BAC Information

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BAC

Clone NameB6Ng01-037O02
Chromosome8 (Build37)
Map Location 10,700,454 - 10,842,594
singlet/doubletdoublet
Overlap geneLOC100040008, LOC384782
Upstream geneTmem28, Lig4, Abhd13, Tnfsf13b, Myo16
Downstream geneLOC100040507, LOC665306, Irs2, Col4a1, Col4a2, Rab20, 0710008K08Rik, Cars2, Ing1, Ankrd10, 1700016D06Rik, EG665271, LOC665363, LOC624710, LOC665373, Arhgef7, 1700018L24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037O02.bB6Ng01-037O02.g
ACCDH865613DH865614
length1,0421,009
definitionDH865613|Mus musculus domesticus DNA, BAC clone: B6Ng01-037O02, 5' end.DH865614|Mus musculus domesticus DNA, BAC clone: B6Ng01-037O02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,841,561 - 10,842,594)(10,700,454 - 10,701,461)
sequence
gaattctcacatgtaagggctcagagaccagccatagatgaaaaggaagg
acaacctagtatattctagcttttccaggggcaggctccagggcacccac
tatgtcatagagtaccatatggcaggacatgacgcccagtgagtattgtc
ttaaataaatagccaagagtgattatgtccatgaatgaatacccggagta
acccaaataacccaactaaaaggctggtctctgtagagacagctctgtaa
gagtactcactgttcttgtcgaggacccaggtttgttgctagcaccaaca
tggtggctcacgattgtctgtaattccagattcaggggactgaacactct
cttttagcctctgatggtgctaagtacatgtgtggtgcacatacatagct
gattgcaaacacagatacaccacacacacacacacacacacacacacaca
gaagaagaagaagaagaagaagaagaagaagaagaaggagaagctttgac
caagttccatgttacaggtagagtttggaagataagagatgttttctcaa
gactagctgctgtcatcccttgccctaggagcccaccacactcctagaca
gggtaggatgcaaatgaggtgtatgtttttgttttctctttcctgtattt
tacaatacccaggtgttattatcgtgtgatttggccgcatgactctatga
gaagcatattcctgaatgcagatgcaaaaatcgtgactttcttttttttt
taaaatcggttctctaccattctacagctgtaaagacctactcagagaag
atggaggttggatctcccagctcccatggtctgtaatcatgctggcttat
gtgcgatggttttggacgttacataggaaagcacagggaactcatgagtt
aggctgtgatctgggagaatagaagacttgggtttacatattatgtatat
atatatatacacacattataatacattaatatttaatatattgaaatata
tgtattgctatatatatttgatatagatatctattacaatta
gaattcaggttatctaatcccgaggaagcattggggaaagaggctcagct
ctgggcacagacctgatgtttctgcaatgtatctttatttcatcctggga
atgactggtgattccagcaagttagagttcaggaaacgcaaggctgtggc
ctgtatgagaaacagagtggcccaggctaggtccagatcctggagacagc
tgattctgtattgtgtatggtagtgtgttaaattatcactctgaacttcc
agttcaccaagtcttcaggagacagaatgggtcgttctgtagacctggcc
ttgctgagaaccaatgaatattaggaaatgccaaggaagacagtcaaggc
aatcagggaatgtcttcggggtccactaacagtcacagctggtgtctgtt
gaggacaatcaggttatcacttcagtgcttctgaggggaagctcagggat
tctgctcgcattgaagtcactgaagccaaaacagaatgctgtctagggac
aggagactgggaaaggccagcagttcaccggcagttttcaaacacttcta
taatgttaatctttgtccacttgactgggttcgcaataacatagaaaaca
catctctgggagtatctgcaaggatattaggagaaaagcctaatcaagga
gggaagatgtatcttgaatggtggcaccattgtaagcttatgtcgggttg
agcaggaggcaggaaaagagcaacaggtctgagcaccggcttttgctttc
atctcttggttcctaactgcatgtgccaggtgaccagctgcctcatgacc
ttgtccccacacatttccctccatgatggatagaactctcaaacttgtga
gccaagatctaaattgttttaattaggtactttatcaacaactagaaaaa
gcaaccatccggtgtcctcctgtggtaagcaaccaatcagtatctcttgt
gtaagcaccaatcatattttcctgtgtaagcaatcatcagtaattatggt
cctcctccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_10841561_10842594
seq2: B6Ng01-037O02.b_45_1080 (reverse)

seq1  TAATAGATATTCTATTATCAAATAATATATAGCAATACATTATATTTCAA  50
      ||||||||| |||| |||||||| ||||||||||||||| ||||||||||
seq2  TAATAGATA-TCTA-TATCAAAT-ATATATAGCAATACA-TATATTTCAA  46

