BAC Information

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BAC

Clone NameB6Ng01-035F08
Chromosome8 (Build37)
Map Location 25,386,673 - 25,387,616
singlet/doubletsinglet
Overlap genenone
Upstream geneSfrp1, LOC100040931, Zmat4
Downstream gene1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035F08.bB6Ng01-035F08.g
ACCDH863827DH863828
length877937
definitionDH863827|Mus musculus domesticus DNA, BAC clone: B6Ng01-035F08, 5' end.DH863828|Mus musculus domesticus DNA, BAC clone: B6Ng01-035F08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgcttagttctgtgccccattttaaaactgggttatttgttt
ttatgatggttgggagttttttgtatattttagaaactaatcttttatct
gaggcataaataaaaaggttttctcttatcccgttctgaagcctgctcca
ttcccccaaatgatggtgggctttgcggggccgaagcttcccagtgtcat
gaggtcccacttattaattgttggtcttagtgctgggctaggagtgttct
gttcagaaagtcctttcctgtgccaaggagtttaaatctactctgttttc
tcttctgtcagattcaggttctctggtcttatgttgagatctttgatgca
tttggaactgagttttgtgcagggtgataaatatggatctatttgcactc
ttcttcatggagccccccaactgcaccagcagtatttttttgaagatgct
gtctttctccagtgtgcattttgaacttctttgtcaaaactcaggtgact
gtatgtttgtggacttatatctaaacctttaattcaattagatcaatgtg
tctgtttttatgacaataacatgttatttttattactataactctacagg
gaaacttgaagtcagggatggagatactgctagaatttcttctattatct
aggattgttttagctatgtttttttttttttttttgggcgggggtggtgt
ttgtttgttgctatataaagttgaagattatttttgcagtttctgggaga
attgtgctgaaactttgatggagattgcatttaatttggttgattgattt
ttaggatgggcactttcacaatatatcctaccgatccatgaagtggatca
tccatctttagtgtcttcaagcttcta
gaattctcctctagcgaattccttgctagcttttatttaaaaaataacag
ccattccgtagtggaatgataacctttaaataactaatgggggccaccag
tgaggtgtaactcacctgtgccagggatggcttcctgtggtcctcatgag
agagcaggaagagatgtattctggcctcccactctgtgtctttggatctg
gcctagagccagagacaataaccatgaatttctgcttagatacaagtgca
gtgtttacaaggtcagacgcatagcacagcactttgacattatgtaacac
aacttttgttgtgttaatggcctcattcctatgctgataacatttctgtt
gctagtggcagagggatgcctttaaattaatagaaagggcatctgtaaat
tctaatttactacagccggatcagtccaatggatgcattgttctcaacat
aaatttcaccatggctgttggattgcactggttgagtagataattaggaa
gcaaccatcaccattactctgacatggaatacatatgcattctgttttta
gccatacttattctgacagttcaaagagaaaatttatgtacagttttcct
agcagcacgcgcagcgatgctctgtagcatgagcaaaggacacgtgagcc
tttctagttttactccttcattcaaccaatgggaagttgctgtgaagaat
agatggacttttatccaaggtcatgtagatcctgggtaaaacttggtgat
ggacccacagcttctcaagtgttatttcacatctatgcaggagaactgag
gcagcattctacagaagagatctctgtgggcttgacttctttttcattca
cactttcttctgattcaagcacactgtgtcacttttctgtacatatgttc
atgctagagagctcttgaaagctttttctttcttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25386673_25387616
seq2: B6Ng01-035F08.g_68_1004 (reverse)

seq1  AAAAGGAAAGAAAAAGCTTTTCAAGAGCTCTCTAGCAATGAACATATTGT  50
      |||| |||||||||||| |||||||||||||||||| ||||||||| |||
seq2  AAAAAGAAAGAAAAAGC-TTTCAAGAGCTCTCTAGC-ATGAACATA-TGT  47

