BAC Information

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BAC

Clone NameB6Ng01-032E08
Chromosome8 (Build37)
Map Location 120,689,454 - 120,812,732
singlet/doubletdoublet
Overlap geneCdh13
Upstream geneGan, 4933407C03Rik, Plcg2, 4632417N05Rik, Hsd17b2, Mphosph6
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032E08.bB6Ng01-032E08.g
ACCDH861657DH861658
length727946
definitionDH861657|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E08, 5' end.DH861658|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,689,454 - 120,690,179)(120,811,789 - 120,812,732)
sequence
gaattcaatatttgggatttcagcatttatacaactcatagccaagacca
gataatcctctgttgtggcagttgccatgttcttatagatgatgtaacag
tacacctaacctatgatcactagattccaggagtacctaacctatcagat
atcaaaagtatctagatatattgacaaatgtccccaatggggaccaggag
gatgttctgattgttcctggcatcctctccagtctcactgacttcttagt
tgtgggacactttgtttctacactctctttctctgaagcaccccacagag
atgtttgataaacatgtgaggccaagtgaatatatgagtatgtgatggat
ggtcagtctgtctttacagcattaacccttgcccaagaaactgacaagca
tcaagggagaccttggatcctggccatgcactgtggccagctagcaatag
cttcaaatttcacctctgctaagtgaaaaaacaaaaacaaaaacaaaatc
aaaacctgtttgggggtatttagctatgtaaacctgactgataattgagt
ggctggatttcttcagttccaacagattggtttgccattctgtagccaca
ataacagagcaaagtaacaatcatggctatgtttaattttctgaagagcg
ctgcatctctgaggctagcaatctggccaattaaatgtggccgattggca
ctcccacacatgttttggggggggggg
gaattcctacagtgggtgctgtgcttcggggaggggctggggagttttct
gaccaaatgcaaagtaggttctgtcctgaaggggcagtagtggctcagct
cctgccaaccagcaccacttagaaagagagcttaaataaatagcaagggc
cgccgagttttcaagaaatgcagggaacctgaagcatctttcaaagatat
tgatgtcatgaatttaaaaaaaaaaatgggcaccagttgtcctctccccc
ccacccccacccattggttcaagcagaccaggggctgccagtctgcaagc
cctgtccagaagccagagcagaagcgttgggacacatcccagcaagcaga
tggcaggagctccagtctgctaatcacccaatccacctccccctctgggc
tctgcctaggtggggagatgtctcagatgccagtcttaacccaagagaga
aggaggactctcacttttaacccgaggatacagccaccatcccacatctg
tggtggcagaggagacgagccctggagaattgtgttggcagcatccctca
ggaggccagattctccaaggcgtctggacaccttgctgacagctaaatgg
aaggagggcccaagcctctggctacttgacttgattctaccagactggtt
attgtgattggatgacagacgaatattttccctctccttttcaggaggtg
ctggggcacaagctgagactgggggatttcactcttctggatggtgtgtc
ttggggggaaaatatatcttctttcccatacggaatggtttctgcttctg
ctgcctgaagaactaagccagtccaatcaaaatcaaaaggtcatgacatt
gtctcaacttcattatagttcagactgcgttgtctgcaagccctttgaaa
atccctccctgccttctcctttttagggaaggaaggatggaggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_120689454_120690179
seq2: B6Ng01-032E08.b_41_767

seq1  GAATTCAATATTTGGGATTTCAGCATTTATACAACTCATAGCCAAGACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATTTGGGATTTCAGCATTTATACAACTCATAGCCAAGACCA  50

seq1  GATAATCCTCTGTTGTGGCAGTTGCCATGTTCTTATAGATGATGTAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATCCTCTGTTGTGGCAGTTGCCATGTTCTTATAGATGATGTAACAG  100

seq1  TACACCTAACCTATGATCACTAGATTCCAGGAGTACCTAACCTATCAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTAACCTATGATCACTAGATTCCAGGAGTACCTAACCTATCAGAT  150

