BAC Information

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BAC

Clone NameB6Ng01-041E16
Chromosome8 (Build37)
Map Location 51,307,142 - 51,422,624
singlet/doubletdoublet
Overlap genenone
Upstream gene4930555F03Rik, LOC100039919, EG667495
Downstream geneLOC100039954, LOC100039966, LOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041E16.bB6Ng01-041E16.g
ACCDH867994DH867995
length1,0641,104
definitionDH867994|Mus musculus domesticus DNA, BAC clone: B6Ng01-041E16, 5' end.DH867995|Mus musculus domesticus DNA, BAC clone: B6Ng01-041E16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,307,142 - 51,308,211)(51,421,510 - 51,422,624)
sequence
gaattccaggctgtcctcatctacataacaattccgggccagctatgtaa
tatttcactataacatagtgaggctctgctgaaaacaagacaagcaagca
aacaaatcctataaatccacagaattagcgaataaagcctgactccaggg
gtcacagaataggcacaaagcagtcctatggtgagagagtgttggggatt
aacctttccggagtcatccctgggatattaagagaaagagagtagacaga
aatactgagttattcaataaaagaatggcacacaatgttccctcatctga
tttttaaataattttgaaagatttataagtttatatagatcactttacta
aacaattttattcaacaccatcaggtgattgctatgaataaaacgtacca
gatatgctccaagatataatttttattattgcactcatagcaatcttctc
ttagatatagaaaacatagcttaaaaggcaactccataatcaacagatgg
gaaacctatgccaagaaaaaggacttacatttttttctacatagtggttt
acaagaacaaatgaactagtaaacttgtacatactttaaatttaaaagga
aacctaattagaatattagcctcaaagataatgaaccacggaaaatgttc
ttcaagtaggaggtgttacttgtgttcagctcattgaggagatgttttct
aatgtgtgaaaacaaaaactgaagcaggctggttctaagactgtgcggag
aaataacaaaaattctgtactgaagcctctcatagagtcattcttccaca
tgcttttgccaaatatccatctttgttttctggtgggcagggtatcttat
tagctactgaacatagacgttgataaagagatgatctattccccacctgc
ttaactgatatgttgctctctgaagaccgggtctacgggacactagggaa
tgctaagaatgcagtaacttacaggcaatgacataattgatttgataatt
agggatctttttcaactcatgaaagataaggaggtttctttggattataa
cgtactcatctgcc
gaattctgtcctggtacaaaagataatgaaatacagaacatggtgatcca
aagagaagatgaagttagataaggtggaagactgattgccacattaagca
aaattacctgggaactatttgtgttttctgagcgcactgtatagtctcca
taatgatctttgtatggtattacatctcaaaattattgttaaggagttat
atagggttataatatgaaggacataacaatcaattctactaatacttaat
aattcatatatagaaaactttgacaaaagcaaaatgaatttggaaaatgt
cttctttcaaatgcctatttatacttctttaaaaactctatacaaagtaa
atgtctaattatgaatattaaagatgttacatattcaaagataacttgtg
ctaaaataaaatagagattaacttaaagattgagtcagaaagatgtctaa
aatgaacactgcataatttattgtcaaactcctattacctactgcaatgt
ttggcaaatattttggcttcagtaaatgtttgctgaactgaattaagact
gctaaactgacatttcttattttagttttgaaaatctaaaccagaggcct
ccaactatttaagatgtatggtataataccccattaccattgagcaattt
acattctagctgcccagataattgatgctgtgatgttgcctaaggattca
ctattcccatcactgcaagaagtttctatatttttctgatctgtctgtct
ttaagatacaaggtgaaagaatatacaacaaagatatgaatttaccctag
aatgaatattatttatttcatatgaacagttctttcaatacatcaaattt
ccaagctgcatcgaataatcaacacagtagctatggagttaaagtgatat
agagtattcacatagaaaatcagcatctttgcttccaccatgctgtctct
gaaaatactacactgctgacctcatcaacctatgggacgctccactcttt
tcttttcgtaaaaaataaataaaaagtaaaaaaaaaataaaactgtggga
actcaagcaaatttccgaacatcataattgtcatttcaagacctcttcct
ggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51307142_51308211
seq2: B6Ng01-041E16.b_45_1108

seq1  GAATTCCAGGCTGTCCTCATCTACATAACAATTCCGGGCCAGCTATGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCTGTCCTCATCTACATAACAATTCCGGGCCAGCTATGTAA  50

seq1  TATTTCACTATAACATAGTGAGGCTCTGCTGAAAACAAGACAAGCAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACTATAACATAGTGAGGCTCTGCTGAAAACAAGACAAGCAAGCA  100

seq1  AACAAATCCTATAAATCCACAGAATTAGCGAATAAAGCCTGACTCCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATCCTATAAATCCACAGAATTAGCGAATAAAGCCTGACTCCAGGG  150

