BAC Information

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BAC

Clone NameB6Ng01-041H13
Chromosome8 (Build37)
Map Location 40,447,258 - 40,447,784
singlet/doubletsinglet
Overlap geneEG621335
Upstream geneTusc3, LOC100038974, LOC632066
Downstream geneLOC434304, Msr1, EG621431, LOC100039072, LOC666959, EG632166, Fgf20, 2900075B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041H13.bB6Ng01-041H13.g
ACCDH868126DH868127
length5271,071
definitionDH868126|Mus musculus domesticus DNA, BAC clone: B6Ng01-041H13, 5' end.DH868127|Mus musculus domesticus DNA, BAC clone: B6Ng01-041H13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattcacactcagagagaggagggagagaaagagggagagaggg
agagagagggagtgaggaggtggagagaattccatttgtttatatacggt
gtccatacaaattttgctctttgtatacacttgtcatttaggacatgtgg
atttcatatttggttaaaaacagcctgtatttgtgtggagtctcttttgt
tttaaaaagttgcctttatttctgatgctttttattcatttttcagttat
attggttagctgtctgaggaagcagaaatagttgtatcaaaatcagtgta
tatcttcaaatcagtgcatcattaccatacatgatgtgaaaacactaaaa
aggtacttaattttctctctcttctgttgatcctgatctcctcttgcaca
ctgactattttttagtggattacagttgtttcagctacctagtaatgaaa
attattttgtgcttcttttctttcatattccctttatcttggttgagtat
tttatccctacatgtgatgcttgaaat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagatatgctgaaag
gaccctgatatagctgtctcttgtcgagttatgcctgggcctagcaaaca
tagaagtggatgctcacagtctgctattggatggatcacatggccccaat
gaagagctaaagaaagtactaaagaagttatgggatctgcaactctataa
gtggacaacttatgactatcagtacccggagttcttgactctgctgcata
ggcatctaaaagatggccatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_40447258_40447784
seq2: B6Ng01-041H13.b_31_557 (reverse)

seq1  ATTTCAAGCATCACATGTAGGGATAAAATACTCAACCAAGATAAAGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGCATCACATGTAGGGATAAAATACTCAACCAAGATAAAGGGAA  50

seq1  TATGAAAGAAAAGAAGCACAAAATAATTTTCATTACTAGGTAGCTGAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAGAAAAGAAGCACAAAATAATTTTCATTACTAGGTAGCTGAAAC  100

seq1  AACTGTAATCCACTAAAAAATAGTCAGTGTGCAAGAGGAGATCAGGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAATCCACTAAAAAATAGTCAGTGTGCAAGAGGAGATCAGGATCA  150

seq1  ACAGAAGAGAGAGAAAATTAAGTACCTTTTTAGTGTTTTCACATCATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGAGAGAGAAAATTAAGTACCTTTTTAGTGTTTTCACATCATGTA  200

seq1  TGGTAATGATGCACTGATTTGAAGATATACACTGATTTTGATACAACTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATGATGCACTGATTTGAAGATATACACTGATTTTGATACAACTAT  250

seq1  TTCTGCTTCCTCAGACAGCTAACCAATATAACTGAAAAATGAATAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTCCTCAGACAGCTAACCAATATAACTGAAAAATGAATAAAAAG  300

seq1  CATCAGAAATAAAGGCAACTTTTTAAAACAAAAGAGACTCCACACAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAAATAAAGGCAACTTTTTAAAACAAAAGAGACTCCACACAAATA  350

seq1  CAGGCTGTTTTTAACCAAATATGAAATCCACATGTCCTAAATGACAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGTTTTTAACCAAATATGAAATCCACATGTCCTAAATGACAAGTG  400

seq1  TATACAAAGAGCAAAATTTGTATGGACACCGTATATAAACAAATGGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAAGAGCAAAATTTGTATGGACACCGTATATAAACAAATGGAATT  450

seq1  CTCTCCACCTCCTCACTCCCTCTCTCTCCCTCTCTCCCTCTTTCTCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACCTCCTCACTCCCTCTCTCTCCCTCTCTCCCTCTTTCTCTCCC  500

seq1  TCCTCTCTCTGAGTGTGAATGGAATTC  527
      |||||||||||||||||||||||||||
seq2  TCCTCTCTCTGAGTGTGAATGGAATTC  527