BAC Information

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BAC

Clone NameB6Ng01-036D05
Chromosome8 (Build37)
Map Location 13,785,605 - 13,786,345
singlet/doubletsinglet
Overlap geneUpf3a
Upstream geneAtp11a, LOC100040229, Mcf2l, F7, F10, Proz, Pcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2, Tmco3, Tfdp1, Atp4b, Grk1, Gm687, Gas6, LOC434282, 1700029H14Rik, Rasa3, 4932443I19Rik, LOC665516, Cdc16
Downstream geneAF366264, D8Ertd457e, 2410022L05Rik, EG665536, Fbxo25, LOC100041103, 2610019F03Rik, EG546036, Erich1, Dlgap2, LOC100041140, C030037F17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036D05.bB6Ng01-036D05.g
ACCDH864453DH864454
length74172
definitionDH864453|Mus musculus domesticus DNA, BAC clone: B6Ng01-036D05, 5' end.DH864454|Mus musculus domesticus DNA, BAC clone: B6Ng01-036D05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagggaggggctgcctagtcctcgcgaggcttcgttctcgcgg
aggtggcggcggccggccggccggtggggatgcgctcggaagagggggcc
ggaggcttaggcgcagccctggctgcgcggggcccgagctggagggagaa
actatcgagctcagagacccactgccgccgcgagtcaccgcggaaggagt
cggcggcgcctccggccccgaccctaagtgagagcggggccggcaagcct
cgcgaggagaagaggacagccctgagcaaggtgggggcggggcccgcaag
tctcgcgagaggacggcttctaagccccccggtgggcggggcttggggag
ggcggggcgggttgttcatctcaggggcggagcctagtctccgaagtgat
gcgggctgttgcgagcagtctggactaggattagcgagtcggggtggagc
tggggagccgcggtcccccgagctccggggaacctcaggctgagtgggcg
tggcgggcggcagcacctgagtgaacgcaatggtcatcccaggtggtcct
ccggcgtctgcccccgggcctcaccaaagagcagctggaagagcaactgc
gccccctgccggcgcacgattacttcgaggtggtggctgcggacctcagg
tgagggctgctgcgggacatcacttggtgaaggatggaggaccccgcggg
tgctcgcatttgcagtcccctctcagctgtcagtgcacgcc
tagggttttttcagagggtataaatgctagggccccaagaagccttgggg
gtggagggattgggttgggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_13785605_13786345
seq2: B6Ng01-036D05.b_44_784

seq1  GAATTCCAAGGGAGGGGCTGCCTAGTCCTCGCGAGGCTTCGTTCTCGCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGGAGGGGCTGCCTAGTCCTCGCGAGGCTTCGTTCTCGCGG  50

seq1  AGGTGGCGGCGGCCGGCCGGCCGGTGGGGATGCGCTCGGAAGAGGGGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCGGCGGCCGGCCGGCCGGTGGGGATGCGCTCGGAAGAGGGGGCC  100

seq1  GGAGGCTTAGGCGCAGCCCTGGCTGCGCGGGGCCCGAGCTGGAGGGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTTAGGCGCAGCCCTGGCTGCGCGGGGCCCGAGCTGGAGGGAGAA  150

seq1  ACTATCGAGCTCAGAGACCCACTGCCGCCGCGAGTCACCGCGGAAGGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCGAGCTCAGAGACCCACTGCCGCCGCGAGTCACCGCGGAAGGAGT  200

seq1  CGGCGGCGCCTCCGGCCCCGACCCTAAGTGAGAGCGGGGCCGGCAAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCGGCGCCTCCGGCCCCGACCCTAAGTGAGAGCGGGGCCGGCAAGCCT  250

seq1  CGCGAGGAGAAGAGGACAGCCCTGAGCAAGGTGGGGGCGGGGCCCGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGAGGAGAAGAGGACAGCCCTGAGCAAGGTGGGGGCGGGGCCCGCAAG  300

seq1  TCTCGCGAGAGGACGGCTTCTAAGCCCCCCGGTGGGCGGGGCTTGGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGCGAGAGGACGGCTTCTAAGCCCCCCGGTGGGCGGGGCTTGGGGAG  350

seq1  GGCGGGGCGGGTTGTTCATCTCAGGGGCGGAGCCTAGTCTCCGAAGTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGCGGGTTGTTCATCTCAGGGGCGGAGCCTAGTCTCCGAAGTGAT  400

seq1  GCGGGCTGTTGCGAGCAGTCTGGACTAGGATTAGCGAGTCGGGGTGGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGCTGTTGCGAGCAGTCTGGACTAGGATTAGCGAGTCGGGGTGGAGC  450

seq1  TGGGGAGCCGCGGTCCCCCGAGCTCCGGGGAACCTCAGGCTGAGTGGGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGCCGCGGTCCCCCGAGCTCCGGGGAACCTCAGGCTGAGTGGGCG  500

seq1  TGGCGGGCGGCAGCACCTGAGTGAACGCAATGGTCATCCCAGGTGGTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGGCGGCAGCACCTGAGTGAACGCAATGGTCATCCCAGGTGGTCCT  550

seq1  CCGGCGTCTGCCCCCGGGCCTCACCAAAGAGCAGCTGGAAGAGCAACTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCGTCTGCCCCCGGGCCTCACCAAAGAGCAGCTGGAAGAGCAACTGC  600

seq1  GCCCCCTGCCGGCGCACGATTACTTCGAGGTGGTGGCTGCGGACCTCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCTGCCGGCGCACGATTACTTCGAGGTGGTGGCTGCGGACCTCAGG  650

seq1  TGAGGGCTGCTGCGGGACACCCACTGGTGAAGGATGGAGGACCCCGCGGG  700
      ||||||||||||||||||| |   ||||||||||||||||||||||||||
seq2  TGAGGGCTGCTGCGGGACATCACTTGGTGAAGGATGGAGGACCCCGCGGG  700

seq1  CGCTCGCAGTTGCAGTCCCCTCCCAGCTGTCAGTGCACGCC  741
       ||||||| ||||||||||||| ||||||||||||||||||
seq2  TGCTCGCATTTGCAGTCCCCTCTCAGCTGTCAGTGCACGCC  741