BAC Information

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BAC

Clone NameB6Ng01-037I14
Chromosome8 (Build37)
Map Location 97,630,676 - 97,745,071
singlet/doubletdoublet
Overlap geneKifc3
Upstream geneMt4, Mt3, Mt2, Mt1, Nup93, LOC100041555, Slc12a3, Herpud1, EG434339, AI451557, Cpne2, 2310065K24Rik, Rspry1, Arl2bp, Pllp, Ccl22, Cx3cl1, 1700121C10Rik, Ccl17, Ciapin1, LOC664947, Coq9, Polr2c, Dok4, LOC100040942, Ccdc102a, Gpr114, Gpr56, Gpr97, Gm770, Katnb1
Downstream geneBC016201, Map1lc3-ps6, 1700055M20Rik, Zfp319, AA960436, Mmp15, Gtl3, Csnk2a2, 4933406B17Rik, Ccdc113, 4931432M23Rik, EG546088, LOC100041040, Gins3, LOC547022, Ndrg4, Setd6, Cnot1, LOC100041953, LOC100041088, BC031853, LOC100041972, Got2, LOC667445
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037I14.bB6Ng01-037I14.g
ACCDH865371DH865372
length637856
definitionDH865371|Mus musculus domesticus DNA, BAC clone: B6Ng01-037I14, 5' end.DH865372|Mus musculus domesticus DNA, BAC clone: B6Ng01-037I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,744,436 - 97,745,071)(97,630,676 - 97,631,530)
sequence
gaattctggaaaagaaaatgcattatctcactaaagggctaatatttcct
tctatctcttcagcctggcttaaggtgaatcaccttggccaagtgattga
tttacctgaccggattaactccttgttttctgccttagctgatctagagc
tagcctttgcctcccagtagagtgtgaaaacaggattcctgtgagattac
agctgggcttgctcagccctcagtggtcatcccccctgtggaatgtcgga
tagtctgccttgccccaggcaaacagtctcaggacggagagactgcaagg
gagacaaacacccacctatggctgcatccaagccctcacacccaagctcc
tcaccccagccctatgaagagtcacagccagctttttcccctcgcagaga
gaggttgcccttctgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgcgcgc
gaataaacatactcctcttttgaagtcagactctggctggtttctgccct
ctgcttctttacactgactgcatcagagctccaaggcctcccaagggctg
agagccaaggcacttaccaccatgctcagctgggttgactctcgggagtg
gacaatgggcatgtgtccactgtagctaggttcccct
gaattcacttactacattttcttcctgagcaaagtcaggatgctttgcct
tgtggctacacagtacagtcaatcctggtaacactctctgtggacttgag
tttcctcatctattcaagaagtttggactccatgaaccaagggatttatt
cttgccattaatctaaggagcatgggcaatgctaagcaggacttgggtac
cagatgggcaaaaaggacagctatccgtgtgctcccagccctggtgatgg
gacagtactggggttctctggatgactgatgatcactgtcccttctctca
gacaccatgaacatggtgatggctgtggtctggggatacagtgaattccc
cagtgtctgcaacagtagctgacacacagcaggtgctccctagggctcag
ggcagagatcagtgacacctgagcctgtagcaagtgccaccattgcacag
taccctaccacatcccccaggcctgggcagaacctaccatggccaaggag
ctttgaagatggtcaagttcaaatccaagctggaccatatactaggagtg
tgtcttttaagcaagtttcctgctttttctgtgcctcggaagcagcagca
gcagcagcagcagtgagcacagctttgatgcacagttgcagacactcacc
cttcagccggaccaactcgttatggcatttcttgcgcagctgtagttccc
ggcggtacttgcgcaacatctcctggttgttgctattaacttctcgatgg
cctggcccgatctgcgaagacacgtggtgccattcagagccggactctgt
ccgcttcccttcactgggccagatggtgggtattccctcaccagcccggg
gctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_97744436_97745071
seq2: B6Ng01-037I14.b_47_683 (reverse)

seq1  AGGGGAACCTAGCTACAGTGGACACATG-CCATTGTCCACTCCCGAGAGT  49
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGGGGAACCTAGCTACAGTGGACACATGCCCATTGTCCACTCCCGAGAGT  50

seq1  CAACCCAGCTGAGCATGGTGGTAAGTGCCTTGGCTCTCAGCCCTTGGGAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCAGCTGAGCATGGTGGTAAGTGCCTTGGCTCTCAGCCCTTGGGAG  100

seq1  GCCTTGGAGCTCTGATGCAGTCAGTGTAAAGAAGCAGAGGGCAGAAACCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGAGCTCTGATGCAGTCAGTGTAAAGAAGCAGAGGGCAGAAACCA  150

seq1  GCCAGAGTCTGACTTCAAAAGAGGAGTATGTTTATTCGCGCGCACATACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGTCTGACTTCAAAAGAGGAGTATGTTTATTCGCGCGCACATACA  200

seq1  CACACACACACACACACACACACAGAAGGGCAACCTCTCTCTGCGAGGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACAGAAGGGCAACCTCTCTCTGCGAGGGG  250

seq1  AAAAAGCTGGCTGTGACTCTTCATAGGGCTGGGGTGAGGAGCTTGGGTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCTGGCTGTGACTCTTCATAGGGCTGGGGTGAGGAGCTTGGGTGT  300

seq1  GAGGGCTTGGATGCAGCCATAGGTGGGTGTTTGTCTCCCTTGCAGTCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTTGGATGCAGCCATAGGTGGGTGTTTGTCTCCCTTGCAGTCTCT  350