seq1  TATATTAAATATTAATGTATTATAATGTGTGTATATATATATATACAT-A  99
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATATTAAATATTAATGTATTATAATGTGTGTATATATATATATACATAA  96

seq1  TATGTAAACCCAAGTCTTCT-TTCTCCCAGATCACAG-CTAACTCATGAG  147
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  TATGTAAACCCAAGTCTTCTATTCTCCCAGATCACAGCCTAACTCATGAG  146

seq1  TTCCCTGTGCTTTCCTATGTACCGTCC-AAACCATCGCACATAAGCCAGC  196
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  TTCCCTGTGCTTTCCTATGTAACGTCCAAAACCATCGCACATAAGCCAGC  196

seq1  ATGATTACAGACCATGGGAGCTGGGAGATCCAACCTCCATCTTCTCTGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTACAGACCATGGGAGCTGGGAGATCCAACCTCCATCTTCTCTGAG  246

seq1  TAGGTCTTTACAGCTGTAGAATGGTAGAGAACCGATTTTAAAAAAAAAAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTTTACAGCTGTAGAATGGTAGAGAACCGATTTTAAAAAAAAAAG  296

seq1  AAAGTCACGATTTTTGCATCTGCATTCAGGAATATGCTTCTCATAGAGTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACGATTTTTGCATCTGCATTCAGGAATATGCTTCTCATAGAGTC  346

seq1  ATGCGGCC-AATCACACGATAATAACACCTGGGTATTGTAAAATACAGGA  395
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGGCCAAATCACACGATAATAACACCTGGGTATTGTAAAATACAGGA  396

seq1  AAGAGAAAAC-AAAACATACACCTCATTTGCATCCTACCCTGTCTAGGAG  444
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAACAAAAACATACACCTCATTTGCATCCTACCCTGTCTAGGAG  446

seq1  TGTGGTGGGCTCCTAGGGCAAGGGATGACAGCAGCTAGTCTTGAGAAAAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGGCTCCTAGGGCAAGGGATGACAGCAGCTAGTCTTGAGAAAAC  496

seq1  ATCTCTTATCTTCCAAACTCTACCTGTAACATGGAACTTGGTCAAAGCTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTATCTTCCAAACTCTACCTGTAACATGGAACTTGGTCAAAGCTT  546

seq1  CTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTGTGTGTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTGTGTGTG  596

seq1  TGTGTGTGTGTGTGTGTGTGGTGTATCTGTGTTTGCAATCAGCTATGTAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGGTGTATCTGTGTTTGCAATCAGCTATGTAT  646

seq1  GTGCACCACACATGTACTTAGCACCATCAGAGGCTAAAAGAGAGTGTTCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCACACATGTACTTAGCACCATCAGAGGCTAAAAGAGAGTGTTCA  696

seq1  GTCCCCTGAATCTGGAATTACAGACAATCGTGAGCCACCATGTTGGTGCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCTGAATCTGGAATTACAGACAATCGTGAGCCACCATGTTGGTGCT  746

seq1  AGCAACAAACCTGGGTCCTCGACAAGAACAGTGAGTACTCTTACAGAGCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAAACCTGGGTCCTCGACAAGAACAGTGAGTACTCTTACAGAGCT  796

seq1  GTCTCTACAGAGACCAGCCTTTTAGTTGGGTTATTTGGGTTACTCCGGGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTACAGAGACCAGCCTTTTAGTTGGGTTATTTGGGTTACTCCGGGT  846

seq1  ATTCATTCATGGACATAATCACTCTTGGCTATTTATTTAAGACAATACTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCATGGACATAATCACTCTTGGCTATTTATTTAAGACAATACTC  896

seq1  ACTGGGCGTCATGTCCTGCCATATGGTACTCTATGACATAGTGGGTGCCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCGTCATGTCCTGCCATATGGTACTCTATGACATAGTGGGTGCCC  946

seq1  TGGAGCCTGCCCCTGGAAAAGCTAGAATATACTAGGTTGTCCTTCCTTTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCTGCCCCTGGAAAAGCTAGAATATACTAGGTTGTCCTTCCTTTT  996

seq1  CATCTATGGCTGGTCTCTGAGCCCTTACATGTGAGAATTC  1034
      ||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATGGCTGGTCTCTGAGCCCTTACATGTGAGAATTC  1036

seq1: chr8_10700454_10701461
seq2: B6Ng01-037O02.g_70_1078

seq1  GAATTCAGGTTATCTAATCCCGAGGAAGCATTGGGGAAAGAGGCTCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTATCTAATCCCGAGGAAGCATTGGGGAAAGAGGCTCAGCT  50

