BAC Information

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BAC

Clone NameB6Ng01-035K16
Chromosome8 (Build37)
Map Location 85,456,806 - 85,592,308
singlet/doubletdoublet
Overlap geneRnf150
Upstream geneInpp4b, LOC671182, Il15, EG666564, LOC675800, EG666289, Zfp330
Downstream geneLOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97, EG384857, Lphn1, Asf1b, Prkaca, Samd1, 1700067K01Rik, 2210011C24Rik, 4432412L15Rik, Il27ra, Rln3, C330011M18Rik, Rfx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035K16.bB6Ng01-035K16.g
ACCDH864073DH864074
length9451,037
definitionDH864073|Mus musculus domesticus DNA, BAC clone: B6Ng01-035K16, 5' end.DH864074|Mus musculus domesticus DNA, BAC clone: B6Ng01-035K16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,591,336 - 85,592,308)(85,456,806 - 85,457,680)
sequence
gaattcctgttgcagggttctgagtatccacaaaatgagccctagtgagt
gagactttcctagtgttcagacagtcaggtttcatgcagagtttctgctt
gggctgaacttggtgaggttggattccctgatgcttgtatattgatttag
atcacataggcaggccttcgccttgccgtgagccctcccacactggtttt
cattctctgtgacactgagcagcaggagaaagaattcctccttttggcaa
cttaatcatggcgtttttaccatgcaacagaaggacaggtataattatag
tttcttcggttctcattagtctttgacagagcacagagtgaaatttaccg
aacgtttctgttgtcagtagctacttcacaatccccagctagttttcaac
cacagagggacaacttaagcattaaataccaagcatttgctggtggacgt
ttctcaggacatgtgagcttgattggaacacaaagagcatgggaaagtta
aagctgtcagaggcggcagcctcatgggcagaattgtgtgggtttatttc
acaactatataataatggctatagatcgcatttgttcagcgattaaaata
cttaattgcccactcattcaacagacatttgttggatgtcactaggcata
caacacttaaggtaaatgttgtggaggatataaatttggccctgcctcta
acttaaatttgacccagtagaagaataaataaatattataataaatggta
tattgatatataatatataatatatgcatatacacatatagatatgtaca
tttacacagagatgcacgttaaagatagtataactaagattaaagagtaa
ttgggagggtacttttcatcttcacagatacagagactgactcatgagta
gatgctctgcactgtgtagatctagagtctgggagtatgggacaa
gaattcagggctgacctctggggattagataacccattagggagctcgtc
atctctggagaaaattgattctccctcatcctgcactcattgatcaccta
tagctcttcatctggagcggtggaacttgtgaaatgtctcccgtctacac
tggcatatcaactcgtgctgtcattatgcgggtcatttttttaggccttt
atattgttaagatctcatctgtgcaactgctctctcgtgttgagaagcca
ctctcccagcaggctgctagctccttcggttcttacaatctttccacccc
atttttatgtgtttcccccggaaccttgggtgtaggcattacatcacgga
tgtatcagttggagctgggatctcaggctcatttcttctctgtattttga
caagttctccatctgctgcaaaaagaacctttgttgatgagggatgaaag
ctacaaccatctatgggtataagaaataagtatttaaaatgatattagaa
gttaaattgatacaagaaaataaagtatatgcctctccagcaatgagaac
ttgattagggctttggtgctggacattaatttcctcctactgagacagct
ttaagtccaactggttacccgaaaataaaagtgccactaatgcaccctac
tttgccaggctgctcattttgttttataggtttaacagccacaaccaaag
caaccagtttcccaggattactgatggctgagtgggtcactgacccattt
ttaatctagaaaatccagttgtttaatggtactcatatctcctgtgttat
gaaagagagacaaagaggtatcttccagagaatggagatgcaaagtaaaa
taatactggggactcaggctacactccatctctgatccctaaatgatcat
ctctgcttctcatgcacagtgatagtggtttgggtatctgcagacaggag
gctcaacactactaacataattactagtctgagaattggtgctcactagt
atcccaggatttccgagaagtttctctactatgacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85591336_85592308
seq2: B6Ng01-035K16.b_46_990 (reverse)

seq1  TTGTCCCCATACTTCCCAGGACTTCTTAGATCCTTACCACAGGTGCAGAG  50
      |||| ||||||| ||||| ||||   ||||||  || |||| ||||||||
seq2  TTGT-CCCATAC-TCCCA-GACT--CTAGATC--TA-CACA-GTGCAGAG  41

