BAC Information

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BAC

Clone NameB6Ng01-041K06
Chromosome8 (Build37)
Map Location 14,427,150 - 14,571,406
singlet/doubletdoublet
Overlap geneDlgap2
Upstream geneGm687, Gas6, LOC434282, 1700029H14Rik, Rasa3, 4932443I19Rik, LOC665516, Cdc16, Upf3a, AF366264, D8Ertd457e, 2410022L05Rik, EG665536, Fbxo25, LOC100041103, 2610019F03Rik, EG546036, Erich1, LOC100041140
Downstream geneC030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2, EG665599, EG234097
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041K06.bB6Ng01-041K06.g
ACCDH868245DH868246
length1,005962
definitionDH868245|Mus musculus domesticus DNA, BAC clone: B6Ng01-041K06, 5' end.DH868246|Mus musculus domesticus DNA, BAC clone: B6Ng01-041K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,427,150 - 14,428,155)(14,570,439 - 14,571,406)
sequence
gaattctttcccagctatttagcgaccctgagcatcctctagcacatgac
tcaagcagaaggctgcttagatttgacccagcacccacctcagccagcag
gttcctcccccagtgcatgctccttgtggagcctgaattctaaccctatc
cactgtccttccacagcaccttacagggaagaagtcacagccttccccaa
ctcagtgaaggctgtagaggattcgccatgaacaaggtggcagtgtatag
ggccaggctagcccggcaaggaagggatgctggcagctgtggcgtctgct
ctgtggacctactgccactctacagacattgctttattgcagatcccttg
gatgagcaaacactgcctgccatcagcttggcctacatctgttccctaaa
ggtccagaggccaggctagggttcctgtgtaaaaataaaagaggccagga
aattacagaaaatgtcaaagttcattaggtgcacaaacggagattgaact
atagaaaagaaagctaaataaaattcttaaagagttgtttttaagtggaa
tcacacgacctatgtttcccattccggggagaaatctgttagctttctgc
tttctctcttgccctgcagcctgcggtttgggctgcagtggagctgagct
gccctctggtcagccacccttgcctttgcatctgttagttgagatgtttt
agccccttttgaggatgggaaaagcccatgcttccttgttagccacagtg
ttccctgcgagtaaacttcagaacaattgtgtaaagtcacaggcgtcacc
tgcgatccgatcctcatctcgacagtccttctctgccggtgcccacagag
tgttgttgcaaggagaagcatcacgactctgattccctttgtgaggcatg
tgggcaaagaggccaaggggtgggcacagcatggggatgctgggcctaat
gcttccctggatcttcccttcagcgaagcttgccttaggaaagcagaagt
cctaa
gaattctcctaatgtgctttaaactgggcctttgagctcactggggcatc
tctatcttggtaatgggagaccccagcatgctggacttctgcagaataaa
actctttgtttttgcatactatttgagtccagggtattattattcagcaa
atcatggacccttccagggtaatacccagagtacacacaagcagggctat
gctgccagtcacctgcagagtgaggtattgtttactgattggtggagccc
tgaggaatctaagtggagaggatcaacgatgcattattctaaagaggcaa
cgttttgctttatctgttaaaacaatattgaatgctaaaggtacaaccac
aaggtaaacaagaggacataaaacagtatttcagctcctgggaatgggct
ctgctggttcctggccacaggccacttgtgtgttaggcttctggcttttc
gtttccaaggcaattccaagtccatgcagcacacagacacagacactcta
cgaaatacagtgttcagcccttggctctgacctttcccagacaggaatgg
gtggcaccatgcacaggccagtgtgcatatgctgggtctaacctctgtcc
ttttcttcctaagggagcacaaataaggcacgagcctgcctcaagcttta
ggaaacacagcatccctgaaagggatccatgcatgatggtagcttgaacc
tcctcactctccagcctccagtcctccccagtcgtcctgggagcagacac
ggatgtcatggcagtaacaatttcttctgtgtggatacccaattcatctc
caaccattaaccctatgtaccctggaatagctgcactctatgtttatggg
catgtgtgtgtgtgacagttccaagttcatgagtctggtcgaaagcatga
gatttaactttactttgtaaacatttcccagtggttaaaaaaaaaatacc
taaaaaaacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_14427150_14428155
seq2: B6Ng01-041K06.b_39_1043

seq1  GAATTCTTTCCCAGCTATTTAGCGACCCTGAGCATCCTCTAGCACATGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCAGCTATTTAGCGACCCTGAGCATCCTCTAGCACATGAC  50

seq1  TCAAGCAGAAGGCTGCTTAGATCTGACCCAGCACCCACCTCAGCCAGCAG  100
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCAAGCAGAAGGCTGCTTAGATTTGACCCAGCACCCACCTCAGCCAGCAG  100

