BAC Information

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BAC

Clone NameB6Ng01-034G01
Chromosome8 (Build37)
Map Location 18,124,016 - 18,125,076
singlet/doubletsinglet
Overlap genenone
Upstream geneCsmd1, LOC665638
Downstream geneLOC100040466, Mcph1, Angpt2, Agpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034G01.bB6Ng01-034G01.g
ACCDH863148DH863149
length1,0351,066
definitionDH863148|Mus musculus domesticus DNA, BAC clone: B6Ng01-034G01, 5' end.DH863149|Mus musculus domesticus DNA, BAC clone: B6Ng01-034G01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatttttttaatggggttatttgat
tttctggagtccaccttcttgagttctttatatatattggatattagtcc
cctatctgttttgggataggtaaagatcctttcccaatctgttggtggcc
tttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttt
atgaggtcccatttatcgattcttgatcttacagcacaagccattgctgt
tctattcaggaatttttaccctgtacccatatcttcgaggcttttcccta
ctttctcctctataagtttcagtgtctctggttttatgtgaagttcctta
atccacttagatttgaccttagtacaaggagatagaaatggatcaattca
cattcttctacatgataaccgccagttgtaccagcaccaattgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatctctgggtctttaattctcttccattg
gtttacttgtctgtcactataccagtaccatgcagttttgatcacaattg
ctctgtagtacagttttaggtccggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctcggttttttgttattccagat
gaatctgccgattgccctttctaatttgttgaagattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcagatggccatttt
tacatgttgatcctgccaatccatgagcatgggggatctttccatcttct
gagatctctttatttctttctttagagacttgagtgcttatcatacagat
ctttcactgcctagagccatgccaaggtattttatattatttgtgactat
tgagaggtgttgtttccatctttcttctatcctgatatacctttggtaaa
aaaggccatggactgtgttgatcatattttactca
gaattccataatttgttcatttttagttggagaaaagttgggaccaggat
gacgtttgttaattgtattaatgactaaaacatgacttatcaagacaatg
cagaattttcacatttttattttttttttatttgctacagttccaaagac
ttaaccaagagctcatgtatgctaggcaagtcctctctgccgtgttgtat
gcccattacgctcacaatttataaaagtgaatatacatttgtatcaatat
tcttaatgcagaaaacatcggcaaaatgggtcatggacgctgttgtcagt
aacatgcttgccataaagccagaggatcccagtctgatcccaaaaaccca
tatgaaagccagatgtaaaagcctgtgttgaaacaattaggttagagttg
gtatgattgccagaaattgctgaccaatctagttgattagtgagcttcag
attcagtggcctgtaaaagacagagaaagagagacactgatatccacttc
tggttttcacacacccaaccactgtctatagtcaacatgtgtgcactata
caaacacatatatacagatgtgcctcgtacacaataaaataggtttattc
aatgtataaagcatcaatatcacaagggatagggcaaaattacagaactg
atactcagtgaaggtaaaccaacagtagagctgtctccctccttccagag
ggaagactgctgctattcctatagaaacagcaactaaacagtgaagaacc
aactacatcagcacaaggagagaaactgaatttcacagggcaggactgtt
ctagttaataagaatcatgactttggtgctacatcatctatgagccagaa
aactcccccagagtctcaagcgctgcagagtgagctgaggcacatcatct
ggatgacaggagagtgagctgagcacatctggatgacacagagtgagctg
aggcacatctaggatgaagagactttcattcttcacttcctttgtcttct
ttaatatttctgcttgaaagaaccttgctcctctactccttgtaatggtt
tcccacttgtgaccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_18124016_18125076
seq2: B6Ng01-034G01.g_69_1134

seq1  GAATTCCATAATTTGTTCATTTTTAGTTGGAGAAAAGTTGGGACCAGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAATTTGTTCATTTTTAGTTGGAGAAAAGTTGGGACCAGGAT  50

seq1  GACGTTTGTTAATTGTATTAATGACTAAAACATGACTTATCAAGACAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTTGTTAATTGTATTAATGACTAAAACATGACTTATCAAGACAATG  100

seq1  CAGAATTTTCACATTTTTATTTTTTTTTTATTTGCTACAGTTCCAAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTTCACATTTTTATTTTTTTTTTATTTGCTACAGTTCCAAAGAC  150