seq1  GTCACAGAATAGGCACAAAGCAGTCCTATGGTGAGAGAGTGTTGGGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGAATAGGCACAAAGCAGTCCTATGGTGAGAGAGTGTTGGGGATT  200

seq1  AACCTTTCCGGAGTCATCCCTGGGATATTAAGAGAAAGAGAGTAGACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTCCGGAGTCATCCCTGGGATATTAAGAGAAAGAGAGTAGACAGA  250

seq1  AATACTGAGTTATTCAATAAAAGAATGGCACACAATGTTCCCTCATCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGAGTTATTCAATAAAAGAATGGCACACAATGTTCCCTCATCTGA  300

seq1  TTTTTAAATAATTTTGAAAGATTTATAAGTTTATATAGATCACTTTACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATAATTTTGAAAGATTTATAAGTTTATATAGATCACTTTACTA  350

seq1  AACAATTTTATTCAACACCATCAGGTGATTGCTATGAATAAAACGTACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTTATTCAACACCATCAGGTGATTGCTATGAATAAAACGTACCA  400

seq1  GATATGCTCCAAGATATAATTTTTATTATTGCACTCATAGCAATCTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCTCCAAGATATAATTTTTATTATTGCACTCATAGCAATCTTCTC  450

seq1  TTAGATATAGAAAACATAGCTTAAAAGGCAACTCCATAATCAACAGATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATATAGAAAACATAGCTTAAAAGGCAACTCCATAATCAACAGATGG  500

seq1  GAAACCTATGCCAAGAAAAAGGACTTACATTTTTTTCTACATAGTGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTATGCCAAGAAAAAGGACTTACATTTTTTTCTACATAGTGGTTT  550

seq1  ACAAGAACAAATGAACTAGTAAACTTGTACATACTTTAAATTTAAAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAACAAATGAACTAGTAAACTTGTACATACTTTAAATTTAAAAGGA  600

seq1  AACCTAATTAGAATATTAGCCTCAAAGATAATGAACCACGGAAAATGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAATTAGAATATTAGCCTCAAAGATAATGAACCACGGAAAATGTTC  650

seq1  TTCAAGTAGGAGGTGTTACTTGTGTTCAGCTCATTGAGGAGATGTTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTAGGAGGTGTTACTTGTGTTCAGCTCATTGAGGAGATGTTTTCT  700

seq1  AATGTGTGAAAACAAAAACTGAAGCAGGCTGGTTCTAAGACTGTGCGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGAAAACAAAAACTGAAGCAGGCTGGTTCTAAGACTGTGCGGAG  750

seq1  AAATAACAAAAATTCTGTACTGAAGCCTCTCATAGAGTCATTCTTCCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAAAAATTCTGTACTGAAGCCTCTCATAGAGTCATTCTTCCACA  800

seq1  TGCTTTTGCCAAATATCCATCTTTGTTTTCTGGTGGGCAGGGTATCTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGCCAAATATCCATCTTTGTTTTCTGGTGGGCAGGGTATCTTAT  850

seq1  TAGCTACTGAACATAGACGTTGATAAAGAGATGATCTATTCCCCACCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACTGAACATAGACGTTGATAAAGAGATGATCTATTCCCCACCTGC  900

seq1  TTAACTGATATGTTTGCTCTCTGAAGACCGGGTCTACGGGACACTAGGGA  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTAACTGATATG-TTGCTCTCTGAAGACCGGGTCTACGGGACACTAGGGA  949

seq1  ATGCTAAGAATGCAGTAACTTACAGGCAATGACCATAACTGATTTGATAA  1000
      |||||||||||||||||||||||||||||||| ||||| |||||||||||
seq2  ATGCTAAGAATGCAGTAACTTACAGGCAATGA-CATAATTGATTTGATAA  998

seq1  TTAGGATTCTTTTTCAACTCATGAAAGATAAGGAAGTATTCTTTTGGATT  1050
      |||||  ||||||||||||||||||||||||||| || ||| |||||| |
seq2  TTAGGGATCTTTTTCAACTCATGAAAGATAAGGAGGT-TTC-TTTGGA-T  1045

seq1  TATACAGTACTCAGTCTGCC  1070
      ||||  ||||||| ||||||
seq2  TATAACGTACTCA-TCTGCC  1064

seq1: chr8_51421510_51422624
seq2: B6Ng01-041E16.g_66_1169 (reverse)

seq1  ATCCAGGAAGAGGTCTTGAAAAGTGACAAATATTGACTGGTCTGGAAAAT  50
      |||||||||||||||||||||  |||||| || ||| || || |||||  
seq2  ATCCAGGAAGAGGTCTTGAAA--TGACAATTA-TGA-TGTTC-GGAAA--  43

seq1  TTGGCTGTAGTTGCCACAGTTTT-GTATTTATTTACTTATTTATTTATTT  99
      || |||  |||| ||||||||||  | ||| ||||||| |||||||||||
seq2  TTTGCTTGAGTTCCCACAGTTTTATTTTTTTTTTACTT-TTTATTTATTT  92

