BAC Information

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BAC

Clone NameB6Ng01-033B06
Chromosome8 (Build37)
Map Location 78,482,251 - 78,483,373
singlet/doubletsinglet
Overlap gene1700007B14Rik
Upstream geneHmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2, LOC675507, LOC384845, LOC666211, LOC100039229, LOC666036
Downstream geneLOC100039185, EG631594, LOC666226, LOC100039211, LOC384847, Nr3c2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033B06.bB6Ng01-033B06.g
ACCDH862230DH862231
length1,113388
definitionDH862230|Mus musculus domesticus DNA, BAC clone: B6Ng01-033B06, 5' end.DH862231|Mus musculus domesticus DNA, BAC clone: B6Ng01-033B06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatggtacacaaccatatatgcagttcaagcatactaactact
taattgcttaatcattgcatactatactgcattacctttcaataaatata
cagttttaaataaccataagttttctctaagggttagtcatctaaggtaa
ctatcacagagtgaccatagtggtaactttttgttggactctggggaggc
ctttgtggcattgttgggttgctgacttctctaacagagtttgaaatatg
atcagatagttaatgatcatggctatcattttaacaataataatctttat
taagactcattatgtaccacaagctatctatcattctctcagaaaaaaat
gcttcttcctattcacaaatgaagaagctgatagtaacagggttagcatc
ttactatgttgaacattatttattttttcagataaatatttattatttga
aagtttggttatgtttatttttctattcacttagtttgcattttggttta
taaccttaaatgtactatttgttacagacttgttgattgttatttgcaag
tttcaaaatggtttaaaataagctacattcagaataaaatgaataaatga
aatttcagacttgtttgataaatatttgagcatgcatgtatacatacgtt
aagtataatctaagaatttttataaagcaatctcataatagaatataaac
cctgtaggacagcgaggttattaacatgttagagtcactcagacactaag
tagcagaaagaagatataaatgcaagttggattttggcatagtgggtatt
tttctttaagtttgctagttccaactttaacttttgttctcttctcaaca
acctaacttcagtaaaaaccaatatgtaaccaaattatcacatattttta
ccaaattatttatattatacttctctgaatttttttaggagatgatctgg
gactgaatgaataatgtatagagctctgacttcatcaacagactaaatcc
ttgggtgaagcatagttttggtggcatttttgggaggcatagagaacaga
gttgggtcgagtaaaggaccagtgactcatcctctaaagggagatctttc
cttgctttgctct
tgggaggagaggagttaaggacacctggagaacaaggtctttgaatcaac
taagcagaattcatggggcctcacagagactgaagtagcagtctcagagc
ctgcataggtttgtgctaggtcatctacatatgtcattgttgttggctta
gtgtttgggaagactcctgacaatgggagtagggggtgtcttgaactttt
ttggcctgttcttgggtctctttttcctcctactggacttccttacccag
tttcaatgcaagggtttgtgcctggttttattgtatctttttatgctgtg
ttcacttgatgtccttgggaggcctgctgtttttctggggaaagtcaggc
atttatttgtgggagaagaggtaggggaaagtggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_78482251_78483373
seq2: B6Ng01-033B06.b_46_1158 (reverse)

seq1  AGAGCAAAAGACAAGGAAAAGATACTCCCTTTAGAGGATGAGTCACCTGT  50
      ||||||||   ||||| |||||| ||||||||||||||||||||| ||| 
seq2  AGAGCAAA--GCAAGG-AAAGAT-CTCCCTTTAGAGGATGAGTCA-CTG-  44

seq1  GTCCTCTAACTCAGACCCAACTCTGGTCTCTATGCCTCCCAATAATGCCA  100
      ||||| | |||| |||||||||||| |||||||||||||||| |||||||
seq2  GTCCT-TTACTC-GACCCAACTCTGTTCTCTATGCCTCCCAAAAATGCCA  92

seq1  CCAAAACTATGGCTTCACCCAAGGATTTAGTCTGTTGATGAAGTCAGAGC  150
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACTAT-GCTTCACCCAAGGATTTAGTCTGTTGATGAAGTCAGAGC  141