seq1  TTAACCAAGAGCTCATGTATGCTAGGCAAGTCCTCTCTGCCGTGTTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAAGAGCTCATGTATGCTAGGCAAGTCCTCTCTGCCGTGTTGTAT  200

seq1  GCCCATTACGCTCACAATTTATAAAAGTGAATATACATTTGTATCAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTACGCTCACAATTTATAAAAGTGAATATACATTTGTATCAATAT  250

seq1  TCTTAATGCAGAAAACATCGGCAAAATGGGTCATGGACGCTGTTGTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATGCAGAAAACATCGGCAAAATGGGTCATGGACGCTGTTGTCAGT  300

seq1  AACATGCTTGCCATAAAGCCAGAGGATCCCAGTCTGATCCCAAAAACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCTTGCCATAAAGCCAGAGGATCCCAGTCTGATCCCAAAAACCCA  350

seq1  TATGAAAGCCAGATGTAAAAGCCTGTGTTGAAACAATTAGGTTAGAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAGCCAGATGTAAAAGCCTGTGTTGAAACAATTAGGTTAGAGTTG  400

seq1  GTATGATTGCCAGAAATTGCTGACCAATCTAGTTGATTAGTGAGCTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGATTGCCAGAAATTGCTGACCAATCTAGTTGATTAGTGAGCTTCAG  450

seq1  ATTCAGTGGCCTGTAAAAGACAGAGAAAGAGAGACACTGATATCCACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTGGCCTGTAAAAGACAGAGAAAGAGAGACACTGATATCCACTTC  500

seq1  TGGTTTTCACACACCCAACCACTGTCTATAGTCAACATGTGTGCACTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCACACACCCAACCACTGTCTATAGTCAACATGTGTGCACTATA  550

seq1  CAAACACATATATACAGATGTGCCTCGTACACAATAAAATAGGTTTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACATATATACAGATGTGCCTCGTACACAATAAAATAGGTTTATTC  600

seq1  AATGTATAAAGCATCAATATCACAAGGGATAGGGCAAAATTACAGAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATAAAGCATCAATATCACAAGGGATAGGGCAAAATTACAGAACTG  650

seq1  ATACTCAGTGAAGGTAAACCAACAGTAGAGCTGTCTCCCTCCTTCCAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAGTGAAGGTAAACCAACAGTAGAGCTGTCTCCCTCCTTCCAGAG  700

seq1  GGAAGACTGCTGCTATTCCTATAGAAACAGCAACTAAACAGTGAAGAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACTGCTGCTATTCCTATAGAAACAGCAACTAAACAGTGAAGAACC  750

seq1  AACTACATCAGCACAAGGAGAGAAACTGAATTTCACAGGGCAGGACTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACATCAGCACAAGGAGAGAAACTGAATTTCACAGGGCAGGACTGTT  800

seq1  CTAGTTAATAAGAATCATGACTTTGGTGCTACATCATCTATGAGCCAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTAATAAGAATCATGACTTTGGTGCTACATCATCTATGAGCCAGAA  850

seq1  AACTCCCCCAGAGTCTCAAGCGCTGCAGAGTGAGCTGAGGCACATCATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCCCAGAGTCTCAAGCGCTGCAGAGTGAGCTGAGGCACATCATCT  900

seq1  GGATGACAGGAGAGTGAGCTGAGGCACATCTGGATGACACAAGAGTGAGC  950
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  GGATGACAGGAGAGTGAGCTGA-GCACATCTGGATGACAC-AGAGTGAGC  948

seq1  TGAGGCACATCTA-GATG-AGAGACTTTCATTCTTCACTTCCTTTGTCTT  998
      ||||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  TGAGGCACATCTAGGATGAAGAGACTTTCATTCTTCACTTCCTTTGTCTT  998

seq1  CTTT-ATATTTCTGCATGAAAG-ACCTTGCTCCTCTACTCCCT-AGATGG  1045
      |||| |||||||||| |||||| |||||||||||||||||| |   ||||
seq2  CTTTAATATTTCTGCTTGAAAGAACCTTGCTCCTCTACTCCTTGTAATGG  1048

seq1  TTT-CCACTTG-GACCAA  1061
      ||| ||||||| ||||||
seq2  TTTCCCACTTGTGACCAA  1066