seq1  ATCAAAAGTATCTAGATATATTGACAAATGTCCCCAATGGGGACCAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAGTATCTAGATATATTGACAAATGTCCCCAATGGGGACCAGGAG  200

seq1  GATGTTCTGATTGTTCCTGGCATCCTCTCCAGTCTCACTGACTTCTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCTGATTGTTCCTGGCATCCTCTCCAGTCTCACTGACTTCTTAGT  250

seq1  TGTGGGACACTTTGTTTCTACACTCTCTTTCTCTGAAGCACCCCACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGACACTTTGTTTCTACACTCTCTTTCTCTGAAGCACCCCACAGAG  300

seq1  ATGTTTGATAAACATGTGAGGCCAAGTGAATATATGAGTATGTGATGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGATAAACATGTGAGGCCAAGTGAATATATGAGTATGTGATGGAT  350

seq1  GGTCAGTCTGTCTTTACAGCATTAACCCTTGCCCAAGAAACTGACAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTCTGTCTTTACAGCATTAACCCTTGCCCAAGAAACTGACAAGCA  400

seq1  TCAAGGGAGACCTTGGATCCTGGCCATGCACTGTGGCCAGCTAGCAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGAGACCTTGGATCCTGGCCATGCACTGTGGCCAGCTAGCAATAG  450

seq1  CTTCAAATTTCACCTCTGCTAAGTGAAAAAACAAAAACAAAAACAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATTTCACCTCTGCTAAGTGAAAAAACAAAAACAAAAACAAAATC  500

seq1  AAAACCTGTTTGGGGGTATTTAGCTATGTAAACCTGACTGATAATTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTGTTTGGGGGTATTTAGCTATGTAAACCTGACTGATAATTGAGT  550

seq1  GGCTGGATTTCTTCAGTTCCAACAGATTGGTTTGCCATTCTGTAGCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGATTTCTTCAGTTCCAACAGATTGGTTTGCCATTCTGTAGCCACA  600

seq1  ATAACAGAGCAAAGTAACAATCATGGCTATGTTTAATTTTCTGAAGAGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGAGCAAAGTAACAATCATGGCTATGTTTAATTTTCTGAAGAGCG  650

seq1  CTGCATCTCTGAGGCTAGCAATCTGGCCAATTAAATGTGGCCGATTGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCTCTGAGGCTAGCAATCTGGCCAATTAAATGTGGCCGATTGGCA  700

seq1  CTCCCACACATGTTTGGGGGGGGGGG-  726
      ||||||||||||||| |||||||||| 
seq2  CTCCCACACATGTTTTGGGGGGGGGGG  727

seq1: chr8_120811789_120812732
seq2: B6Ng01-032E08.g_67_1012 (reverse)

seq1  ACTCCTCCATCCTTCCTTCCCTAGAAAGGCGAAGGCA-GGAGTGATTTTC  49
      | ||||||||||||||||||||| ||||| ||||||| |||| |||||||
seq2  AATCCTCCATCCTTCCTTCCCTAAAAAGGAGAAGGCAGGGAGGGATTTTC  50

seq1  AAAGGGCTTTGCAGACAACGCAGTCTGGACTATAATGAAGTTTGGAC-AT  98
      ||||||| ||||||||||||||||||| ||||||||||||||  ||| ||
seq2  AAAGGGC-TTGCAGACAACGCAGTCTGAACTATAATGAAGTTGAGACAAT  99

seq1  GTCCTGGCCTTTTGATTTTGGTTGGATCTGGCTTTGTTCTTCAGGCAGCA  148
      ||| || ||||||||||||| ||||| ||||||| |||||||||||||||
seq2  GTCATGACCTTTTGATTTTGATTGGA-CTGGCTTAGTTCTTCAGGCAGCA  148