seq1  ACAGAAAAGTTGACACAGTGTGCTTGAATCAGAAGAAAGTGTGAATGGAA  100
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  ACAGAAAAG-TGACACAGTGTGCTTGAATCAGAAGAAAGTGTGAAT-GAA  95

seq1  AAAGAAGTCAAGCCCACAGAGATCTCTTCTGTAGAATGCTGCCTCAGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTCAAGCCCACAGAGATCTCTTCTGTAGAATGCTGCCTCAGTTC  145

seq1  TCCCTGCATAGATGTGAAATAACACTTGAGAAGCTGTGGGTCCATCACCA  200
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-CCTGCATAGATGTGAAATAACACTTGAGAAGCTGTGGGTCCATCACCA  194

seq1  AGTTTTTACCCAGGATCTACATGACCTTGGATAAAAGTCCATCTATTCTT  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-TTTTACCCAGGATCTACATGACCTTGGATAAAAGTCCATCTATTCTT  243

seq1  CACAGCAACTTCCCATTGGTTGAATGAAGGAGTAAAACTAGAAAGGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAACTTCCCATTGGTTGAATGAAGGAGTAAAACTAGAAAGGCTCA  293

seq1  CGTGTCCTTTGCTCCTGCTACAGAGCATCGCTGCGCGTGCTGCTAGGAAA  350
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CGTGTCCTTTGCTCATGCTACAGAGCATCGCTGCGCGTGCTGCTAGGAAA  343

seq1  ACTGTACATAAATTTTCTCTTTGAACTGTCAGAATAAGTATGGCTAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACATAAATTTTCTCTTTGAACTGTCAGAATAAGTATGGCTAAAAA  393

seq1  CAGAATGCATATGTATTCCATGTCAGAGTAATGGTGATGGTTGCTTCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGCATATGTATTCCATGTCAGAGTAATGGTGATGGTTGCTTCCTA  443

seq1  ATTATCTACTCAACCAGTGCAATCCAACAGCCATGGTGAAATTTATGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTACTCAACCAGTGCAATCCAACAGCCATGGTGAAATTTATGTTG  493

seq1  AGAACAATGCATCCATTGGACTGATCCGGCTGTAGTAAATTAGAATTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAATGCATCCATTGGACTGATCCGGCTGTAGTAAATTAGAATTTAC  543

seq1  AGATGCCCTTTCTATTAATTTAAAGGCATCCCTCTGCCACTAGCAACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCCTTTCTATTAATTTAAAGGCATCCCTCTGCCACTAGCAACAGA  593

seq1  AATGTTATCAGCATAGGAATGAGGCCATTAACACAACAAAAGTTGTGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATCAGCATAGGAATGAGGCCATTAACACAACAAAAGTTGTGTTA  643

seq1  CATAATGTCAAAGTGCTGTGCTATGCGTCTGACCTTGTAAACACTGCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGTCAAAGTGCTGTGCTATGCGTCTGACCTTGTAAACACTGCACT  693

seq1  TGTATCTAAGCAGAAATTCATGGTTATTGTCTCTGGCTCTAGGCCAGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTAAGCAGAAATTCATGGTTATTGTCTCTGGCTCTAGGCCAGATC  743

seq1  CAAAGACACAGAGTGGGAGGCCAGAATACATCTCTTCCTGCTCTCTCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACACAGAGTGGGAGGCCAGAATACATCTCTTCCTGCTCTCTCATG  793

seq1  AGGACCACAGGAAGCCATCCCTGGCACAGGTGAGTTACACCTCACTGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCACAGGAAGCCATCCCTGGCACAGGTGAGTTACACCTCACTGGTG  843

seq1  GCCCCCATTAGTTATTTAAAGGTTATCATTCCACTACGGAATGGCTGTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCATTAGTTATTTAAAGGTTATCATTCCACTACGGAATGGCTGTTA  893

seq1  TTTTTTAAATAAAAGCTAGCAAGGAATTCGCTAGAGGAGAATTC  944
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAATAAAAGCTAGCAAGGAATTCGCTAGAGGAGAATTC  937