BAC Information

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BAC

Clone NameB6Ng01-030C16
Chromosome8 (Build37)
Map Location 69,188,939 - 69,189,989
singlet/doubletsinglet
Overlap genenone
Upstream geneMarch1, LOC100040986, 1810029B16Rik, Tktl2
Downstream geneNpy5r, Npy1r, BC053440, LOC665453, Nat1, Nat2, LOC100041265, Nat3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030C16.bB6Ng01-030C16.g
ACCDH860152DH860153
length1,0441,214
definitionDH860152|Mus musculus domesticus DNA, BAC clone: B6Ng01-030C16, 5' end.DH860153|Mus musculus domesticus DNA, BAC clone: B6Ng01-030C16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctacattggaatatatttattattttcttaggttgattttgtt
attttattttattttaaaattattatttattcacttatgtgttttttatt
ttaaaatcctcaattttctttctttggagtatgttgtttatgcatgcttt
gttttattgcaagtcctgggaagctaaaatattagtgttgtaagtatgac
aacaataggtaggtgttgacactgctggtactatttgaactttcaatggt
aactgagtaaagcggccagctgatagtcacctttcataacagactaattg
ataggcacactgaaaaacttgtgccagttttctaaaggaaatagttggag
tccagaaccatttccttcaaataatgatctgtggaaactgaaataatttt
atcttctgagactgtagatgccagtgcgttcagattgtcatttcaggctc
cttattatgacttcataccttgcaagtatttgctccaaaaatgtttgtgt
agctagaagcactaactcggggaggggggtgtcttttgatttcatcttta
gtagaataaaagctatctccaagggactactccctggactgttttgacaa
tttattccaaagatcagcagtgccttgtcctttactattctctgtgattg
tttctttttgtattaaaaaaccctgtttgttaacatttctctgtgttctt
tttgcttattttttttttaactttgtttttatgtacactgctgtggtggt
ttgagtaagaatgatcatcataggtatatatacatatatttcgaatctta
gtcagcagggagtggcactgtttggaagatttaggaggtgtggccttgtc
agaggaaggggtgtcactgaagttaggcttcaaggtttcaaaagtccatg
ctaatcccagatctgcttgaattcccgaccaactacttctccgcatcatg
gctccatgcctgctttcatggtcccaacaatataatatggacaagccctg
gaaaatgtagcaagttcccagtaatatgtttctcttaaagagtt
gaattccttaacctgataaacagcttcagcaaagtggctggatataaaat
taattcaaacaaatcagcagctgtcttctactcaaaggataaacggactg
agaaagaatttaggaaacaacactctacacaatagtcacaaataatataa
aatattttggtgtgaatctaactaaggaagcaaaagatctttataataaa
aacttcaagtctctgaaaaaagaaattgaagatctcagaagatgcaaaga
tctcccatgcttatgggttggcaggattaatatagcaaaaatgacaatct
tgccaaaaagctctatacctattcaatgcaatccccatcaaaatttcaac
caattcttcatagagttagaaagagcaatttgcaaattcatttggaataa
caaagacccaggatagcaaaaactattctcaacaataaaagaacttccag
ggaaatcaccatcccagacctcaagctgtactacagatcattaagtgata
aaagaacctctggtggaatcaccatgccggacctaaaactgtactacaca
gcaattgtgatcaaaactgcatggtactggtatagtgacagacaagtaga
ccaatggaacagaattgaagacccagagatgaacccacacacctatggtc
acttgatctttgacaagggagctaaaaccatccagtggaaaaaagacagc
attttcaacaaatggtgctggcacaactggctgttatcatgtagaagaat
gtgaattgatccattactatctccttgtactaaggtcaaatctaagtgga
ttaaggaactccacataaaaccagagacactgaaattatagaggagaaag
tagggaaagccctagaagacatggatacaggggaaaaattcctgaataga
acagcaatggctgtgctgtaagatgagatcgataaatgagactcataaaa
ttgcaagctctgcaagcaaaagacacgtcataagacaaaagacacaacga
tgggaaaggatctttactatcccaatcggataggggactaatcaattaat
taaagaactcagagtgacctcgaaatcaatacccataaaatgtgccaagc
tgacaaagaatccaccgagaatcgaaggtgaagcggaagtcaattctata
ctcggaagcacaaaccggatcctcctccgcaagctagactaaactcgaca
gaaacgtgcctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69188939_69189989
seq2: B6Ng01-030C16.b_41_1084 (reverse)

seq1  AACTCTTATAAGAGAAAGCAATTAACTGGGAACTTGCTTACATTTTCCAA  50
      ||||||| ||||||||| ||  | ||||||||||||| |||||||||| |
seq2  AACTCTT-TAAGAGAAA-CATATTACTGGGAACTTGC-TACATTTTCC-A  46