seq1  GAAGCAGAAACCATTCCGTCTGGGAAAGAAGATAATTTTTCCCCCCAAGA  198
      ||||||||||||||||||| ||||||||||||||  ||||||||||||||
seq2  GAAGCAGAAACCATTCCGTATGGGAAAGAAGATATATTTTCCCCCCAAGA  198

seq1  CACACCATCCAGAAGAGTG-AATCCCCCAGTCTCAGCTTGTGCCCCAGCA  247
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CACACCATCCAGAAGAGTGAAATCCCCCAGTCTCAGCTTGTGCCCCAGCA  248

seq1  CCTCCTGAAAAGGAGAGGG-AAATATTCGTCTGTCATCCAATCACAATGA  296
      ||||||||||||||||||| |||||||||||||||||||||||||||| |
seq2  CCTCCTGAAAAGGAGAGGGAAAATATTCGTCTGTCATCCAATCACAATAA  298

seq1  CCAGTCTGGTAGAATCAAGTCAAGTAGCCAGAGGCTTGGGCCCTCCTTCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTGGTAGAATCAAGTCAAGTAGCCAGAGGCTTGGGCCCTCCTTCC  348

seq1  ATTTAGCTGTCAGCAAGGTGTCCAGACGCCTTGGAGAATCTGGCCTCCTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCTGTCAGCAAGGTGTCCAGACGCCTTGGAGAATCTGGCCTCCTG  398

seq1  AGGGATGCTGCCAACACAATTCTCCAGGGCTCGTCTCCTCTGCCACCACA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGCTGCCAACACAATTCTCCAGGGCTCGTCTCCTCTGCCACCACA  448

seq1  GATGTGGGATGGTGGCTGTATCCTCGGGTTAAAAGTGAGAGTCCTCCTTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGGATGGTGGCTGTATCCTCGGGTTAAAAGTGAGAGTCCTCCTTC  498

seq1  TCTCTTGGGTTAAGACTGGCATCTGAGACATCTCCCCACCTAGGCAGAGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGGTTAAGACTGGCATCTGAGACATCTCCCCACCTAGGCAGAGC  548

seq1  CCAGAGGGGGAGGTGGATTGGGTGATTAGCAGACTGGAGCTCCTGCCATC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGGGGAGGTGGATTGGGTGATTAGCAGACTGGAGCTCCTGCCATC  598

seq1  TGCTTGCTGGGATGTGTCCCAACGCTTCTGCTCTGGCTTCTGGACAGGGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCTGGGATGTGTCCCAACGCTTCTGCTCTGGCTTCTGGACAGGGC  648

seq1  TTGCAGACTGGCAGCCCCTGGTCTGCTTGAACCAATGGGTGGGGGTGGGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACTGGCAGCCCCTGGTCTGCTTGAACCAATGGGTGGGGGTGGGG  698

seq1  GGGAGAGGACAACTGGTGCCCATTTTTTTTTTTAAATTCATGACATCAAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGACAACTGGTGCCCATTTTTTTTTTTAAATTCATGACATCAAT  748

seq1  ATCTTTGAAAGATGCTTCAGGTTCCCTGCATTTCTTGAAAACTCGGCGGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGAAAGATGCTTCAGGTTCCCTGCATTTCTTGAAAACTCGGCGGC  798

seq1  CCTTGCTATTTATTTAAGCTCTCTTTCTAAGTGGTGCTGGTTGGCAGGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTATTTATTTAAGCTCTCTTTCTAAGTGGTGCTGGTTGGCAGGAG  848

seq1  CTGAGCCACTACTGCCCCTTCAGGACAGAACCTACTTTGCATTTGGTCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCACTACTGCCCCTTCAGGACAGAACCTACTTTGCATTTGGTCAG  898

seq1  AAAACTCCCCAGCCCCTCCCCGAAGCACAGCACCCACTGTAGGAATTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCCCCAGCCCCTCCCCGAAGCACAGCACCCACTGTAGGAATTC  946