BAC Information

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BAC

Clone NameB6Ng01-032M11
Chromosome8 (Build37)
Map Location 26,202,960 - 26,328,019
singlet/doubletdoublet
Overlap genePlekha2, LOC100042390, Tacc1
Upstream gene1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2, Htra4
Downstream geneLOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1, Ppapdc1, Bag4, Lsm1, Star, Ash2l, Kcnu1, Hgsnat, 4930444A02Rik, Fnta, Hook3, 1700047A11Rik, Rnf170, Thap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032M11.bB6Ng01-032M11.g
ACCDH862014DH862015
length688706
definitionDH862014|Mus musculus domesticus DNA, BAC clone: B6Ng01-032M11, 5' end.DH862015|Mus musculus domesticus DNA, BAC clone: B6Ng01-032M11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,327,334 - 26,328,019)(26,202,960 - 26,203,662)
sequence
gaattcctgatagaggtggcccattcacctcagggcaactggcaagcaaa
gagaagcaacagaggaccaaggtcttcccactgtctcctccaaggcatcc
ccctccccccccccccaatatcctgatttctttctttaagacttatctct
taaaggtcctgtcacctcttaggagtgctgtcagctggtgaccaagcctt
taatgcgtgggcctttgatgaatattggtgcttagttgggcagtgatggt
atcttctccccttgaccgaattaagtgctccagtcgtcctgctcctgggt
ataccttggctgtgcctggatgagcaccgggatttcccctttcctgctca
gcttcttggggcacattgttctgtgtgggaaatgctgttacattaatgta
tttcacacaggatagcttataaattacatctctatttgtttatagaattg
ggatctgtttcaatcagcagaatatagcataggctggcagaattctgtca
tttgtaaaatttagaataaaagaatgaaggcacacacacacactatacat
atatatatgtatatatagttatatatatatagttttatatatttatagtt
atagttatatagttattgccttatttagggttttactgctgtgatcaatc
accatgaccaaggtaactctttctaagggcaacatttt
gaattccatgctgatctagatgttcggtagaatttaagttcttagcattg
caataaatggaaatagggtatatagttcacactagcatgaaaaatggcac
atgcctctaatcctagaagttgggagatagaaccaggcagatctctgtga
gtccaaggccagtctgggctatgtagtttattcatgtagaccctgaattt
aataattaattaattaattaattaatcagttaattaattaatttaataat
gttttaagtaaaaattagagagagtgagttccctgggttgctgactaaca
agcagaatgaagtaggctaactggccattcaactggaattcctgaccagg
acttgctaggcagtgagacacacttgtgatagtcctaggccgcccatttc
accctgttatgagaggtctccagaggctcctacccaaaaatatttcttca
accactaggtaggctaacccagaaattttaaactttaataggcctgcatc
ctaatagagacagatgcatcagagccttaagaaagtagaccacaccctgg
agggtagacagaggcaccaggaaggttgagctcaaaacagatatcactct
cttgggtggggcggggtgggaggtcctagggatttttatacacctgggac
ctttctgaaaagcattttggcagtattggaacaagacagctaaaaatgtt
tcctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_26327334_26328019
seq2: B6Ng01-032M11.b_47_733 (reverse)

seq1  AAATGTTGCCCTTAG-AAGAGTTACCTTGGTCATGGTGATTGATCACAGC  49
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAATGTTGCCCTTAGAAAGAGTTACCTTGGTCATGGTGATTGATCACAGC  50

seq1  AGTAAAACCCTAAATAAGGCAATAACTATATAACTATAACTATAAATATA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAACCCTAAATAAGGCAATAACTATATAACTATAACTATAAATATA  100

seq1  TAAAACTATATATATATAACTATATATACATATATATATGTATAGTGTGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTATATATATATAACTATATATACATATATATATGTATAGTGTGT  150

seq1  GTGTGTGCCTTCATTCTTTTATTCTAAATTTTACAAATGACAGAATTCTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCCTTCATTCTTTTATTCTAAATTTTACAAATGACAGAATTCTG  200

seq1  CCAGCCTATGCTATATTCTGCTGATTGAAACAGATCCCAATTCTATAAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTATGCTATATTCTGCTGATTGAAACAGATCCCAATTCTATAAAC  250

seq1  AAATAGAGATGTAATTTATAAGCTATCCTGTGTGAAATACATTAATGTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAGATGTAATTTATAAGCTATCCTGTGTGAAATACATTAATGTAA  300

seq1  CAGCATTTCCCACACAGAACAATGTGCCCCAAGAAGCTGAGCAGGAAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTCCCACACAGAACAATGTGCCCCAAGAAGCTGAGCAGGAAAGG  350

