BAC Information

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BAC

Clone NameB6Ng01-039G10
Chromosome8 (Build37)
Map Location 44,339,499 - 44,340,586
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628212, Triml1, LOC622082, EG622117, LOC100039417
Downstream geneZfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039G10.bB6Ng01-039G10.g
ACCDH866681DH866682
length1,1331,077
definitionDH866681|Mus musculus domesticus DNA, BAC clone: B6Ng01-039G10, 5' end.DH866682|Mus musculus domesticus DNA, BAC clone: B6Ng01-039G10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaggcttttatcagaatgggtgttgggttttgt
gaaaagctttctcagaatctaaggacatgatcatgtgctttttgtctttg
agtttgtttatataatggattacgttgatcgatttccatatattaaacca
tccctgcatccctcaaatgaaacctacccgatcaggatggatgattgttt
tgatgtgttcttggattcggttagcaagaattttattgagtatttttgca
tcgatattcataagaaaaattggtctgaagttctttatctttgttgggtc
tttttgtggtttaggtatcagaataattgtggcttcatagattgattgac
taggggagcttctgcttctattttgtggaatagtttgtgaagaactggga
ttagatcttctttgaaggtctgatagaactctgcactaaacacatctggt
cctgggctttttttggttgggagactattaatgactgctatttctttagg
ggatgtaggactttttagatcattaacctgatcctgatttaactttggtg
cctggtatctgtctagaaatttgtccatttcatccagtttctccagattt
gttgagtatatccttttgtagaaggatctgatggtgttctggatttctac
aggatctggtgttatgtctcccatttcattcctgattttgttaattagga
cactgtccctgtgccctctggtgagtctggctaagggtttatctatcttg
ttgattttctcaaagaaccagcttcttgattggttgactcttttgaatag
ttcttgttttgacttggttgatttcgaccctgagtttgattatttcctgc
cgtctactcctcttgggtgatttgcttccttttgttctagagctttttag
tgtattgtcaagctgctaatgtgtgctctcttctagtttctttggaggca
ctcatagctatgagttttcctcttagaaatgctttcattgtgaactgttt
ggtaatgttgtgctccattatcataaacctctaaaagtctttattttctc
tcttattcctcctgaccaggattcgttgataaaaatgttgttcaattcac
ataaagtgtggtttctcattatttgtctgtaat
gaattccttggagggcacatctatagattactatgagacggtgtagacat
catttaaggccaacaccagaaaacaaggataaaatatcatgagattcgta
gaagctgtgctataaacggtacattagttacctaatgttctaagagaaat
tgcaccaaatttattggtctaaaataataataatacttgttagtatttca
tagctttgactggtcaggagttcagataggacatagcaaaggggatagct
tgtgtgtcccagatatgtcatctgcaaaactcaagatgggtattaaaatt
attagaagagaagacttaactgggagcagaaagtctcctgagtttccttg
tgctcatggcttcagcctggtaccagaaagtcaatttctttgtcacatag
aaaaccactccaggaggatgactggttgttcttatgacccagtcacccgt
tccctgacagcatctgagggtctagtggtcgctgccctttctagggtatg
tccttgagtcatgtgccccctgtctctataccttctttctgtccactaga
tgtgagtcagaagtgtcagaaaaatggaggggtggttctgatgctaaggt
gcagttctccaatttgttcttaatctatcagtaaagattccaggggccag
ttgctgggcagaaggaaagaggcgggacttccagggccctgcaggaggag
gcaaggagacacagggaaaggaagagaatgaggaagagtttttccgcctt
gcctcggagggagaaatggccaccagccatgtgagatctaggctggagta
gccattggtcacatccccatctgggcctggggtagcaactaaagctgagc
acagatctggggtgttgaactgggactaaatgtaactgagcaactaaagt
tgaaggcagatttacggtgctgagcaaagagtattgggaaagacatgcca
gcattgggagattagacacacccagcactgagccagatggcagttgaaaa
taagcgttttttttgtgtttgtgtggcctttctttcaggatctaagactg
atggggctgatgacatggtctacctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_44339499_44340586
seq2: B6Ng01-039G10.g_66_1142 (reverse)

seq1  CCAGGTAGACCATGCTATCAGCCCCACTCAGGTTCCCTTAGATCCCTGAA  50
      ||||||||||||||  |||||||||| ||||     ||||||| ||||||
seq2  CCAGGTAGACCATGTCATCAGCCCCA-TCAG----TCTTAGAT-CCTGAA  44