seq1  GTTCCTCCCCCAGTGCATGCTCCTTGTGGAGCCTGAATTCTAACCCTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCCCCCAGTGCATGCTCCTTGTGGAGCCTGAATTCTAACCCTATC  150

seq1  CACTGTCCTTCCACAGCACCTTACAGGGAAGAAGTCACAGCCTTCCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCCTTCCACAGCACCTTACAGGGAAGAAGTCACAGCCTTCCCCAA  200

seq1  CTCAGTGAAGGCTGTAGAGGATTCGCCATGAACAAGGTGGCAGTGTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGAAGGCTGTAGAGGATTCGCCATGAACAAGGTGGCAGTGTATAG  250

seq1  GGCCAGGCTAGCCCGGCAAGGAAGGGATGCTGGCAGCTGTGGCGTCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGCTAGCCCGGCAAGGAAGGGATGCTGGCAGCTGTGGCGTCTGCT  300

seq1  CTGTGGACCTACTGCCACTCTACAGACATTGCTTTATTGCAGATCCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGACCTACTGCCACTCTACAGACATTGCTTTATTGCAGATCCCTTG  350

seq1  GATGAGCAAACACTGCCTGCCATCAGCTTGGCCTACATCTGTTCCCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCAAACACTGCCTGCCATCAGCTTGGCCTACATCTGTTCCCTAAA  400

seq1  GGTCCAGAGGCCAGGCTAGGGTTCCTGTGTAAAAATAAAAGAGGCCAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGAGGCCAGGCTAGGGTTCCTGTGTAAAAATAAAAGAGGCCAGGA  450

seq1  AATTACAGAAAATGTCAAAGTTCATTAGGTGCACAAACGGAGATTGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAGAAAATGTCAAAGTTCATTAGGTGCACAAACGGAGATTGAACT  500

seq1  ATAGAAAAGAAAGCTAAATAAAATTCTTAAAGAGTTGTTTTTAAGTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAGAAAGCTAAATAAAATTCTTAAAGAGTTGTTTTTAAGTGGAA  550

seq1  TCACACGACCTATGTTTCCCATTCCGGGGAGAAATCTGTTAGCTTTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACGACCTATGTTTCCCATTCCGGGGAGAAATCTGTTAGCTTTCTGC  600

seq1  TTTCTCTCTTGCCCTGCAGCCTGCGGTTTGGGCTGCAGTGGAGCTGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTTGCCCTGCAGCCTGCGGTTTGGGCTGCAGTGGAGCTGAGCT  650

seq1  GCCCTCTGGTCAGCCACCCTTGCCTTTGCATCTGTTAGTTGAGATGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTGGTCAGCCACCCTTGCCTTTGCATCTGTTAGTTGAGATGTTTT  700

seq1  AGCCCCTTTTGAGGATGGGAAAAGCCCATGCTTCCTTGTTAGCCACAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTTTTGAGGATGGGAAAAGCCCATGCTTCCTTGTTAGCCACAGTG  750

seq1  TTCCCTGCGAGTAAACTTTCAGAACAATTGTGTAAAGTCACAGGCGTCAC  800
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTCCCTGCGAGTAAAC-TTCAGAACAATTGTGTAAAGTCACAGGCGTCAC  799

seq1  CTGCGATCCGATCCCCATCTCGACAGTCCTTCCCTGCCGGTGCCCACAGA  850
      |||||||||||||| ||||||||||||||||| |||||||||||||||||
seq2  CTGCGATCCGATCCTCATCTCGACAGTCCTTCTCTGCCGGTGCCCACAGA  849

seq1  G-GGTGGTGCAAGGAGAAGCATCAGGACTCTGATTCCC-TTGTGAGGCCA  898
      | | || ||||||||||||||||| ||||||||||||| |||||||| ||
seq2  GTGTTGTTGCAAGGAGAAGCATCACGACTCTGATTCCCTTTGTGAGG-CA  898

seq1  TGTGGGCACAGAGGCGAGGGAGTGGGCACAGCATGGGGATGCTGGGCCTA  948
      |||||||| |||||| | || |||||||||||||||||||||||||||||
seq2  TGTGGGCAAAGAGGCCAAGGGGTGGGCACAGCATGGGGATGCTGGGCCTA  948

seq1  ACTGCTTCCCTGGATC-TCCCTCCAGCGAAGCTTGCCTTAGGGAAAGCAG  997
      | |||||||||||||| ||||| ||||||||||||||||| |||||||||
seq2  A-TGCTTCCCTGGATCTTCCCTTCAGCGAAGCTTGCCTTA-GGAAAGCAG  996

seq1  AAGTCCTAA  1006
      |||||||||
seq2  AAGTCCTAA  1005

seq1: chr8_14570439_14571406
seq2: B6Ng01-041K06.g_68_1029 (reverse)

