BAC Information

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BAC

Clone NameB6Ng01-035G10
Chromosome8 (Build37)
Map Location 111,800,557 - 111,934,050
singlet/doubletdoublet
Overlap geneGm1943, LOC100042829
Upstream geneAtbf1, 4922502B01Rik
Downstream genePmfbp1, Dhx38, Txnl4b, Hp, Dhodh, Pkd1l3, 2400003C14Rik, 4930566A11Rik, D8Ertd587e, LOC668089, LOC672735, Ap1g1, Phlppl, Marveld3, LOC100041884, Tat, Chst4, Zfp612, Gm1467, Calb2, BC025546, Hydin
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035G10.bB6Ng01-035G10.g
ACCDH863873DH863874
length703965
definitionDH863873|Mus musculus domesticus DNA, BAC clone: B6Ng01-035G10, 5' end.DH863874|Mus musculus domesticus DNA, BAC clone: B6Ng01-035G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,800,557 - 111,801,260)(111,933,073 - 111,934,050)
sequence
gaattcctagcaagccgttcccgaccaactgcagacgagataattaaggg
caaagggccgagaagtggaggatttaagattgaaggaggggcactgtgag
acagtgggtgtggatgaaaaatgctttcagatcattaggaagaaaaggtt
ggcagaatttgtcatcacgggggtaaaaaacgataccaaggttatacatc
caggactgtctggtgttactgactgttgtagcaaatattaaaaatggaat
ccgcacgtccctgcgcttgcgcacctactctctgccccaatggcctggcc
agacttgcacaggccggcaatggcagacttgtttttatctcgtggagact
ctgactcagtgctccaaaatctctccacccagctcactaaattcctactg
gcgggtctttaccatgccagtcccatgcttcaaaaccccacagcctttgt
ggtgcacatctggcaaacccacgctttgcctccgcagaaaacccaacaca
aacttagttcagaaaaaacggaaactcatttgctgggtgcaacaactaaa
atcctaatcttgtaatccttactgaatctaaatcctccggtggctaatcc
cgacggatctgccattgaaaccgggagacactcataattacacttgtcct
catgctatcctcgtccaaaaggatctctctctctccctctccctctccct
ctc
gaattccatcccctcatcttgccagccagatgggagcaaagcaggtgcaa
tctcttcaaagactccctctctggaaattaacctccgatccattccagag
gacgactggcagctcttgggcactcactggagttaagaagttttagcaaa
ctctacacaggcattaaaacaatgtttgaattagtgcggatcacagtggc
ctagattcctgtgctcctgaggaccctcttgtatctcttccatgtgtgag
atccactgaagggctgcatatggagaagactcgccagactgcagagcagg
aaggagaatttaggtcaattaccttttgaagtgggagcccttttaacagc
tactcaaggtagtatgcggcttgggaacctgtatataataaaaaaacgac
ctgtgctatttctttaaataccaccttttggttgcaagtgatcaaagtat
tcagtttgggtaaggaaaaaaaaagatcaagagaattttcatccatgttt
gttctggaatctattaagaaggattagctatgcaatttacctctctcagg
gtctgtgcttggaagttggtgcctccaattcggtctcttccagctgagcc
tttgtttttacctataaattgaagaggcaagtggcttggaaagccacatc
aggatttctgatatatatgatacacacacacatacacacaccagaacaaa
tatatgtatatatctaaatatatgtatatgtattagtcaggttctctaaa
gtcagagaacttatggaatgtctttctatattgagggaatttattatgat
gacttataatctgtagtccaactaacccaacatggtcagctgtgaatggg
aagtccaagaatctagcagttactcagtcccacaagctagttgtttcagc
tggtcttcgtagaataagttcacgatgtgctgcaagtgaatgcaagcagt
gaaaaagagatcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_111800557_111801260
seq2: B6Ng01-035G10.b_49_751

seq1  GAATTCCTAGCAAGCCGTTCCCGACCAACTGCAGACGAGATAATTAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCAAGCCGTTCCCGACCAACTGCAGACGAGATAATTAAGGG  50