seq1  AGAAAGGCACACACACACACACACACACACGCTTATTTTCAACTTGCCAT  100
      |||||||| |||||| ||||| | | | ||||||||||||||| ||||||
seq2  AGAAAGGC-CACACAAACACA-AAAAAAACGCTTATTTTCAAC-TGCCAT  91

seq1  CTTGGCTCAGTTGCTGGGTGTGTCTAATCTCCCAATGCTGGCATGTCTTT  150
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  C-TGGCTCAG-TGCTGGGTGTGTCTAATCTCCCAATGCTGGCATGTCTTT  139

seq1  CCCAATACTCTTTGCTCAGCACCCTAAATCTGCCTTCAACTTTAGTTGCT  200
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCCAATACTCTTTGCTCAGCACCGTAAATCTGCCTTCAACTTTAGTTGCT  189

seq1  CAGTTACATTTAGTCCCAGTTCAACACCCCAGATCTGTGCTCAGCTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACATTTAGTCCCAGTTCAACACCCCAGATCTGTGCTCAGCTTTAG  239

seq1  TTGCTACCCCAGGCCCAGATGGGGATGTGACCAATGGCTACTCCAGCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTACCCCAGGCCCAGATGGGGATGTGACCAATGGCTACTCCAGCCTA  289

seq1  GATCTCACATGGCTGGTGGCCATTTCTCCCTCCGAGGCAAGGCGGAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCACATGGCTGGTGGCCATTTCTCCCTCCGAGGCAAGGCGGAAAAA  339

seq1  CTCTTCCTCATTCTCTTCCTTTCCCTGTGTCTCCTTGCCTCCTCCTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTCATTCTCTTCCTTTCCCTGTGTCTCCTTGCCTCCTCCTGCAG  389

seq1  GGCCCTGGAAGTCCCGCCTCTTTCCTTCTGCCCAGCAACTGGCCCCTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGAAGTCCCGCCTCTTTCCTTCTGCCCAGCAACTGGCCCCTGGA  439

seq1  ATCTTTACTGATAGATTAAGAACAAATTGGAGAACTGCACCTTAGCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTACTGATAGATTAAGAACAAATTGGAGAACTGCACCTTAGCATCA  489

seq1  GAACCACCCCTCCATTTTTCTGACACTTCTGACTCACATCTAGTGGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACCCCTCCATTTTTCTGACACTTCTGACTCACATCTAGTGGACAG  539

seq1  AAAGAAGGTATAGAGACAGGGGGCACATGACTCAAGGACATACCCTAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGGTATAGAGACAGGGGGCACATGACTCAAGGACATACCCTAGAA  589

seq1  AGGGCAGCGACCACTAGACCCTCAGATGCTGTCAGGGAACGGGTGACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGCGACCACTAGACCCTCAGATGCTGTCAGGGAACGGGTGACTGG  639

seq1  GTCATAAGAACAACCAGTCATCCTCCTGGAGTGGTTTTCTATGTGACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAAGAACAACCAGTCATCCTCCTGGAGTGGTTTTCTATGTGACAAA  689

seq1  GAAATTGACTTTCTGGTACCAGGCTGAAGCCATGAGCACAAGGAAACTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGACTTTCTGGTACCAGGCTGAAGCCATGAGCACAAGGAAACTCA  739

seq1  GGAGACTTTCTGCTCCCAGTTAAGTCTTCTCTTCTAATAATTTTAATACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTTTCTGCTCCCAGTTAAGTCTTCTCTTCTAATAATTTTAATACC  789

seq1  CATCTTGAGTTTTGCAGATGACATATCTGGGACACACAAGCTATCCCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGAGTTTTGCAGATGACATATCTGGGACACACAAGCTATCCCCTT  839

seq1  TGCTATGTCCTATCTGAACTCCTGACCAGTCAAAGCTATGAAATACTAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGTCCTATCTGAACTCCTGACCAGTCAAAGCTATGAAATACTAAC  889

seq1  AAGTATTATTATTATTTTAGACCAATAAATTTGGTGCAATTTCTCTTAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTATTATTATTTTAGACCAATAAATTTGGTGCAATTTCTCTTAGA  939

seq1  ACATTAGGTAACTAATGTACCGTTTATAGCACAGCTTCTACGAATCTCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGGTAACTAATGTACCGTTTATAGCACAGCTTCTACGAATCTCAT  989

seq1  GATATTTTATCCTTGTTTTCTGGTGTTGGCCTTAAATGATGTCTACACCG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTATCCTTGTTTTCTGGTGTTGGCCTTAAATGATGTCTACACCG  1039

seq1  TCTCATAGTAATCTATAGATGTGCCCTCCAAGGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAGTAATCTATAGATGTGCCCTCCAAGGAATTC  1077