seq1  TATGTTTTTTTTATGGTTTTTTTTTTTTAACCACTGTGAAAATGTTTTAC  50
      |||||||||||   ||| |||||||||||||||||| | ||||| |||||
seq2  TATGTTTTTTT--AGGTATTTTTTTTTTAACCACTG-GGAAATG-TTTAC  46

seq1  AAAGTAAGGTTAAAATCTCATGCCTTCGACCAGACTCATGAACTTGGAAC  100
      ||||||| ||| ||||||||||| ||||||||||||||||||||||||||
seq2  AAAGTAAAGTT-AAATCTCATGCTTTCGACCAGACTCATGAACTTGGAAC  95

seq1  TGTCACACACACACATGCCCATAAACATAGAGTGCAGCTATTCCAGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACACACACACATGCCCATAAACATAGAGTGCAGCTATTCCAGGGTA  145

seq1  CATAGGGTTAAATGGTTGAAGATGAATTGGGTATCCACACAGAAGAAATT  200
      ||||||||| |||||||| |||||||||||||||||||||||||||||||
seq2  CATAGGGTT-AATGGTTGGAGATGAATTGGGTATCCACACAGAAGAAATT  194

seq1  GTTACTGCCATGTACATCCGTGTCTGCTCCCAGGACGACTGGGGAGGACT  250
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTTACTGCCATG-ACATCCGTGTCTGCTCCCAGGACGACTGGGGAGGACT  243

seq1  GGAGGCTGGAGAGTGAGGAGGTTCAAGCTACCATCATGCATGGATCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTGGAGAGTGAGGAGGTTCAAGCTACCATCATGCATGGATCCCTT  293

seq1  TCAGGGATGCTGTGTTTCCTAAAGCTTGAGGCAGGCTCGTGCCTTATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGATGCTGTGTTTCCTAAAGCTTGAGGCAGGCTCGTGCCTTATTTG  343

seq1  TGCTCCCTTAGGAAG-AAAGGACAGAGGTTAGACCCAGCATATGCACACT  399
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGCTCCCTTAGGAAGAAAAGGACAGAGGTTAGACCCAGCATATGCACACT  393

seq1  GGCCTGTGCATGGTGCCACCCATTCCTGTCTGGGAAAGGTCAGAGCCAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTGCATGGTGCCACCCATTCCTGTCTGGGAAAGGTCAGAGCCAAG  443

seq1  GGCTGAACACTGTATTTCGTAGAGTGTCTGTGTCTGTGTGCTGCATGGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAACACTGTATTTCGTAGAGTGTCTGTGTCTGTGTGCTGCATGGAC  493

seq1  TTGGAATTGCCTTGGAAACGAAAAGCCAGAAGCCTAACACACAAGTGGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTGCCTTGGAAACGAAAAGCCAGAAGCCTAACACACAAGTGGCC  543

seq1  TGTGGCCAGGAACCAGCAGAGCCCATTCCCAGGAGCTGAAATACTGTTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCAGGAACCAGCAGAGCCCATTCCCAGGAGCTGAAATACTGTTTT  593

seq1  ATGTCCTCTTGTTTACCTTGTGGTTGTACCTTTAGCATTCAATATTGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTCTTGTTTACCTTGTGGTTGTACCTTTAGCATTCAATATTGTTT  643

seq1  TAACAGATAAAGCAAAACGTTGCCTCTTTAGAATAATGCATCGTTGATCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGATAAAGCAAAACGTTGCCTCTTTAGAATAATGCATCGTTGATCC  693

seq1  TCTCCACTTAGATTCCTCAGGGCTCCACCAATCAGTAAACAATACCTCAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACTTAGATTCCTCAGGGCTCCACCAATCAGTAAACAATACCTCAC  743

seq1  TCTGCAGGTGACTGGCAGCATAGCCCTGCTTGTGTGTACTCTGGGTATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGGTGACTGGCAGCATAGCCCTGCTTGTGTGTACTCTGGGTATTA  793

seq1  CCCTGGAAGGGTCCATGATTTGCTGAATAATAATACCCTGGACTCAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAAGGGTCCATGATTTGCTGAATAATAATACCCTGGACTCAAATA  843

seq1  GTATGCAAAAACAAAGAGTTTTATTCTGCAGAAGTCCAGCATGCTGGGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAAAAACAAAGAGTTTTATTCTGCAGAAGTCCAGCATGCTGGGGT  893

seq1  CTCCCATTACCAAGATAGAGATGCCCCAGTGAGCTCAAAGGCCCAGTTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATTACCAAGATAGAGATGCCCCAGTGAGCTCAAAGGCCCAGTTTA  943

seq1  AAGCACATTAGGAGAATTC  968
      |||||||||||||||||||
seq2  AAGCACATTAGGAGAATTC  962