BAC Information

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BAC

Clone NameB6Ng01-031D22
Chromosome8 (Build37)
Map Location 75,603,642 - 75,753,722
singlet/doubletdoublet
Overlap geneLarge
Upstream geneOlfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3
Downstream geneLOC100039001, LOC666134, Crry-ps, LOC666146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031D22.bB6Ng01-031D22.g
ACCDH860917DH860918
length1,0921,087
definitionDH860917|Mus musculus domesticus DNA, BAC clone: B6Ng01-031D22, 5' end.DH860918|Mus musculus domesticus DNA, BAC clone: B6Ng01-031D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,752,609 - 75,753,722)(75,603,642 - 75,604,749)
sequence
gaattcttcaaaagagagttgccctttggcctcagagacagtaatggaca
tcactttcctagctgtacgtgggagttattgggagagattcatattgtga
ctgctttattgtccaattaatacatttggatctgagtctttgtgttctcc
tacatcataaaaggagtgtatcaggaaaaatacagattagtgatctgcta
acatgggccttgttaggacatggaagtctacctctgctcccttgacttcc
tagatattgagcctcccttaagatcatctcattacttaatgaacgtgact
tatataatttaaaagcattttttcctacttactagattaaaaaataaaaa
taataatgcagttgtaagacttggtttccaggcactgtattggtgcctgt
gacttacaactgggcatactttaaacagtttggaaagtctcttcagtgtt
tgacttctttctttacctacactggttatgaggacgtctacggcatgtct
gtaaatatttcctctttgtttgcttggaagtagtgtacaaattagattag
catttcttttcttttgacaactggcattctcctttttaagtggctttgac
aagcatcagggccagattatgaaatcaccaggtgacccttatgttcatca
actgaaatgaagttggaaaattgagctcttatctggcagacaaactcatt
ttgtttgacaaagggcctaaaggtatttgtggacctgaacagactgtcac
gctcctaatccaggtggccctgcgattagtgaacacactgttgttgatgt
ccctttctttttgtctgattgattaggtagaagcttaagaacctcttttc
tcggtatcttgggtgctcagtgtctagctgtcagcatgtcatccaagcat
gctttagatgctggagaatcactgttgtagagattcaaagttctggcttc
atagggagcaggcttaatcatcagatagagatgacaatcacaggataaag
agctcttgttgacaggtggaatgattcgagattttcgattggggatattg
caataacagtgaagtctcatgtgggggtctaaggagagaggt
gaattccagtcattatttcaacattgttgtatatatattgccatcctcta
tgggccactacattgctcatgtttcaattaccaaatggaaagcaagttcc
attcataaccatctttgattctgaataatgagcagaaaaggttattaaca
tatcttcagtgatggttctgggcaaactctggaaattttagtgttccatg
tccattccttagttacacaattgacaacattttcatgtatattttgtcct
gaattaactaaatgttaagaaggtatttttaccattcccatacttttcaa
gtactcttaaatttatcattaaaaaaataagattctgataggatattttc
ctaaaatggggtcaggtcagaggtcctagcattattggtggcacagaata
taatgagggttttgtgtgttgtgggtcaccattagctatgtaaatatgtc
atggacatttgaaagaccattattcctctgtatgtgaatatggagactga
tagctgttgaccttggttctattttctaaaactatctttacctttgcttc
tttgctataactgtgttggtagtggaagttatcccctatcaaatacgctt
ctttgagtacatgctttattcagaagcttttaaaggggttagaaggttta
tctaggatatttcacatgcatatctaatgatgtagcatcagattttttca
gtcatcatttgacttcctattttctttaggaagactttgttttatttgta
acaataatacctaatatcttttgttaaatgtcttcatttcattacttgtt
gcatcgggctttccaaaagttcaccttttattcacacaggaagtggaggg
taaaatacaccatctgagttactcattcaattatctaagattttgtagct
tttaatccaattcacatttcccatatgttaatgtctgtgctccagatggt
tatttggcatatttaaccattttctgactttagactccagtctggaagtt
gattagcacttactcgagacgcaattacccctttcaatacatacgtgcct
gttctttaaaacaaggctcttcattcttcacaacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_75752609_75753722
seq2: B6Ng01-031D22.b_44_1135 (reverse)

