BAC Information

Click to search

BAC

Clone NameB6Ng01-040M13
Chromosome8 (Build37)
Map Location 116,971,773 - 117,114,374
singlet/doubletdoublet
Overlap geneWwox
Upstream geneMon1b, 4930481F22Rik, Adamts18, Nudt7, AI427515, Clec3a
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040M13.bB6Ng01-040M13.g
ACCDH867645DH867646
length5181,099
definitionDH867645|Mus musculus domesticus DNA, BAC clone: B6Ng01-040M13, 5' end.DH867646|Mus musculus domesticus DNA, BAC clone: B6Ng01-040M13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,113,851 - 117,114,374)(116,971,773 - 116,972,881)
sequence
ataactagctgaggatgtgctcagccaggctgaggaaactgggaggagtg
agatgactttgaagatgaaactttagaaaggtgggaactcctgctcttgg
cctcttctccttcacagtggccacagggcacaaggcaggattacccatga
gccttctgctatgattagtaacatgatcaataccacttgctgggtgccat
ctctcttcccaagtgtgctgagtgctttgtccaagtgaatgccaattctc
ttgcccattccgttccattggacactgaggtggagcggggataacagaga
catccccaagtctaagaaccagaagacgatggctaactaacccggaggga
gccctctacctgtaccatctgtggctgcatgggtcaaagaggattcagat
tcagctgggagtgggtcaggggaaaaactataaggacaggtaggtgtggg
tggacctgtggttgacactgtaaggaaatcaggagctgctactaggaagg
gggtgtggtgtgtggtga
gaattcagtagaaacttagagccttctcagcaggctgctgtgggacccaa
gaggcctgctgtgtcccagtaccttcagggttgttctgagaggctccacg
gctcttttcaggcaagagtgccatccttccagaggccagaaggtagatgg
aatggcttctgggtctcttcgtgtttgacagtaaggctgtggtgcattgt
tcccctgaagtattagattttcttgtacttagagatgctggtccttgctg
tatagagttcaatgttctttcttcctgctctttgcagccacataaataaa
agaactacctacttggatccaagattggcatttaccgtggacgataatcc
gacgaagccgaccaccagacagagatacgacgggagcaccaccgccatgg
agatcctgcagggccgggacttcacaggcaaggtggtcctggttactgga
gcaaattcgggaataggtaggcctgcagcttactgtcctcttatttcatt
tatttaatttttgtgagtgctgcaaagaattctccttaaatgtaactgta
atgaaacgttggtggtgactctccaattgaaagaggctgttacagctctc
tcagctgttgtctcattaaaaccgcactccctctccatcccagtgttaca
gtgtgaggtttgtggggcctgaccttgaagttgctcaaagctgagaagtc
agcagaaggctgtggctattttggtattcaggggctggagacaacaggct
ctggctaagaggttttgacccggtcggtgcggttgcatggatgcattcca
attacctggctgattcaaaccaaaattgattggtaacgggatcctggaca
gcagtagattgtgactttggatccaagggtactgcagttcccactggtca
ctgagcctatcgttttctcttggtaaccgtatcttatttcttcataaaac
tggagagtgtgttcttgtctcactctgcagaaacctcctaattgtccttg
tataaccccatgacacggtgggttcccggctgctgcagtggcagcctgag
ggcgggacctgtgcccactcagagatggggccttactttgttggtccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_117113851_117114374
seq2: B6Ng01-040M13.b_45_568 (reverse)

seq1  TCACCACACACCACACCCCCTTCCTAGTAGCAGCTCCTGATTTCCTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACACACCACACCCCCTTCCTAGTAGCAGCTCCTGATTTCCTTACA  50

seq1  GTGTCAACCACAGGTCCACCCACACCTACCTGTCCTTATAGTTTTTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAACCACAGGTCCACCCACACCTACCTGTCCTTATAGTTTTTCCCC  100

seq1  TGACCCACTCCCAGCTGAATCTGAATCCTCTTTGACCCATGCAGCCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCACTCCCAGCTGAATCTGAATCCTCTTTGACCCATGCAGCCACAG  150

seq1  ATGGTACAGGTAGAGGGCTCCCTCCGGGTTAGTTAGCCATCGTCTTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTACAGGTAGAGGGCTCCCTCCGGGTTAGTTAGCCATCGTCTTCTGG  200

seq1  TTCTTAGACTTGGGGATGTCTCTGTTATCCCCGCTCCACCTCAGTGTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGACTTGGGGATGTCTCTGTTATCCCCGCTCCACCTCAGTGTCCA  250

seq1  ATGGAACGGAATGGGCAAGAGAATTGGCATTCACTTGGACAAAGCACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACGGAATGGGCAAGAGAATTGGCATTCACTTGGACAAAGCACTCA  300

seq1  GCACACTTGGGAAGAGAGATGGCACCCAGCAAGTGGTATTGATCATGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTTGGGAAGAGAGATGGCACCCAGCAAGTGGTATTGATCATGTTA  350

seq1  CTAATCATAGCAGAAGGCTCATGGGTAATCCTGCCTTGTGCCCTGTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCATAGCAGAAGGCTCATGGGTAATCCTGCCTTGTGCCCTGTGGCC  400

seq1  ACTGTGAAGGAGAAGAGGCCAAGAGCAGGAGTTCCCACCTTTCTAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAAGGAGAAGAGGCCAAGAGCAGGAGTTCCCACCTTTCTAAAGTT  450

seq1  TCATCTTCAAAGTCATCTCACTCCTCCCAGTTTCCTCAGCCTGGCTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTCAAAGTCATCTCACTCCTCCCAGTTTCCTCAGCCTGGCTGAGC  500