seq1  ATTAACGAAAAG-AAAGAGTGGAGCGTACCATAAGGTGGATGAGGTCAGC  148
       || |||||||| |||||||||||||| |||| |||| ||||||||||||
seq2  -TTTACGAAAAGAAAAGAGTGGAGCGTCCCAT-AGGTTGATGAGGTCAGC  140

seq1  AGTGTAGTATTTTCAGAGACAGCATGGTTGGAAGCAAAGATGCCTGATTT  198
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  AGTGTAGTATTTTCAGAGACAGCATGG-TGGAAGCAAAGATG-CTGATTT  188

seq1  TCTATGTGAATACTCTATAATCACTTTTAACTCCATAGCTACTGTGTTGA  248
      |||||||||||||||||| ||||| |||||||||||||||||||||||||
seq2  TCTATGTGAATACTCTAT-ATCAC-TTTAACTCCATAGCTACTGTGTTGA  236

seq1  TTATTCGATGCAGCTTGGAAATTTGATGTATTGAAAGAACTGTTCATATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCGATGCAGCTTGGAAATTTGATGTATTGAAAGAACTGTTCATATG  286

seq1  AAATAAATAATATTCATTCTAGGGTAAATTCATATCTTTGTTGTATATTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAATATTCATTCTAGGGTAAATTCATATCTTTGTTGTATATTC  336

seq1  TTTCACCTTGTATCTTAAAGACAGACAGATCAG-AAAATATAGAAACTTC  397
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTCACCTTGTATCTTAAAGACAGACAGATCAGAAAAATATAGAAACTTC  386

seq1  TTGCAGTGATGGGAATAGTGAATCCTTAGGCAACATCACAGCATCAATTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTGATGGGAATAGTGAATCCTTAGGCAACATCACAGCATCAATTA  436

seq1  TCTGGGCAGCTAGAATGTAAATTGCTCAATGGTAATGGGGTATTATACCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCAGCTAGAATGTAAATTGCTCAATGGTAATGGGGTATTATACCA  486

seq1  TACATCTTAAATAGTTGGAGGCCTCTGGTTTAGATTTTCAAAACTAAAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTTAAATAGTTGGAGGCCTCTGGTTTAGATTTTCAAAACTAAAAT  536

seq1  AAGAAATGTCAGTTTAGCAGTCTTAATTCAGTTCAGCAAACATTTACTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGTCAGTTTAGCAGTCTTAATTCAGTTCAGCAAACATTTACTGA  586

seq1  AGCCAAAATATTTGCCAAACATTGCAGTAGGTAATAGGAGTTTGACAATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAATATTTGCCAAACATTGCAGTAGGTAATAGGAGTTTGACAATA  636

seq1  AATTATGCAGTGTTCATTTTAGACATCTTTCTGACTCAATCTTTAAGTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGCAGTGTTCATTTTAGACATCTTTCTGACTCAATCTTTAAGTTA  686

seq1  ATCTCTATTTTATTTTAGCACAAGTTATCTTTGAATATGTAACATCTTTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTATTTTATTTTAGCACAAGTTATCTTTGAATATGTAACATCTTTA  736

seq1  ATATTCATAATTAGACATTTACTTTGTATAGAGTTTTTAAAGAAGTATAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATAATTAGACATTTACTTTGTATAGAGTTTTTAAAGAAGTATAA  786

seq1  ATAGGCATTTGAAAGAAGACATTTTCCAAATTCATTTTGCTTTTGTCAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCATTTGAAAGAAGACATTTTCCAAATTCATTTTGCTTTTGTCAAA  836

seq1  GTTTTCTATATATGAATTATTAAGTATTAGTAGAATTGATTGTTATGTCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTATATATGAATTATTAAGTATTAGTAGAATTGATTGTTATGTCC  886

seq1  TTCATATTATAACCCTATATAACTCCTTAACAATAATTTTGAGATGTAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTATAACCCTATATAACTCCTTAACAATAATTTTGAGATGTAAT  936

seq1  ACCATACAAAGATCATTATGGAGACTATACAGTGCGCTCAGAAAACACAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATACAAAGATCATTATGGAGACTATACAGTGCGCTCAGAAAACACAA  986

seq1  ATAGTTCCCAGGTAATTTTGCTTAATGTGGCAATCAGTCTTCCACCTTAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCCCAGGTAATTTTGCTTAATGTGGCAATCAGTCTTCCACCTTAT  1036

seq1  CTAACTTCATCTTCTCTTTGGATCACCATGTTCTGTATTTCATTATCTTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTCATCTTCTCTTTGGATCACCATGTTCTGTATTTCATTATCTTT  1086

seq1  TGTACCAGGACAGAATTC  1115
      ||||||||||||||||||
seq2  TGTACCAGGACAGAATTC  1104