seq1  ACCTC-CTCCTTAGACTCCCCCACAATGGAGACTTCACTGTTTATATGCA  49
      ||||| |||||||||  ||||||||   |||||||||||| |||| ||| 
seq2  ACCTCTCTCCTTAGA--CCCCCACA--TGAGACTTCACTG-TTAT-TGC-  43

seq1  AATATCCCCAAATCTGAAAATCTCTGAAATCTGGTTCCAACCCTGTCAAA  99
      ||||||||| |||| ||||||||| |||   |  |||||  |||||| ||
seq2  AATATCCCC-AATC-GAAAATCTC-GAA---TCATTCCA--CCTGTC-AA  84

seq1  CAAGAGCTCTTTATCCTGTGATTGGTCAATCTCTATCTGATGATTAAGCC  149
      ||||||||||||||||||||||| ||| ||||||||||||||||||||||
seq2  CAAGAGCTCTTTATCCTGTGATT-GTC-ATCTCTATCTGATGATTAAGCC  132

seq1  TGCTCCCCTATGAAGCCAGAACTTTGAATTCTCTACAACAGTGATTTCTC  199
      |||| ||||||||||||||||||||||| ||||||||||||||| |||||
seq2  TGCT-CCCTATGAAGCCAGAACTTTGAA-TCTCTACAACAGTGA-TTCTC  179

seq1  CAGCATCTAAAGCATGCCTTGGATGACATGCTGACAGCCTAGACACTGGG  249
      |||||||||||||||| |||||||||||||||||||| |||||||||| |
seq2  CAGCATCTAAAGCATG-CTTGGATGACATGCTGACAG-CTAGACACTGAG  227

seq1  CACCCAAGATACCGAGAAAAGAGGTTCTTAAGCTTCTACCTAATCAATCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAAGATACCGAGAAAAGAGGTTCTTAAGCTTCTACCTAATCAATCA  277

seq1  GACAAAAAGAAAGGGACATCAACAACAGTGTGTTCACTAATCGCAGGGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAAGAAAGGGACATCAACAACAGTGTGTTCACTAATCGCAGGGCC  327

seq1  ACCTGGATTAGGAGCCTGACAGTCTGTTCAGGTCCACAAATACCTTTAGG  399
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACCTGGATTAGGAGCGTGACAGTCTGTTCAGGTCCACAAATACCTTTAGG  377

seq1  CCCTTTGTCAAACAAAATGAGTTTGTCTGCCAGATAAGAGCTCAATTTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGTCAAACAAAATGAGTTTGTCTGCCAGATAAGAGCTCAATTTTC  427

seq1  CAACTTCATTTCAGTTGATGAACATAAGGGTCACCTGGTGATTTCATAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCATTTCAGTTGATGAACATAAGGGTCACCTGGTGATTTCATAAT  477

seq1  CTGGCCCTGATGCTTGTCAAAGCCACTTAAAAAGGAGAATGCCAGTTGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCTGATGCTTGTCAAAGCCACTTAAAAAGGAGAATGCCAGTTGTC  527

seq1  AAAAGAAAAGAAATGCTAATCTAATTTGTACACTACTTCCAAGCAAACAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGAAATGCTAATCTAATTTGTACACTACTTCCAAGCAAACAA  577

seq1  AGAGGAAATATTTACAGACATGCCGTAGACGTCCTCATAACCAGTGTAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAATATTTACAGACATGCCGTAGACGTCCTCATAACCAGTGTAGG  627