seq1  ACATCCTCAGCTAGTTATGAATTC  524
      ||||||||||||||||||||||||
seq2  ACATCCTCAGCTAGTTATGAATTC  524

seq1: chr8_116971773_116972881
seq2: B6Ng01-040M13.g_68_1166

seq1  GAATTCAGTAGAAACTTAGAGCCTTCTCAGCAGGCTGCTGTGGGACCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGAAACTTAGAGCCTTCTCAGCAGGCTGCTGTGGGACCCAA  50

seq1  GAGGCCTGCTGTGTCCCAGTACCTTCAGGGTTGTTCTGAGAGGCTCCACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTGCTGTGTCCCAGTACCTTCAGGGTTGTTCTGAGAGGCTCCACG  100

seq1  GCTCTTTTCAGGCAAGAGTGCCATCCTTCCAGAGGCCAGAAGGTAGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTTCAGGCAAGAGTGCCATCCTTCCAGAGGCCAGAAGGTAGATGG  150

seq1  AATGGCTTCTGGGTCTCTTCGTGTTTGACAGTAAGGCTGTGGTGCATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTCTGGGTCTCTTCGTGTTTGACAGTAAGGCTGTGGTGCATTGT  200

seq1  TCCCCTGAAGTATTAGATTTTCTTGTACTTAGAGATGCTGGTCCTTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGAAGTATTAGATTTTCTTGTACTTAGAGATGCTGGTCCTTGCTG  250

seq1  TATAGAGTTCAATGTTCTTTCTTCCTGCTCTTTGCAGCCACATAAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGTTCAATGTTCTTTCTTCCTGCTCTTTGCAGCCACATAAATAAA  300

seq1  AGAACTACCTACTTGGATCCAAGATTGGCATTTACCGTGGACGATAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTACCTACTTGGATCCAAGATTGGCATTTACCGTGGACGATAATCC  350

seq1  GACGAAGCCGACCACCAGACAGAGATACGACGGGAGCACCACCGCCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGAAGCCGACCACCAGACAGAGATACGACGGGAGCACCACCGCCATGG  400

seq1  AGATCCTGCAGGGCCGGGACTTCACAGGCAAGGTGGTCCTGGTTACTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTGCAGGGCCGGGACTTCACAGGCAAGGTGGTCCTGGTTACTGGA  450

seq1  GCAAATTCGGGAATAGGTAGGCCTGCAGCTTACTGTCCTCTTATTTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTCGGGAATAGGTAGGCCTGCAGCTTACTGTCCTCTTATTTCATT  500

seq1  TATTTAATTTTTGTGAGTGCTGCAAAGAATTCTCCTTAAATGTAACTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATTTTTGTGAGTGCTGCAAAGAATTCTCCTTAAATGTAACTGTA  550

seq1  ATGAAACGTTGGTGGTGACTCTCCAATTGAAAGAGGCTGTTACAGCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACGTTGGTGGTGACTCTCCAATTGAAAGAGGCTGTTACAGCTCTC  600

seq1  TCAGCTGTTGTCTCATTAAAACCGCACTCCCTCTCCATCCCAGTGTTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGTTGTCTCATTAAAACCGCACTCCCTCTCCATCCCAGTGTTACA  650

seq1  GTGTGAGGTTTGTGGGGCCTGACCTTGAAGTTGCTCAAAGCTGAGAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGGTTTGTGGGGCCTGACCTTGAAGTTGCTCAAAGCTGAGAAGTC  700

seq1  AGCAGAAGGCTGTGGCTATTTTGGTATTCAGGGGCTGGAGACAACAGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGGCTGTGGCTATTTTGGTATTCAGGGGCTGGAGACAACAGGCT  750

seq1  CTGGCTAAGAGGTTTTGACCCGGTCGGTGCGG-TGCATGGATGCATTCCA  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTGGCTAAGAGGTTTTGACCCGGTCGGTGCGGTTGCATGGATGCATTCCA  800

seq1  ATTACCTGGCTGATTCAAACCAAAATTGATTGGTAACGGGATCCTGGACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTGGCTGATTCAAACCAAAATTGATTGGTAACGGGATCCTGGACA  850

seq1  GCAGTAGATTGTGACTTTGGATCCAAGGGTACTGCAGGTTCCCACTGGTC  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCAGTAGATTGTGACTTTGGATCCAAGGGTACTGCA-GTTCCCACTGGTC  899

seq1  ACTGAGCCTATCGTTTTCTCTTGGTAACCGTATCTTATTTCTTCATAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCCTATCGTTTTCTCTTGGTAACCGTATCTTATTTCTTCATAAAA  949

seq1  CTGGAGAGTGTGTCCTTGTCCTCACCTCTGCAGAAACCCTCCTAATTGCC  999
      ||||||||||||| ||||| |||| ||||||||||| ||||||||||| |
seq2  CTGGAGAGTGTGTTCTTGT-CTCA-CTCTGCAGAAA-CCTCCTAATTGTC  996

seq1  CCTGTTTAACCACAGTGACCACGGTGGCTTTCCGGGCTGCTGCAGTGACA  1049
      | ||| ||||| || ||| ||||||||  |||| ||||||||||||| ||
seq2  CTTGTATAACCCCA-TGA-CACGGTGG-GTTCCCGGCTGCTGCAGTGGCA  1043

seq1  GCCCTGAGGCGGGCACCTGTGCCACCTCAAGAGATGGGGCTTTACTTTGT  1099
      | |||||||  || |||||||||  ||| ||||||||||| |||||||| 
seq2  G-CCTGAGGGCGGGACCTGTGCCCACTC-AGAGATGGGGCCTTACTTTG-  1090

seq1  TTTGGTCCAT  1109
       |||||||||
seq2  -TTGGTCCAT  1099