BAC Information

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BAC

Clone NameB6Ng01-035I13
Chromosome8 (Build37)
Map Location 84,218,241 - 84,329,031
singlet/doubletdoublet
Overlap geneInpp4b
Upstream geneFrem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
Downstream geneLOC671182, Il15, EG666564, LOC675800, EG666289, Zfp330
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035I13.bB6Ng01-035I13.g
ACCDH863973DH863974
length247929
definitionDH863973|Mus musculus domesticus DNA, BAC clone: B6Ng01-035I13, 5' end.DH863974|Mus musculus domesticus DNA, BAC clone: B6Ng01-035I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,218,241 - 84,218,487)(84,328,089 - 84,329,031)
sequence
acaagtataaacaaagaatgagaatggctaggcaaagctgagtgtgagca
ggtagaaaagagaaaggaccaaggggcctctcttcccaatgatggccaac
taggccatcttctgctacatatgcagctagagacacaagctctgggggta
ctggttacagtcttgcaaactttatatgccccagtacaggggaatgccag
ggccaagaagtgggagtgggtgggtaggggagaagggcagggtggag
gaattcatctgaacaagaagatttggaattatggaagatagaacaacaat
caaaagaaaatcttaaattgtgtttacatatttacctatatttccaaatt
aggaaactgaaatgagaggcttcattaaaatgatctaggcttataggctt
attttatgtgttattgtgttgctttctatgtggcataatggaaatccact
tcagaccatactaatgtttatggattctggttaaactatacgtgaaatat
ggtttacaggccagttatccatttataagctctttaaaacatttgtttat
ttgtttagttacttatttgtatgtgtgtgggcatgtgcataccatgccgt
gcatgtggaggacagaggacaaaccataggcattggttttcttcttatga
catgcaggtcccagggatagatcgtgggtcatctgggttgtataccagtg
cattacctactgagctatctcactttccccggttgcctacaggcttaagg
atgttctgttgcttctcaggttgctgtgaactggctgagtgagcagttat
atttgcatttcatggggtttgggacaagctgctgactagactggaacctg
atgccctaggataactcactcatgtgctcagatcctcaaccaagatggtt
tgccataaactgtgacatggaagtgaatgctttatcagtcttttcatctg
aagctcatccaatgatggtgtaagtcctccgagggggcaaaaatgaaaac
aagaagtggctcttaactagaggacaaaagttattgcatatcactggcat
ggcttctaccatcacagcacagatttacaagtggaaaatttaacccaccc
tattagaaaaactcaagaacttcaaaaactctgaccaacacttaacaaat
gagaggatcaggatgtggagaggatgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_84218241_84218487
seq2: B6Ng01-035I13.b_50_296

seq1  ACAAGTATAAACAAAGAATGAGAATGGCTAGGCAAAGCTGAGTGTGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTATAAACAAAGAATGAGAATGGCTAGGCAAAGCTGAGTGTGAGCA  50

seq1  GGTAGAAAAGAGAAAGGACCAAGGGGCCTCTCTTCCCAATGATGGCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAAAGAGAAAGGACCAAGGGGCCTCTCTTCCCAATGATGGCCAAC  100

seq1  TAGGCCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTCTGGGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTCTGGGGGTA  150

seq1  CTGGTTACAGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTACAGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAG  200

seq1  GGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAGAAGGGCAGGGTGGAG  247
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAGAAGGGCAGGGTGGAG  247

seq1: chr8_84328089_84329031
seq2: B6Ng01-035I13.g_68_996 (reverse)

seq1  ACCCATCCATCATCCAACATCCTGGATCCTCTCATTTGTGTTTATGTGTT  50
      |||||||| || ||| ||||||| ||||||||||||||   ||| ||| |
seq2  ACCCATCC-TC-TCC-ACATCCT-GATCCTCTCATTTG---TTAAGTG-T  42

seq1  TGGTCAGATGTTTTTGGAAGTTCTTTGAAGCTTCTTTCATATAAGGGTGG  100
      |||||||| |||||| |||||||||    |  | |||| ||  ||||| |
seq2  TGGTCAGA-GTTTTT-GAAGTTCTT----GAGTTTTTC-TAATAGGGT-G  84