seq1  CCGTCCTGAGACTGTTTGCCTGGGGCAAGGCAGACTATCCGACATTCCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCCTGAGACTGTTTGCCTGGGGCAAGGCAGACTATCCGACATTCCAC  400

seq1  AGGGGGGATGACCACTGAGGGCTGAGCAAGCCCAGCTGTAATCTCACAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGGATGACCACTGAGGGCTGAGCAAGCCCAGCTGTAATCTCACAGG  450

seq1  AATCCTGTTTTCACACTCTACTGGGAGGCAAAGGCTAGCTCTAGATCAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGTTTTCACACTCTACTGGGAGGCAAAGGCTAGCTCTAGATCAGC  500

seq1  TAAGGCAGAAAACAAGGAGTTAATCCGGTCAGGTAAATCAATCACTTGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAGAAAACAAGGAGTTAATCCGGTCAGGTAAATCAATCACTTGGC  550

seq1  CAAGGTGATTCACCTTAAGCCAGGCTGAAGAGATAGAAGGAAATATTAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGATTCACCTTAAGCCAGGCTGAAGAGATAGAAGGAAATATTAGC  600

seq1  CCTTTAGTGAGATAATGCATTTTCTTTTCCAGAATTC  636
      |||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGTGAGATAATGCATTTTCTTTTCCAGAATTC  637

seq1: chr8_97630676_97631530
seq2: B6Ng01-037I14.g_70_925

seq1  GAATTCACTTACTACATTTTCTTCCTGAGCAAAGTCAGGATGCTTTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTACTACATTTTCTTCCTGAGCAAAGTCAGGATGCTTTGCCT  50

seq1  TGTGGCTACACAGTACAGTCAATCCTGGTAACACTCTCTGTGGACTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTACACAGTACAGTCAATCCTGGTAACACTCTCTGTGGACTTGAG  100

seq1  TTTCCTCATCTATTCAAGAAGTTTGGACTCCATGAACCAAGGGATTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCATCTATTCAAGAAGTTTGGACTCCATGAACCAAGGGATTTATT  150

seq1  CTTGCCATTAATCTAAGGAGCATGGGCAATGCTAAGCAGGACTTGGGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCATTAATCTAAGGAGCATGGGCAATGCTAAGCAGGACTTGGGTAC  200

seq1  CAGATGGGCAAAAAGGACAGCTATCCGTGTGCTCCCAGCCCTGGTGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGGCAAAAAGGACAGCTATCCGTGTGCTCCCAGCCCTGGTGATGG  250

seq1  GACAGTACTGGGGTTCTCTGGATGACTGATGATCACTGTCCCTTCTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTACTGGGGTTCTCTGGATGACTGATGATCACTGTCCCTTCTCTCA  300

seq1  GACACCATGAACATGGTGATGGCTGTGGTCTGGGGATACAGTGAATTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCATGAACATGGTGATGGCTGTGGTCTGGGGATACAGTGAATTCCC  350

seq1  CAGTGTCTGCAACAGTAGCTGACACACAGCAGGTGCTCCCTAGGGCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTGCAACAGTAGCTGACACACAGCAGGTGCTCCCTAGGGCTCAG  400

seq1  GGCAGAGATCAGTGACACCTGAGCCTGTAGCAAGTGCCACCATTGCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGATCAGTGACACCTGAGCCTGTAGCAAGTGCCACCATTGCACAG  450

seq1  TACCCTACCACATCCCCCAGGCCTGGGCAGAACCTACCATGGCCAAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTACCACATCCCCCAGGCCTGGGCAGAACCTACCATGGCCAAGGAG  500

seq1  CTTTGAAGATGGTCAAGTTCAAATCCAAGCTGGACCATATACTAGGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGATGGTCAAGTTCAAATCCAAGCTGGACCATATACTAGGAGTG  550

seq1  TGTC-TTTAAGCAAGTTTCCTGCTTTTTCTGTGCCTCGGAAGCAGCAGCA  599
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTAAGCAAGTTTCCTGCTTTTTCTGTGCCTCGGAAGCAGCAGCA  600

seq1  GCAGCAGCAGCAGTGAGCACAGCTTTGATGCACAGTTGCAGACACTCACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCAGCAGTGAGCACAGCTTTGATGCACAGTTGCAGACACTCACC  650

seq1  CTTCAGCCGGACCAGCTCGTTATGGCATTTCTTGCGCAGCTGTAGTTCCC  699
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTTCAGCCGGACCAACTCGTTATGGCATTTCTTGCGCAGCTGTAGTTCCC  700

seq1  GGCGGTACTTGCGCAACAGCTCCTGGTTGTTGCTATTAACCTCCTCGATG  749
      |||||||||||||||||| |||||||||||||||||||| || |||||||
seq2  GGCGGTACTTGCGCAACATCTCCTGGTTGTTGCTATTAA-CTTCTCGATG  749

seq1  GCCTGG-CCGATCTGCGGAGCACACGTGGTGCCA-TCAGAAGCCGGACTC  797
      |||||| |||||||||| || ||||||||||||| |||| ||||||||||
seq2  GCCTGGCCCGATCTGCGAAG-ACACGTGGTGCCATTCAG-AGCCGGACTC  797

seq1  TGTCAGCTTCCCTTCACTGGGCCTGATGGT-GGTATTACCCTCACCAGCC  846
      |||| |||||||||||||||||| |||||| |||||| ||||||||||||
seq2  TGTCCGCTTCCCTTCACTGGGCCAGATGGTGGGTATT-CCCTCACCAGCC  846

seq1  C-GGGCTGAG  855
      | ||||||||
seq2  CGGGGCTGAG  856