seq1  TCTGATACATTATTCATTCAGTCCCAGATCATCTCCTAAAAAAATTCAGA  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCT-ATACATTATTCATTCAGTCCCAGATCATCTCCTAAAAAAATTCAGA  190

seq1  GAAGTATAATATAAATAATTTGGTAAAAATATGTGATAATTTGGTTACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATAATATAAATAATTTGGTAAAAATATGTGATAATTTGGTTACAT  240

seq1  ATTGGTTTTTACTGAAGTTAGGTTGTTGAGAAGAGAACAAAAGTTAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTTTTACTGAAGTTAGGTTGTTGAGAAGAGAACAAAAGTTAAAGT  290

seq1  TGGAACTAGCAAACTTAAAGAAAAATACCCACTATGCCAAAATCCAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTAGCAAACTTAAAGAAAAATACCCACTATGCCAAAATCCAACTT  340

seq1  GCATTTATATCTTCTTTCTGCTACTTAGTGTCTGAGTGACTCTAACATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTATATCTTCTTTCTGCTACTTAGTGTCTGAGTGACTCTAACATGT  390

seq1  TAATAACCTCGCTGTCCTACAGGGTTTATATTCTATTATGAGATTGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACCTCGCTGTCCTACAGGGTTTATATTCTATTATGAGATTGCTTT  440

seq1  ATAAAAATTCTTAGATTATACTTAACGTATGTATACATGCATGCTCAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATTCTTAGATTATACTTAACGTATGTATACATGCATGCTCAAAT  490

seq1  ATTTATCAAACAAGTCTGAAATTTCATTTATTCATTTTATTCTGAATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAAACAAGTCTGAAATTTCATTTATTCATTTTATTCTGAATGTA  540

seq1  GCTTATTTTAAACCATTTTGAAACTTGCAAATAACAATCAACAAGTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTTTAAACCATTTTGAAACTTGCAAATAACAATCAACAAGTCTGT  590

seq1  AACAAATAGTACATTTAAGGTTATAAACCAAAATGCAAACTAAGTGAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAGTACATTTAAGGTTATAAACCAAAATGCAAACTAAGTGAATA  640

seq1  GAAAAATAAACATAACCAAACTTTCAAATAATAAATATTTATCTGAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAAACATAACCAAACTTTCAAATAATAAATATTTATCTGAAAAA  690

seq1  ATAAATAATGTTCAACATAGTAAGATGCTAACCCTGTTACTATCAGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAATGTTCAACATAGTAAGATGCTAACCCTGTTACTATCAGCTTC  740

seq1  TTCATTTGTGAATAGGAAGAAGCATTTTTTTCTGAGAGAATGATAGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGTGAATAGGAAGAAGCATTTTTTTCTGAGAGAATGATAGATAG  790

seq1  CTTGTGGTACATAATGAGTCTTAATAAAGATTATTATTGTTAAAATGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGTACATAATGAGTCTTAATAAAGATTATTATTGTTAAAATGATA  840

seq1  GCCATGATCATTAACTATCTGATCATATTTCAAACTCTGTTAGAGAAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGATCATTAACTATCTGATCATATTTCAAACTCTGTTAGAGAAGTC  890

seq1  AGCAACCCAACAATGCCACAAAGGCCTCCCCAGAGTCCAACAAAAAGTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCCAACAATGCCACAAAGGCCTCCCCAGAGTCCAACAAAAAGTTA  940

seq1  CCACTATGGTCACTCTGTGATAGTTACCTTAGATGACTAACCCTTAGAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATGGTCACTCTGTGATAGTTACCTTAGATGACTAACCCTTAGAGA  990

seq1  AAACTTATGGTTATTTAAAACTGTATATTTATTGAAAGGTAATGCAGTAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTATGGTTATTTAAAACTGTATATTTATTGAAAGGTAATGCAGTAT  1040

seq1  AGTATGCAATGATTAAGCAATTAAGTAGTTAGTATGCTTGAACTGCATAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCAATGATTAAGCAATTAAGTAGTTAGTATGCTTGAACTGCATAT  1090

seq1  ATGGTTGTGTACCATGTGAATTC  1123
      |||||||||||||||||||||||
seq2  ATGGTTGTGTACCATGTGAATTC  1113