seq1  GGTCTAATTTTCCACTTTGTAAATCTGTGCTGTGATGGGTAGAAAGCCAT  150
      |||  |||||||||| |||||||||||||||||||| ||||| |||||||
seq2  GGTTAAATTTTCCAC-TTGTAAATCTGTGCTGTGAT-GGTAG-AAGCCAT  131

seq1  GGCAGTGATATGCAATAGCTTCTGATCCTCTAGTTTAAGAGCCAC-TCTT  199
      | ||||||||||||||| ||| || |||||||| ||||||||||| ||||
seq2  GCCAGTGATATGCAATAACTTTTG-TCCTCTAG-TTAAGAGCCACTTCTT  179

seq1  GGTTTCATCTTTGCCCCCTCAGAAGACTTACAGCATCATTGGATGAGC-T  248
      | |||||| ||||||||||| || |||||||| ||||||||||||||| |
seq2  GTTTTCATTTTTGCCCCCTCGGAGGACTTACACCATCATTGGATGAGCTT  229

seq1  CAGATG-AAAGACTGATAAAGCAGTCAGCTCCAATGTCACAG-TTATGGC  296
      |||||| |||||||||||||||| ||| || | ||||||||| |||||||
seq2  CAGATGAAAAGACTGATAAAGCATTCA-CTTCCATGTCACAGTTTATGGC  278

seq1  -AACCATCTTGGTTGAGGATCTGAGCACATGAGTGAGTTATCCTAGGGCA  345
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCTTGGTTGAGGATCTGAGCACATGAGTGAGTTATCCTAGGGCA  328

seq1  TCAGGTTCCAGTCTAGTCAGCAGCTTGTCC--AAACCCATG-AATGCAAA  392
      ||||||||||||||||||||||||||||||  || |||||| ||||||||
seq2  TCAGGTTCCAGTCTAGTCAGCAGCTTGTCCCAAACCCCATGAAATGCAAA  378

seq1  TATAACTGCTCACTCAGCCAGTTCACAGCAACCTGAGAAGCAACAGAACA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGCTCACTCAGCCAGTTCACAGCAACCTGAGAAGCAACAGAACA  428

seq1  TCCTTAAGCCTGTAGGCAACCGGGGAAAGTGAGATAGCTCAGTAGGTAAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAGCCTGTAGGCAACCGGGGAAAGTGAGATAGCTCAGTAGGTAAT  478

seq1  GCACTGGTATACAACCCAGATGACCCACGATCTATCCCTGGGACCTGCAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGTATACAACCCAGATGACCCACGATCTATCCCTGGGACCTGCAT  528

seq1  GTCATAAGAAGAAAACCAATGCCTATGGTTTGTCCTCTGTCCTCCACATG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAAGAAGAAAACCAATGCCTATGGTTTGTCCTCTGTCCTCCACATG  578

seq1  CACGGCATGGTATGCACATGCCCACACACATACAAATAAGTAACTAAACA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCATGGTATGCACATGCCCACACACATACAAATAAGTAACTAAACA  628

seq1  AATAAACAAATGTTTTAAAGAGCTTATAAATGGATAACTGGCCTGTAAAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACAAATGTTTTAAAGAGCTTATAAATGGATAACTGGCCTGTAAAC  678

seq1  CATATTTCACGTATAGTTTAACCAGAATCCATAAACATTAGTATGGTCTG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTCACGTATAGTTTAACCAGAATCCATAAACATTAGTATGGTCTG  728

seq1  AAGTGGATTTCCATTATGCCACATAGAAAGCAACACAATAACACATAAAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGATTTCCATTATGCCACATAGAAAGCAACACAATAACACATAAAA  778

seq1  TAAGCCTATAAGCCTAGATCATTTTAATGAAGCCTCTCATTTCAGTTTCC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTATAAGCCTAGATCATTTTAATGAAGCCTCTCATTTCAGTTTCC  828

seq1  TAATTTGGAAATATAGGTAAATATGTAAACACAATTTAAGATTTTCTTTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGGAAATATAGGTAAATATGTAAACACAATTTAAGATTTTCTTTT  878

seq1  GATTGTTGTTCTATCTTCCATAATTCCAAATCTTCTTGTTCAGATGAATT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTGTTCTATCTTCCATAATTCCAAATCTTCTTGTTCAGATGAATT  928

seq1  C  943
      |
seq2  C  929