BAC Information

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BAC

Clone NameB6Ng01-033J08
Chromosome8 (Build37)
Map Location 41,399,883 - 41,558,648
singlet/doubletdoublet
Overlap gene2900075B16Rik, Zdhhc2
Upstream geneEG621335, LOC434304, Msr1, EG621431, LOC100039072, LOC666959, EG632166, Fgf20
Downstream geneCnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2, Pdgfrl, Mtus1, Fgl1, Pcm1, Asah1, Frg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033J08.bB6Ng01-033J08.g
ACCDH862590DH862591
length1,029330
definitionDH862590|Mus musculus domesticus DNA, BAC clone: B6Ng01-033J08, 5' end.DH862591|Mus musculus domesticus DNA, BAC clone: B6Ng01-033J08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,557,614 - 41,558,648)(41,399,883 - 41,400,212)
sequence
gaattcttaaggtaaaagacaaaagtgcagaatttaagatcctctcctgg
agacatttttcaaatttctgaattgatttgtgttctttcactttgaatac
tttgtattgtgaatcagttaccattttttaacatgccacagtaaagatga
attctgtttgacgggagtctcgttcaacaataagatatgaaattgtgtaa
cagacttttccctccgccttcacctgtgaaaaacagaggctagtaaaaga
aaagcgggtgcactctcaccggctttgcccttcccagggtttgcgctgct
ctctgtccaggtctgagaatccttaaggagatggctctgggactctctca
gaggctttgcaggaaactggtggttttcaggactgacaaaaaaataatca
gaagcccaagtcaactcttaatagcacagctgaatatttctcaaaaaaaa
tgaaatgcagacctctcgcaatgcaaggcgctcttgggaaagacccatga
caaccaaggactacaaggaaaatacataaaaccaggttctctactagaga
accattctgttttgtcttcttgcattccaggttatgctaaagtgacagtc
cccaactccgagaaatgtcgatttggcatacagaaaatgttctgagggtc
caataacactatattctgtttagcatgcaagataatttagtaagcatgca
atagcatttatttgatgacagtttattaagttttatttatgccacgtgat
cctagcttctcacgataatggttttgaaataagattgagggccatgaatt
tgggctccatttgttttccaagcatgaggtcctgagttcacatcttagac
ctcggtaaatgccgggtgggcgtggcagtctgactgaatgggattcctca
gaacactgagaaagggcttctctggagcaaataagctacctaggctagtc
aacatgagactatagagtcagtacagggatgggtaaagacatcctcagtt
acacaatacaggagagcttggctgcctcc
atttcatttagatgagagactctgaactatgtttaaatgctgaaaaagaa
gtaaaagattaaactgaaacagaggttcgtttgttgccaagcagacaaat
ggaaatggagattaaagtggggagtttactcttaggtagtggagggtgtg
ggtcatttcctttctaatgggggagagagggggaaatagtctatatgact
gttcattagcaaggaagagaagttcttgactaatgtcttgtgcttactgt
atgaaataggaggtaatagcattctgagagcaaactgtgcacacaagaaa
catatttgggggagggttaagagtcgttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_41557614_41558648
seq2: B6Ng01-033J08.b_43_1071 (reverse)

seq1  GGAGGCAGCCAGGCTCTCCTGTTATTGTGTAACTGAGGATGTCTTTACCC  50
      ||||||||||| ||||||||| ||||||||||||||||||||||||||||
seq2  GGAGGCAGCCAAGCTCTCCTG-TATTGTGTAACTGAGGATGTCTTTACCC  49

seq1  ATCCCTGTACTGGACTCTATAGGTCTTCATGTTGACTAGCCTAGGTAGCT  100
      ||||||||||| ||||||||| ||| ||||||||||||||||||||||||
seq2  ATCCCTGTACT-GACTCTATA-GTC-TCATGTTGACTAGCCTAGGTAGCT  96

seq1  TATTTGCTCCAGAGAAGCCCTTTCTCAAGTGTTCTGAGGAATCCCATTTC  150
      |||||||||||||||||||||||||| ||||||||||||||||||| |||
seq2  TATTTGCTCCAGAGAAGCCCTTTCTC-AGTGTTCTGAGGAATCCCA-TTC  144

seq1  AGTCAGACTGCCACGCCCACCCGGCATTTACCGAGGTCTAAGATGTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGACTGCCACGCCCACCCGGCATTTACCGAGGTCTAAGATGTGAAC  194

seq1  TCAGGACCTCATGCTTGGAAAACAAATGGAGCCCAAATTCATGGCCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACCTCATGCTTGGAAAACAAATGGAGCCCAAATTCATGGCCCTCA  244

seq1  ATCTTATTTCAAAACCATTATCGTGAGAAGCTAGGATCACGTGGCATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATTTCAAAACCATTATCGTGAGAAGCTAGGATCACGTGGCATAAA  294