seq1  CCAATCTACTCCATGAGTCAGTCCTCTTGGTTATCTGGTTGAAGATGAAA  100
      |  ||||||| ||||||||||| ||||    ||||||  |||||||||||
seq2  C--ATCTACT-CATGAGTCAGT-CTCT---GTATCTG--TGAAGATGAAA  82

seq1  AGTTACCCTCCCAATTACTTCTTTAATCTTTAGTTATACCTATCCTTTAA  150
      || ||||||||||||||| ||||||||| ||||||||| |||| ||||||
seq2  AG-TACCCTCCCAATTAC-TCTTTAATC-TTAGTTATA-CTAT-CTTTAA  127

seq1  CGTGCATTCTCTTGTGTTAAATGTACATATCTATATGTGTATATGCATAT  200
      |||||| |||| |||| |||||||||||||||||||||||||||||||||
seq2  CGTGCA-TCTC-TGTG-TAAATGTACATATCTATATGTGTATATGCATAT  174

seq1  ATTATTATATTATATATCAATATACCATTTATTATAATATTTATTTATTT  250
      |||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTA-TATATTATATATCAATATACCATTTATTATAATATTTATTTA-TT  222

seq1  CTTCTACTGGGTCAAATTTAAGTTAGAGGCAGGGCCAAATTTATATCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACTGGGTCAAATTTAAGTTAGAGGCAGGGCCAAATTTATATCCTC  272

seq1  CACAACATTTACCTTAAGTGTTGTATGCCTAGTGACATCCAACAAATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACATTTACCTTAAGTGTTGTATGCCTAGTGACATCCAACAAATGTC  322

seq1  TGTTGAATGAGTGGGCAATTAAGTATTTTAATCGCTGAACAAATGCGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAATGAGTGGGCAATTAAGTATTTTAATCGCTGAACAAATGCGATC  372

seq1  TATAGCCATTATTATATAGTTGTGAAATAAACCCACACAATTCTGCCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCATTATTATATAGTTGTGAAATAAACCCACACAATTCTGCCCAT  422

seq1  GAGGCTGCCGCCTCTGACAGCTTTAACTTTCCCATGCTCTTTGTGTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGCCGCCTCTGACAGCTTTAACTTTCCCATGCTCTTTGTGTTCCA  472

seq1  ATCAAGCTCACATGTCCTGAGAAACGTCCACCAGCAAATGCTTGGTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCTCACATGTCCTGAGAAACGTCCACCAGCAAATGCTTGGTATTT  522

seq1  AATGCTTAAGTTGTCCCTCTGTGGTTGAAAACTAGCTGGGGATTGTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTAAGTTGTCCCTCTGTGGTTGAAAACTAGCTGGGGATTGTGAAG  572

seq1  TAGCTACTGACAACAGAAACGTTCGGTAAATTTCACTCTGTGCTCTGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACTGACAACAGAAACGTTCGGTAAATTTCACTCTGTGCTCTGTCA  622

seq1  AAGACTAATGAGAACCGAAGAAACTATAATTATACCTGTCCTTCTGTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAATGAGAACCGAAGAAACTATAATTATACCTGTCCTTCTGTTGC  672

seq1  ATGGTAAAAACGCCATGATTAAGTTGCCAAAAGGAGGAATTCTTTCTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAAAAACGCCATGATTAAGTTGCCAAAAGGAGGAATTCTTTCTCCT  722

seq1  GCTGCTCAGTGTCACAGAGAATGAAAACCAGTGTGGGAGGGCTCACGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCAGTGTCACAGAGAATGAAAACCAGTGTGGGAGGGCTCACGGCA  772

seq1  AGGCGAAGGCCTGCCTATGTGATCTAAATCAATATACAAGCATCAGGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGAAGGCCTGCCTATGTGATCTAAATCAATATACAAGCATCAGGGAA  822

seq1  TCCAACCTCACCAAGTTCAGCCCAAGCAGAAACTCTGCATGAAACCTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCTCACCAAGTTCAGCCCAAGCAGAAACTCTGCATGAAACCTGAC  872

seq1  TGTCTGAACACTAGGAAAGTCTCACTCACTAGGGCTCATTTTGTGGATAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAACACTAGGAAAGTCTCACTCACTAGGGCTCATTTTGTGGATAC  922

seq1  TCAGAACCCTGCAACAGGAATTC  973
      |||||||||||||||||||||||
seq2  TCAGAACCCTGCAACAGGAATTC  945

seq1: chr8_85456806_85457680
seq2: B6Ng01-035K16.g_259_1103

seq1  AGGCCTTTATATTGTTAAGATCTCATCTGTGCAACTGCTCTCTCGTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTTATATTGTTAAGATCTCATCTGTGCAACTGCTCTCTCGTGTTG  50