seq1  CTGGGCACAGACCTGATGTTTCTGCAATGTATCTTTATTTCATCCTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCACAGACCTGATGTTTCTGCAATGTATCTTTATTTCATCCTGGGA  100

seq1  ATGACTGGTGATTCCAGCAAGTTAGAGTTCAGGAAACGCAAGGCTGTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGGTGATTCCAGCAAGTTAGAGTTCAGGAAACGCAAGGCTGTGGC  150

seq1  CTGTATGAGAAACAGAGTGGCCCAGGCTAGGTCCAGATCCTGGAGACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGAGAAACAGAGTGGCCCAGGCTAGGTCCAGATCCTGGAGACAGC  200

seq1  TGATTCTGTATTGTGTATGGTAGTGTGTTAAATTATCACTCTGAACTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTGTATTGTGTATGGTAGTGTGTTAAATTATCACTCTGAACTTCC  250

seq1  AGTTCACCAAGTCTTCAGGAGACAGAATGGGTCGTTCTGTAGACCTGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACCAAGTCTTCAGGAGACAGAATGGGTCGTTCTGTAGACCTGGCC  300

seq1  TTGCTGAGAACCAATGAATATTAGGAAATGCCAAGGAAGACAGTCAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAGAACCAATGAATATTAGGAAATGCCAAGGAAGACAGTCAAGGC  350

seq1  AATCAGGGAATGTCTTCGGGGTCCACTAACAGTCACAGCTGGTGTCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGGAATGTCTTCGGGGTCCACTAACAGTCACAGCTGGTGTCTGTT  400

seq1  GAGGACAATCAGGTTATCACTTCAGTGCTTCTGAGGGGAAGCTCAGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAATCAGGTTATCACTTCAGTGCTTCTGAGGGGAAGCTCAGGGAT  450

seq1  TCTGCTCGCATTGAAGTCACTGAAGCCAAAACAGAATGCTGTCTAGGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCGCATTGAAGTCACTGAAGCCAAAACAGAATGCTGTCTAGGGAC  500

seq1  AGGAGACTGGGAAAGGCCAGCAGTTCACCGGCAGTTTTCAAACACTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACTGGGAAAGGCCAGCAGTTCACCGGCAGTTTTCAAACACTTCTA  550

seq1  TAATGTTAATC-TTGTCCACTTGACTGGGTTCGCAATAACATAGAAAACA  599
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTAATCTTTGTCCACTTGACTGGGTTCGCAATAACATAGAAAACA  600

seq1  CATCTCTGGGAGTATCTGCAAGGATATTAGGAGAAAAGCCTAATCAAGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGGGAGTATCTGCAAGGATATTAGGAGAAAAGCCTAATCAAGGA  650

seq1  GGGAAGATGTATCTTGAATGGTGGCACCATTGTAAGCTTATGTCGGGTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGATGTATCTTGAATGGTGGCACCATTGTAAGCTTATGTCGGGTTG  700

seq1  AGCAGGAGGCAGGAAAAGAGCAACAGGTCTGAGCACCGGCTTTTGCTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGGCAGGAAAAGAGCAACAGGTCTGAGCACCGGCTTTTGCTTTC  750

seq1  ATCTCTTGGTTCCTAACTGCAGGTGCCAGGTGACCAGCTGCCTCATGACC  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATCTCTTGGTTCCTAACTGCATGTGCCAGGTGACCAGCTGCCTCATGACC  800

seq1  TTGCCCCCACACATTTCCCTCCATGATGGATAGAACTCTCAAAC-TGTGA  848
      ||| |||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGTCCCCACACATTTCCCTCCATGATGGATAGAACTCTCAAACTTGTGA  850

seq1  GCC-AGATCTAAATTGTTTAAATTAGGTACTTTATCAACAACTAG-AAAA  896
      ||| ||||||||||||||| ||||||||||||||||||||||||| ||||
seq2  GCCAAGATCTAAATTGTTTTAATTAGGTACTTTATCAACAACTAGAAAAA  900

seq1  GCAACCAATCGGTGTCCTCCTGT-GTAAGCAACCAATCAGTATCTTCCTG  945
      |||||||  |||||||||||||| |||||||||||||||||||| || ||
seq2  GCAACCATCCGGTGTCCTCCTGTGGTAAGCAACCAATCAGTATC-TCTTG  949

seq1  TGTAAGCAACCAATCAGTATCTTCCTGTGTAAGCAACCAATCAGTAATCA  995
      ||||||| |||||||| ||| ||||||||||||||| | ||||||||| |
seq2  TGTAAGC-ACCAATCA-TATTTTCCTGTGTAAGCAATC-ATCAGTAATTA  996

seq1  GTGTCCTCCTCCG  1008
        |||||||||||
seq2  TGGTCCTCCTCCG  1009