seq1  TAAAGAAAGAAGTCAAACACTGAAGAGACTTTCCAAACTGTTTAAAGTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAGAAGTCAAACACTGAAGAGACTTTCCAAACTGTTTAAAGTAT  677

seq1  GCCCAGTTGTAAGTCACAGGCACCAATACAGTGCCTGGAAACCAAGTCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTTGTAAGTCACAGGCACCAATACAGTGCCTGGAAACCAAGTCTT  727

seq1  ACAACTGCATTATTATTTTTATTTTTTAATCTAGTAAGTAGGAAAAAATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGCATTATTATTTTTATTTTTTAATCTAGTAAGTAGGAAAAAATG  777

seq1  CTTTTAAATTATATAAGTCACGTTCATTAAGTAATGAGATGATCTTAAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAATTATATAAGTCACGTTCATTAAGTAATGAGATGATCTTAAGG  827

seq1  GAGGCTCAATATCTAGGAAGTCAAGGGAGCAGAGGTAGACTTCCATGTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCAATATCTAGGAAGTCAAGGGAGCAGAGGTAGACTTCCATGTCC  877

seq1  TAACAAGGCCCATGTTAGCAGATCACTAATCTGTATTTTTCCTGATACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGGCCCATGTTAGCAGATCACTAATCTGTATTTTTCCTGATACAC  927

seq1  TCCTTTTATGATGTAGGAGAACACAAAGACTCAGATCCAAATGTATTAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTATGATGTAGGAGAACACAAAGACTCAGATCCAAATGTATTAAT  977

seq1  TGGACAATAAAGCAGTCACAATATGAATCTCTCCCAATAACTCCCACGTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAATAAAGCAGTCACAATATGAATCTCTCCCAATAACTCCCACGTA  1027

seq1  CAGCTAGGAAAGTGATGTCCATTACTGTCTCTGAGGCCAAAGGGCAACTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGGAAAGTGATGTCCATTACTGTCTCTGAGGCCAAAGGGCAACTC  1077

seq1  TCTTTTGAAGAATTC  1114
      |||||||||||||||
seq2  TCTTTTGAAGAATTC  1092

seq1: chr8_75603642_75604749
seq2: B6Ng01-031D22.g_68_1154

seq1  GAATTCCAGTCATTATTTCAACATTGTTGTATATATATTGCCATCCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCATTATTTCAACATTGTTGTATATATATTGCCATCCTCTA  50

seq1  TGGGCCACTACATTGCTCATGTTTCAATTACCAAATGGAAAGCAAGTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCACTACATTGCTCATGTTTCAATTACCAAATGGAAAGCAAGTTCC  100

seq1  ATTCATAACCATCTTTGATTCTGAATAATGAGCAGAAAAGGTTATTAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAACCATCTTTGATTCTGAATAATGAGCAGAAAAGGTTATTAACA  150

seq1  TATCTTCAGTGATGGTTCTGGGCAAACTCTGGAAATTTTAGTGTTCCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCAGTGATGGTTCTGGGCAAACTCTGGAAATTTTAGTGTTCCATG  200

seq1  TCCATTCCTTAGTTACACAATTGACAACATTTTCATGTATATTTTGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCCTTAGTTACACAATTGACAACATTTTCATGTATATTTTGTCCT  250

seq1  GAATTAACTAAATGTTAAGAAGGTATTTTTACCATTCCCATACTTTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAACTAAATGTTAAGAAGGTATTTTTACCATTCCCATACTTTTCAA  300

seq1  GTACTCTTAAATTTATCATTAAAAAAATAAGATTCTGATAGGATATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTTAAATTTATCATTAAAAAAATAAGATTCTGATAGGATATTTTC  350

seq1  CTAAAATGGGGTCAGGTCAGAGGTCCTAGCATTATTGGTGGCACAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATGGGGTCAGGTCAGAGGTCCTAGCATTATTGGTGGCACAGAATA  400