seq1  AGAAGCCACTCTCCCAGCAGGCTGCTAGCTCCTTCGGTTCTTACAATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCACTCTCCCAGCAGGCTGCTAGCTCCTTCGGTTCTTACAATCTT  100

seq1  TCCACCCCATTTTTATGTGTTTCCCCCGGAACCTTGGGTGTAGGCATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCCATTTTTATGTGTTTCCCCCGGAACCTTGGGTGTAGGCATTAC  150

seq1  ATCACGGATGTATCAGTTGGAGCTGGGATCTCAGGCTCATTTCTTCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACGGATGTATCAGTTGGAGCTGGGATCTCAGGCTCATTTCTTCTCTG  200

seq1  TATTTTGACAAGTTCTCCATCTGCTGCAAAAAGAACCTTTGTTGATGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGACAAGTTCTCCATCTGCTGCAAAAAGAACCTTTGTTGATGAGG  250

seq1  GATGAAAGCTACAACCATCTATGGGTATAAGAAATAAGTATTTAAAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAGCTACAACCATCTATGGGTATAAGAAATAAGTATTTAAAATGA  300

seq1  TATTAGAAGTTAAATTGATACAAGAAAATAAAGTATATGCCTCTCCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGAAGTTAAATTGATACAAGAAAATAAAGTATATGCCTCTCCAGCA  350

seq1  ATGAGAACTTGATTAGGGCTTTGGTGCTGGACATTAATTTCCTCCTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAACTTGATTAGGGCTTTGGTGCTGGACATTAATTTCCTCCTACTG  400

seq1  AGACAGCTTTAAGTCCAACTGGTTACCCGAAAATAAAAGTGCCACTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTTTAAGTCCAACTGGTTACCCGAAAATAAAAGTGCCACTAATG  450

seq1  CACCCTACTTTGCCAGGCTGCTCATTTTGTTTTATAGGTTTAACAGCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTACTTTGCCAGGCTGCTCATTTTGTTTTATAGGTTTAACAGCCAC  500

seq1  AACCAAAGCAAACCAGTTTCCCAGGATTACTGATGGCTGAGTGGGTCACT  550
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAGC-AACCAGTTTCCCAGGATTACTGATGGCTGAGTGGGTCACT  549

seq1  GACCCCATTTTTTAATCTAGAAAATCCAGTTGTTTAATTGGTACTCATAT  600
      |||||   ||||||||||||||||||||||||||||| ||||||||||||
seq2  GACCC--ATTTTTAATCTAGAAAATCCAGTTGTTTAA-TGGTACTCATAT  596

seq1  CTCCTGTGTTATGAAAGAGAGACAAAGAGGTTATCTTCCAAGAGAATGGA  650
      |||||||||||||||||||||||||||||| |||||||| ||||||||||
seq2  CTCCTGTGTTATGAAAGAGAGACAAAGAGG-TATCTTCC-AGAGAATGGA  644

seq1  GATGCAAAAGTAAAAATAATACTGGGGACTCAGGGCTACAACTCCCATCT  700
      ||||| ||||| |||||||||||||||||||| |||||| ||| ||||||
seq2  GATGC-AAAGT-AAAATAATACTGGGGACTCA-GGCTAC-ACT-CCATCT  689

seq1  CTGATCCCTAAATGAATCATCTCTGCCTCCTCATGGCACAGTGATAGTGT  750
      |||||||||||||| |||||||||| || ||||| |||||||||||||| 
seq2  CTGATCCCTAAATG-ATCATCTCTG-CTTCTCAT-GCACAGTGATAGTGG  736

seq1  TATGGGTATCTGCAAGGAACAGGAAGGCTCAACACTACTAACATTAATTA  800
      | ||||||||||||    ||||| ||||||||||||||||||| ||||||
seq2  TTTGGGTATCTGCA---GACAGG-AGGCTCAACACTACTAACA-TAATTA  781

seq1  CTTAGGTTCTTTAGATATTGTGTCTCACTTAGTATTCACAGTATCTTCCC  850
      | |||  || | ||| ||||   ||||| ||||| || ||| |  || ||
seq2  C-TAG--TC-TGAGA-ATTGGTGCTCAC-TAGTA-TCCCAGGA--TTTCC  822

seq1  CAGAATGTTTCATCTACTATGACAA  875
       |||| ||||| |||||||||||||
seq2  GAGAA-GTTTC-TCTACTATGACAA  845