seq1  GGAAATCCCGGTGCTCATCCAGGCACAGCCAAGGTATACCCAGGAGCAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCCCGGTGCTCATCCAGGCACAGCCAAGGTATACCCAGGAGCAGG  400

seq1  ACGACTGGAGCACTTAATTCGGTCAAGGGGAGAAGATACCATCACTGCCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACTGGAGCACTTAATTCGGTCAAGGGGAGAAGATACCATCACTGCCC  450

seq1  AACTAAGCACCAATATTCATCAAAGGCCCACGCATTAAAGGCTTGGTCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGCACCAATATTCATCAAAGGCCCACGCATTAAAGGCTTGGTCAC  500

seq1  CAGCTGACAGCACTCCTAAGAGGTGACAGGACCTTTAAGAGATAAGTCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGACAGCACTCCTAAGAGGTGACAGGACCTTTAAGAGATAAGTCTT  550

seq1  AAAGAAAGAAATCAGGATATTGGGGGGGGGGGGAGGGGGATGCCTTGGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAATCAGGATATTGGGGGGGGGGGGAGGGGGATGCCTTGGAG  600

seq1  GAGACAGTGGGAAGACCTTGGTCCTCTGTTGCTTCTCTTTGCTTGCCAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGTGGGAAGACCTTGGTCCTCTGTTGCTTCTCTTTGCTTGCCAGT  650

seq1  TGCCCTGAGGTGAATGGGCCACCTCTATCAGGAATTC  686
      |||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGAGGTGAATGGGCCACCTCTATCAGGAATTC  687

seq1: chr8_26202960_26203662
seq2: B6Ng01-032M11.g_70_775

seq1  GAATTCCATGCTGATCTAGATGTTCGGTAGAATTTAAGTTCTTAGCATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCTGATCTAGATGTTCGGTAGAATTTAAGTTCTTAGCATTG  50

seq1  CAATAAATGGAAATAGGGTATATAGTTCACACTAGCATGAAAAATGGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATGGAAATAGGGTATATAGTTCACACTAGCATGAAAAATGGCAC  100

seq1  ATGCCTCTAATCCTAGAAGTTGGGAGATAGAACCAGGCAGATCTCTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCTAATCCTAGAAGTTGGGAGATAGAACCAGGCAGATCTCTGTGA  150

seq1  GTCCAAGGCCAGTCTGGGCTATGTAGTTTATTCATGTAGACCCTGAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGGCCAGTCTGGGCTATGTAGTTTATTCATGTAGACCCTGAATTT  200

seq1  AATAATTAATTAATTAATTAATTAATCAGTTAATTAATTAATTTAATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTAATTAATTAATTAATTAATCAGTTAATTAATTAATTTAATAAT  250

seq1  GTTTTAAGTAAAAATTAGAGAGAGTGAGTTCCCTGGGTTGCTGACTAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAGTAAAAATTAGAGAGAGTGAGTTCCCTGGGTTGCTGACTAACA  300

seq1  AGCAGAATGAAGTAGGCTAACTGGCCATTCAACTGGAATTCCTGACCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAATGAAGTAGGCTAACTGGCCATTCAACTGGAATTCCTGACCAGG  350

seq1  ACTTGCTAGGCAGTGAGACACACTTGTGATAGTCCTAGGCCGCCCATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTAGGCAGTGAGACACACTTGTGATAGTCCTAGGCCGCCCATTTC  400

seq1  ACCCTGTTATGAGAGGTCTCCAGAGGCTCCTACCCAAAAATATTTCTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTTATGAGAGGTCTCCAGAGGCTCCTACCCAAAAATATTTCTTCA  450

seq1  ACCACTAGGTAGGCTAACCCAGAAATTTTAAACTTTAATAGGCCTGCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTAGGTAGGCTAACCCAGAAATTTTAAACTTTAATAGGCCTGCATC  500

seq1  CTAATAGAGACAGATGCATCAGAGCCTTAAGAAAGTAGACCACACCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGAGACAGATGCATCAGAGCCTTAAGAAAGTAGACCACACCCTGG  550

seq1  AGGGTAGACAGAGGCACCAGGAAGGTTGAGCTCAAAACAGATATCACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGACAGAGGCACCAGGAAGGTTGAGCTCAAAACAGATATCACTCT  600

seq1  CTTGGGTGGGGCGGGGTGGGAGGTCCTA-GGATTTTTATACACCTGGGAC  649
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTTGGGTGGGGCGGGGTGGGAGGTCCTAGGGATTTTTATACACCTGGGAC  650

seq1  CTTTCTGAAAAGCATTTTGGCAGTA-TGGAACAAGACAGCTAAAAATG-T  697
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  CTTTCTGAAAAGCATTTTGGCAGTATTGGAACAAGACAGCTAAAAATGTT  700

seq1  TCCTGC  703
      ||||||
seq2  TCCTGC  706