seq1  TAATGAGGGTTTTGTGTGTTGTGGGTCACCATTAGCTATGTAAATATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGGGTTTTGTGTGTTGTGGGTCACCATTAGCTATGTAAATATGTC  450

seq1  ATGGACATTTGAAAGACCATTATTCCTCTGTATGTGAATATGGAGACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACATTTGAAAGACCATTATTCCTCTGTATGTGAATATGGAGACTGA  500

seq1  TAGCTGTTGACCTTGGTTCTATTTTCTAAAACTATCTTTACCTTTGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTTGACCTTGGTTCTATTTTCTAAAACTATCTTTACCTTTGCTTC  550

seq1  TTTGCTATAACTGTGTTGGTAGTGGAAGTTATCCCCTATCAAATACGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTATAACTGTGTTGGTAGTGGAAGTTATCCCCTATCAAATACGCTT  600

seq1  CTTTGAGTACATGCTTTATTCAGAAGCTTTTAAAGGGGTTAGAAGGTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGTACATGCTTTATTCAGAAGCTTTTAAAGGGGTTAGAAGGTTTA  650

seq1  TCTAGGATATTTCACATGCATATCTAATGATGTAGCATCAGA-TTTTTCA  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCTAGGATATTTCACATGCATATCTAATGATGTAGCATCAGATTTTTTCA  700

seq1  GTCATCATTTGACTTCCTATTTTCTTTAGGAAGACTTTGTTTTATTTGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCATTTGACTTCCTATTTTCTTTAGGAAGACTTTGTTTTATTTGTA  750

seq1  ACAATAATACCTAATATCTTTTGTTTAATTGTCTTCATTTCATTACTTGT  799
      ||||||||||||||||||||||| |||| |||||||||||||||||||||
seq2  ACAATAATACCTAATATCTTTTG-TTAAATGTCTTCATTTCATTACTTGT  799

seq1  TGCATCGGGGCTTTCCAAAAAGTTCACC-TTTATTCACACAGGAAAGTGG  848
      |||||| ||||||||| ||||||||||| |||||||||||||| ||||||
seq2  TGCATC-GGGCTTTCC-AAAAGTTCACCTTTTATTCACACAGG-AAGTGG  846

seq1  AGGGTTAAAATACACCATCTGAGTTACTCACTCAAATTATCTAAGATTTT  898
      |||| ||||||||||||||||||||||||| || ||||||||||||||||
seq2  AGGG-TAAAATACACCATCTGAGTTACTCATTC-AATTATCTAAGATTTT  894

seq1  GTAGCTTTTAAATCCAATTCACATTTCCCATAATGTTTAATGTCTGTGCT  948
      ||||||||| ||||||||||||||||||||| ||| ||||||||||||||
seq2  GTAGCTTTT-AATCCAATTCACATTTCCCAT-ATG-TTAATGTCTGTGCT  941

seq1  -CAGATGGTTATTTGGCCATATTTTAAAACCAATTTTCTGACATTTAGAC  997
       ||||||||||||||| |||||||   |||| |||||||||| |||||||
seq2  CCAGATGGTTATTTGG-CATATTT---AACC-ATTTTCTGAC-TTTAGAC  985

seq1  T-CAGTCTTGAAGTTGATTTAAGGCACCTATCTCCAGATCGCATATACCC  1046
      | |||||| ||||||||||    |||| || ||| ||| ||||  |||||
seq2  TCCAGTCTGGAAGTTGATT---AGCACTTA-CTCGAGA-CGCAATTACCC  1030

seq1  TTTCTCAATACATAC-TGTCTGTTCTTTAAAAACGAGGCTCTTCATTCCT  1095
       || ||||||||||| || ||||||||| ||||| |||||||||||||  
seq2  CTT-TCAATACATACGTGCCTGTTCTTT-AAAACAAGGCTCTTCATTC--  1076

seq1  TTTCAACAACTTT  1108
       ||| ||||||||
seq2  -TTC-ACAACTTT  1087