BAC Information

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BAC

Clone NameB6Ng01-032N15
Chromosome8 (Build37)
Map Location 19,240,567 - 19,241,218
singlet/doubletsinglet
Overlap geneEG574081
Upstream geneLOC100040466, Mcph1, Angpt2, Agpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34, EG546038, Spag11, Defb14, Defb4, EG654452, Defb6
Downstream geneDefb5, Defb3, Defb54-ps, LOC100040504, LOC100040514, Defb8, LOC100040528, LOC100041511, Defb7, LOC670326, LOC100040561, LOC624198, EG665730, 4930467E23Rik, LOC100041567, LOC547150, LOC100040599, EG665822, 6820431F20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032N15.bB6Ng01-032N15.g
ACCDH862068DH862069
length602652
definitionDH862068|Mus musculus domesticus DNA, BAC clone: B6Ng01-032N15, 5' end.DH862069|Mus musculus domesticus DNA, BAC clone: B6Ng01-032N15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccacattttataatggggttatttgaat
ttctggagtccagcttcttgagctctttgtatatattggatattagtccc
ctatcagatttaggattggtaaaaaagataacagtattttttgccttaca
gaagatttgaaattttatgaggtctcatttgtcgattcttgatcttacac
cacaagccattgctgttctttttatgattttccccagtgccatatctttg
aggcttttccccactttctcctcctgagcctatgcaatgcctggtaaata
cagaagtgaatgctcacagtcacctattggatggaacatagggcccccaa
tgggggagctagagaaagtacccaaggagctacagaaatctgcaagataa
taggtggaacaaaaatatgaactaaccagtaaccccagagctcatgtatc
tagctgcatatgaagcagaaaatagcctagttggccatcattgggaagaa
aggccccttggtattgcaaactttatatgccccagtacagggggacacca
gggccaagaacagggagtgggtgggtaggtgagcagggcatgggggaggg
ta
gaattctttgcaatgagcagcccagcctctttttgagaacttcctctccc
tatatccccatggaagacccttaagcacacattgtctacagttgctcagg
ggaggctatggatcacagttactcaaactctgctgaaattgtattttgtg
aaaaatgtttatattcttttaaattatgtgcacatgtatggatctgtcat
gtgcatgtgccaagcactacagtacccacagaggccatgaaaggacatac
aatctctcagagatggggttataggcacatatgggttgcctgatgtggta
ctaggaatttatcccagggcttctgcaggagcagtatgcactcctaattg
ctgagccatctttccaggatccaggttgtatttcatccttgacattaagt
aaacagaaggaaagggatgtaccactcaagacagagaactgaaacaagag
agaacatgaaatgaatgaagcaaaggcctcaaactgcatcagacagaaaa
tatagagataaaaacataatttcactcattttgttgctgggttctggttt
acagaggagaatctctgttccatgagatatacagacattaactctgtctg
acatttagaggaatgcaaagaaggagggggagggagtgaaggataagttt
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_19240567_19241218
seq2: B6Ng01-032N15.g_71_722

seq1  GAATTCTTTGCAATGAGCAGCCCAGCCTCTTTTTGAGAACTTCCTCTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCAATGAGCAGCCCAGCCTCTTTTTGAGAACTTCCTCTCCC  50

seq1  TATATCCCCATGGAAGACCCTTAAGCACACATTGTCTACAGTTGCTCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCCCATGGAAGACCCTTAAGCACACATTGTCTACAGTTGCTCAGG  100

seq1  GGAGGCTATGGATCACAGTTACTCAAACTCTGCTGAAATTGTATTTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTATGGATCACAGTTACTCAAACTCTGCTGAAATTGTATTTTGTG  150

seq1  AAAAATGTTTATATTCTTTTAAATTATGTGCACATGTATGGATCTGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTTTATATTCTTTTAAATTATGTGCACATGTATGGATCTGTCAT  200

seq1  GTGCATGTGCCAAGCACTACAGTACCCACAGAGGCCATGAAAGGACATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTGCCAAGCACTACAGTACCCACAGAGGCCATGAAAGGACATAC  250

seq1  AATCTCTCAGAGATGGGGTTATAGGCACATATGGGTTGCCTGATGTGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTCAGAGATGGGGTTATAGGCACATATGGGTTGCCTGATGTGGTA  300

seq1  CTAGGAATTTATCCCAGGGCTTCTGCAGGAGCAGTATGCACTCCTAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAATTTATCCCAGGGCTTCTGCAGGAGCAGTATGCACTCCTAATTG  350

seq1  CTGAGCCATCTTTCCAGGATCCAGGTTGTATTTCATCCTTGACATTAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCATCTTTCCAGGATCCAGGTTGTATTTCATCCTTGACATTAAGT  400

seq1  AAACAGAAGGAAAGGGATGTACCACTCAAGACAGAGAACTGAAACAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAGGAAAGGGATGTACCACTCAAGACAGAGAACTGAAACAAGAG  450

seq1  AGAACATGAAATGAATGAAGCAAAGGCCTCAAACTGCATCAGACAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATGAAATGAATGAAGCAAAGGCCTCAAACTGCATCAGACAGAAAA  500

seq1  TATAGAGATAAAAACATAATTTCACTCATTTTGTTGCTGGGTTCTGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGATAAAAACATAATTTCACTCATTTTGTTGCTGGGTTCTGGTTT  550

seq1  ACAGAGGAGAATCTCTGTTCCATGAGATATACAGACATTAACTCTGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGAGAATCTCTGTTCCATGAGATATACAGACATTAACTCTGTCTG  600

seq1  ACATTTAGAGGAATGCAAAGAAGGAGGGGGAGGGAGTGAAGGATAAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAGAGGAATGCAAAGAAGGAGGGGGAGGGAGTGAAGGATAAGTTT  650

seq1  AA  652
      ||
seq2  AA  652