seq1  CAAAGGGCCGAGAAGTGGAGGATTTAAGATTGAAGGAGGGGCACTGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGCCGAGAAGTGGAGGATTTAAGATTGAAGGAGGGGCACTGTGAG  100

seq1  ACAGTGGGTGTGGATGAAAAATGCTTTCAGATCATTAGGAAGAAAAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGGTGTGGATGAAAAATGCTTTCAGATCATTAGGAAGAAAAGGTT  150

seq1  GGCAGAATTTGTCATCACGGGGGTAAAAAACGATACCAAGGTTATACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAATTTGTCATCACGGGGGTAAAAAACGATACCAAGGTTATACATC  200

seq1  CAGGACTGTCTGGTGTTACTGACTGTTGTAGCAAATATTAAAAATGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTGTCTGGTGTTACTGACTGTTGTAGCAAATATTAAAAATGGAAT  250

seq1  CCGCACGTCCCTGCGCTTGCGCACCTACTCTCTGCCCCAATGGCCTGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCACGTCCCTGCGCTTGCGCACCTACTCTCTGCCCCAATGGCCTGGCC  300

seq1  AGACTTGCACAGGCCGGCAATGGCAGACTTGTTTTTATCTCGTGGAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGCACAGGCCGGCAATGGCAGACTTGTTTTTATCTCGTGGAGACT  350

seq1  CTGACTCAGTGCTCCAAAATCTCTCCACCCAGCTCACTAAATTCCTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCAGTGCTCCAAAATCTCTCCACCCAGCTCACTAAATTCCTACTG  400

seq1  GCGGGTCTTTACCATGCCAGTCCCATGCTTCAAAACCCCACAGCCTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGTCTTTACCATGCCAGTCCCATGCTTCAAAACCCCACAGCCTTTGT  450

seq1  GGTGCACATCTGGCAAACCCACGCTTTGCCTCCGCAGAAAACCCAACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCACATCTGGCAAACCCACGCTTTGCCTCCGCAGAAAACCCAACACA  500

seq1  AACTTAGTTCAGAAAAAACGGAAACTCATTTGCTGGGTGCAACAACTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGTTCAGAAAAAACGGAAACTCATTTGCTGGGTGCAACAACTAAA  550

seq1  ATCCTAATCTTGTAATCCTTACTGAATCTAAATCCTCCGGTGGCTAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAATCTTGTAATCCTTACTGAATCTAAATCCTCCGGTGGCTAATCC  600

seq1  CGACGGATCTGCCATTGAAACCGGGAGACACTCATAATTACAACTTGTCC  650
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CGACGGATCTGCCATTGAAACCGGGAGACACTCATAATTAC-ACTTGTCC  649

seq1  TCATGCTATCCTCGTCCAAAAGGATCTCTCTCTCTCCCTCTCCCTCTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTATCCTCGTCCAAAAGGATCTCTCTCTCTCCCTCTCCCTCTCCC  699

seq1  TCTC  704
      ||||
seq2  TCTC  703

seq1: chr8_111933073_111934050
seq2: B6Ng01-035G10.g_67_1031 (reverse)

seq1  GAAGATTCTCTCTTCTTCACCTGCTTGCACTTCACTTGCCAGCACATCTG  50
      |||||   |||||| |||| ||||||||| |||||||| ||||||||| |
seq2  GAAGA---TCTCTTTTTCA-CTGCTTGCA-TTCACTTG-CAGCACATC-G  43

seq1  TTGGAACTTATTTCTACGGAAGACCAGCTGAAACAACTAGCCTTGTGGGA  100
      |  ||||||| |||||| |||||||||||||||||||||| |||||||||
seq2  T--GAACTTA-TTCTAC-GAAGACCAGCTGAAACAACTAG-CTTGTGGGA  88

