088

seq1  TTAACATCTCAAAGGATATTGGGA  1114
       | ||| ||| | |||||||||||
seq2  -TTACA-CTCCATGGATATTGGGA  1110