seq1  GGCCTAGTCCATTATCATCATGGTGGGGACCATGAAAGCAGGCATGGCAG  100
      || || ||||| ||| || || || |||||||||||||||||||||| ||
seq2  GGGCTTGTCCA-TATTAT-ATTGTTGGGACCATGAAAGCAGGCATGG-AG  93

seq1  CCATGATGCTGGAGAAGTAGTTGGTCCGGAAATACAAGCAGATCTGGGCT  150
      ||||||||| ||||||||||||||| ||| ||| |||||||||||||| |
seq2  CCATGATGC-GGAGAAGTAGTTGGT-CGGGAATTCAAGCAGATCTGGGAT  141

seq1  TAGCATGGACTTTTGAAACCTTGAAGCCTAACCTCAGTGACA-CCCTTCC  199
      |||||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  TAGCATGGACTTTTGAAACCTTGAAGCCTAACTTCAGTGACACCCCTTCC  191

seq1  TCTGACAAGGCCACACCTCCTAACTCTTCCAAACAGTGCCACTCCCTGCT  249
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCTGACAAGGCCACACCTCCTAAATCTTCCAAACAGTGCCACTCCCTGCT  241

seq1  GACTAAGATTCGAAATATATGTATATATACCTATGATGATCATTCTTACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGATTCGAAATATATGTATATATACCTATGATGATCATTCTTACT  291

seq1  CAAACCACCACAGCAGTGTACATAAAAACAAAGTT-AAAAAAAAATAAGC  348
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAAACCACCACAGCAGTGTACATAAAAACAAAGTTAAAAAAAAAATAAGC  341

seq1  AAAAAGAACACAGAGAAATGTTAACAAACAGGGTTTTTTAATACAAAAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAACACAGAGAAATGTTAACAAACAGGGTTTTTTAATACAAAAAG  391

seq1  AAACAATCACAGAGAATAGTAAAGGACAAGGCACTGCTGATCTTTGGAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATCACAGAGAATAGTAAAGGACAAGGCACTGCTGATCTTTGGAAT  441

seq1  AAATTGTCAAAACAGTCCAGGGAGTAGTCCCTTGGAGATAGCTTTTATTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTCAAAACAGTCCAGGGAGTAGTCCCTTGGAGATAGCTTTTATTC  491

seq1  TACTAAAGATGAAATCAAAAGACACCCCCCTCCCCGAGTTAGTGCTTCTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAGATGAAATCAAAAGACACCCCCCTCCCCGAGTTAGTGCTTCTA  541

seq1  GCTACACAAACATTTTTGGAGCAAATACTTGCAAGGTATGAAGTCATAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACAAACATTTTTGGAGCAAATACTTGCAAGGTATGAAGTCATAAT  591

seq1  AAGGAGCCTGAAATGACAATCTGAACGCACTGGCATCTACAGTCTCAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCCTGAAATGACAATCTGAACGCACTGGCATCTACAGTCTCAGAA  641

seq1  GATAAAATTATTTCAGTTTCCACAGATCATTATTTGAAGGAAATGGTTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATTATTTCAGTTTCCACAGATCATTATTTGAAGGAAATGGTTCT  691

seq1  GGACTCCAACTATTTCCTTTAGAAAACTGGCACAAGTTTTTCAGTGTGCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCAACTATTTCCTTTAGAAAACTGGCACAAGTTTTTCAGTGTGCC  741

seq1  TATCAATTAGTCTGTTATGAAAGGTGACTATCAGCTGGCCGCTTTACTCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTAGTCTGTTATGAAAGGTGACTATCAGCTGGCCGCTTTACTCA  791

seq1  GTTACCATTGAAAGTTCAAATAGTACCAGCAGTGTCAACACCTACCTATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCATTGAAAGTTCAAATAGTACCAGCAGTGTCAACACCTACCTATT  841

seq1  GTTGTCATACTTACAACACTAATATTTTAGCTTCCCAGGACTTGCAATAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCATACTTACAACACTAATATTTTAGCTTCCCAGGACTTGCAATAA  891

seq1  AACAAAGCATGCATAAACAACATACTCCAAAGAAAGAAAATTGAGGATTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGCATGCATAAACAACATACTCCAAAGAAAGAAAATTGAGGATTT  941

seq1  TAAAATAAAAAACACATAAGTGAATAAATAATAATTTTAAAATAAAATAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAAAACACATAAGTGAATAAATAATAATTTTAAAATAAAATAA  991

seq1  AATAACAAAATCAACCTAAGAAAATAATAAATATATTCCAATGTAGAGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAAAATCAACCTAAGAAAATAATAAATATATTCCAATGTAGAGAA  1041

seq1  TTC  1051
      |||
seq2  TTC  1044