seq1  CTGAGTAACTGCTAGATTCTTGGACTTCCCATTCACAGCTGACCATTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTGAGTAACTGCTAGATTCTTGGACTTCCCATTCACAGCTGACCA-TGTT  137

seq1  GGGTTAGTTGGACTACAGATTATAAGTCATCATAATAAATTCCCTCAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGTTGGACTACAGATTATAAGTCATCATAATAAATTCCCTCAATA  187

seq1  TAGAAAGACATTCCATAAGTTCTCTGACTTTAGAGAACCCTGACTAATAC  250
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAGAAAGACATTCCATAAGTTCTCTGACTTTAGAGAA-CCTGACTAATAC  236

seq1  ATATACATATATTTAGATATATACATATATTTGTTCTGGTGTGTGTATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATATATTTAGATATATACATATATTTGTTCTGGTGTGTGTATGT  286

seq1  GTGTGTGTATCATATATATCAGAAATCCTGATGTGGC-TTCCAAGCCACT  349
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTGTGTGTATCATATATATCAGAAATCCTGATGTGGCTTTCCAAGCCACT  336

seq1  TGCCTCTTCAATTTATAGGTAAAAACAAAGGCTCAGCTGGAAGAGACCGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTTCAATTTATAGGTAAAAACAAAGGCTCAGCTGGAAGAGACCGA  386

seq1  ATTGGAGGCACCAACTTCCAAGCACAGACCCTGAGAGAGGTAAATTGCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGGCACCAACTTCCAAGCACAGACCCTGAGAGAGGTAAATTGCAT  436

seq1  AGCTAATCCTTCTTAATAGATTCCAGAACAAACATGGATGAAAATTCTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATCCTTCTTAATAGATTCCAGAACAAACATGGATGAAAATTCTCT  486

seq1  TGATCTTTTTTTTTCCTTACCCAAACTGAATACTTTGATCACTTGCAACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTTTTTTTCCTTACCCAAACTGAATACTTTGATCACTTGCAACC  536

seq1  AAAAGGTGGTATTTAAAGAAATAGCACAGGTCGTTTTTTTATTATATACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTGGTATTTAAAGAAATAGCACAGGTCGTTTTTTTATTATATACA  586

seq1  GGTTCCCAAGCCGCATACTACCTTGAGTAGCTGTTAAAAGGGCTCCCACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCCAAGCCGCATACTACCTTGAGTAGCTGTTAAAAGGGCTCCCACT  636

seq1  TCAAAAGGTAATTGACCTAAATTCTCCTTCCTGCTCTGCAGTCTGGCGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGGTAATTGACCTAAATTCTCCTTCCTGCTCTGCAGTCTGGCGAG  686

seq1  TCTTCTCCATATGCAGCCCTTCAGTGGATCTCACACATGGAAGAGATACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCATATGCAGCCCTTCAGTGGATCTCACACATGGAAGAGATACA  736

seq1  AGAGGGTCCTCAGGAGCACAGGAATCTAGGCCACTGTGATCCGCACTAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTCCTCAGGAGCACAGGAATCTAGGCCACTGTGATCCGCACTAAT  786

seq1  TCAAACATTGTTTTAATGCCTGTGTAGAGTTTGCTAAAACTTCTTAACTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACATTGTTTTAATGCCTGTGTAGAGTTTGCTAAAACTTCTTAACTC  836

seq1  CAGTGAGTGCCCAAGAGCTGCCAGTCGTCCTCTGGAATGGATCGGAGGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTGCCCAAGAGCTGCCAGTCGTCCTCTGGAATGGATCGGAGGTT  886

seq1  AATTTCCAGAGAGGGAGTCTTTGAAGAGATTGCACCTGCTTTGCTCCCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCAGAGAGGGAGTCTTTGAAGAGATTGCACCTGCTTTGCTCCCAT  936

seq1  CTGGCTGGCAAGATGAGGGGATGGAATTC  978
      |||||||||||||||||||||||||||||
seq2  CTGGCTGGCAAGATGAGGGGATGGAATTC  965