seq1  TAAAACTTAATAAACTGTCATCAAATAAATGCTATTGCATGCTTACTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTAATAAACTGTCATCAAATAAATGCTATTGCATGCTTACTAAA  344

seq1  TTATCTTGCATGCTAAACAGAATATAGTGTTATTGGACCCTCAGAACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTGCATGCTAAACAGAATATAGTGTTATTGGACCCTCAGAACATT  394

seq1  TTCTGTATGCCAAATCGACATTTCTCGGAGTTGGGGACTGTCACTTTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATGCCAAATCGACATTTCTCGGAGTTGGGGACTGTCACTTTAGC  444

seq1  ATAACCTGGAATGCAAGAAGACAAAACAGAATGGTTCTCTAGTAGAGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTGGAATGCAAGAAGACAAAACAGAATGGTTCTCTAGTAGAGAAC  494

seq1  CTGGTTTTATGTATTTTCCTTGTAGTCCTTGGTTGTCATGGGTCTTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTTATGTATTTTCCTTGTAGTCCTTGGTTGTCATGGGTCTTTCCC  544

seq1  AAGAGCGCCTTGCATTGCGAGAGGTCTGCATTTCATTTTTTTTGAGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCGCCTTGCATTGCGAGAGGTCTGCATTTCATTTTTTTTGAGAAAT  594

seq1  ATTCAGCTGTGCTATTAAGAGTTGACTTGGGCTTCTGATTATTTTTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCTGTGCTATTAAGAGTTGACTTGGGCTTCTGATTATTTTTTTGT  644

seq1  CAGTCCTGAAAACCACCAGTTTCCTGCAAAGCCTCTGAGAGAGTCCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTGAAAACCACCAGTTTCCTGCAAAGCCTCTGAGAGAGTCCCAGA  694

seq1  GCCATCTCCTTAAGGATTCTCAGACCTGGACAGAGAGCAGCGCAAACCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTCCTTAAGGATTCTCAGACCTGGACAGAGAGCAGCGCAAACCCT  744

seq1  GGGAAGGGCAAAGCCGGTGAGAGTGCACCCGCTTTTCTTTTACTAGCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGGCAAAGCCGGTGAGAGTGCACCCGCTTTTCTTTTACTAGCCTC  794

seq1  TGTTTTTCACAGGTGAAGGCGGAGGGAAAAGTCTGTTACACAATTTCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCACAGGTGAAGGCGGAGGGAAAAGTCTGTTACACAATTTCATA  844

seq1  TCTTATTGTTGAACGAGACTCCCGTCAAACAGAATTCATCTTTACTGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTGTTGAACGAGACTCCCGTCAAACAGAATTCATCTTTACTGTGG  894

seq1  CATGTTAAAAAATGGTAACTGATTCACAATACAAAGTATTCAAAGTGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAAAAAATGGTAACTGATTCACAATACAAAGTATTCAAAGTGAAA  944

seq1  GAACACAAATCAATTCAGAAATTTGAAAAATGTCTCCAGGAGAGGATCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAAATCAATTCAGAAATTTGAAAAATGTCTCCAGGAGAGGATCTT  994

seq1  AAATTCTGCACTTTTGTCTTTTACCTTAAGAATTC  1035
      |||||||||||||||||||||||||||||||||||
seq2  AAATTCTGCACTTTTGTCTTTTACCTTAAGAATTC  1029

seq1: chr8_41399883_41400212
seq2: B6Ng01-033J08.g_74_403

seq1  ATTTCATTTAGATGAGAGACTCTGAACTATGTTTAAATGCTGAAAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTAGATGAGAGACTCTGAACTATGTTTAAATGCTGAAAAAGAA  50

seq1  GTAAAAGATTAAACTGAAACAGAGGTTCGTTTGTTGCCAAGCAGACAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGATTAAACTGAAACAGAGGTTCGTTTGTTGCCAAGCAGACAAAT  100

seq1  GGAAATGGAGATTAAAGTGGGGAGTTTACTCTTAGGTAGTGGAGGGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGGAGATTAAAGTGGGGAGTTTACTCTTAGGTAGTGGAGGGTGTG  150

seq1  GGTCATTTCCTTTCTAATGGGGGAGAGAGGGGGAAATAGTCTATATGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTTCCTTTCTAATGGGGGAGAGAGGGGGAAATAGTCTATATGACT  200

seq1  GTTCATTAGCAAGGAAGAGAAGTTCTTGACTAATGTCTTGTGCTTACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTAGCAAGGAAGAGAAGTTCTTGACTAATGTCTTGTGCTTACTGT  250

seq1  ATGAAATAGGAGGTAATAGCATTCTGAGAGCAAACTGTGCACACAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATAGGAGGTAATAGCATTCTGAGAGCAAACTGTGCACACAAGAAA  300

seq1  CAGATTTGGGGGAGGGTAAAGAGTCGCTGT  330
      || |||||||||||||| |||||||| |||
seq2  CATATTTGGGGGAGGGTTAAGAGTCGTTGT  330