BAC Information

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BAC

Clone NameB6Ng01-042E18
Chromosome8 (Build37)2 (Build37)
Map Location 117,206,500 - 117,206,583138,595,011 - 138,596,102
singlet/doubletsingletsinglet
Overlap geneWwox
Upstream geneAdamts18, Nudt7, AI427515, Clec3a
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042E18.bB6Ng01-042E18.g
ACCDH868715DH868716
length1611,085
definitionDH868715|Mus musculus domesticus DNA, BAC clone: B6Ng01-042E18, 5' end.DH868716|Mus musculus domesticus DNA, BAC clone: B6Ng01-042E18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(117,206,500 - 117,206,583)(138,595,011 - 138,596,102)
sequence
tcagaccactgtacttgtgatgtgaaatagaaataagccattttactata
tatgacgaaccaaagctctcctgtggcttgcctgcctccctccctccctc
cctccctccctccctccctccttccttccttccttccttctttctttctt
tctttctttct
gaattctctccacctgtaaagcagtggaatgcaaaattgaattctgacga
aagggcaatcaaggggcactcctctttttaagaaaagcatagatttcaag
gctttggtgctgatgcacagactcatttgaatacctctttgctttttgca
aatcacctgtctttataagatgtctctactttttcaagtaaggttatttc
tatataggaagtatgatttaacaatttttcaaagagcactttctttatag
cagtcttgatgactatccatttatccaaggttgattagaaagccttacag
aggatactttctatccacggggacgactatcataattctgtggcttctcg
gcaaaagagaccttgacagtgaacgctgacacatggaaagaccaattcat
ttgttcacagagaattcaattggcttggaagaaaatgtatttgtttagag
gtcttgtggcctgtttatcctgtattcatcttgatatgactggttaagag
tctaaaaagcatcttagttttaattggggcaaaactcttcgccaactgaa
aactgacttcagcaggtcagccattttccatagcatttgacagctttaag
gaaattacagctccattgccttgtaagtttacgttgtggtacaatggtca
caactaaacacattcaaggcactcagtaaatgcaacattgtacaggctat
tctgaaaattaacgttatatagctggccttctttacataaatacaaacac
acatacatacatggacacatatgataatagttcactttctctgctgccaa
tatatttctaatatgtaaattcctcataccttagggaaataaaccaaggt
aattggtatataattacagaggtccaactgtgtcctactatcccagtcat
ttattagctaggtcaagagccaagggcccacaaagcctcagtgtgtttga
aatttatttatatatatatataaaacagtgtattttacctgcattttttt
aagatacagaagattgtggctatcaacagtcttctgaaaagatttgattt
gctgtgtgtagctttttgttacaagttgcattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_117206500_117206583
seq2: B6Ng01-042E18.b_134_210 (reverse)

seq1  AGAAAGAAAGAAAGAAAAAGAGAAAAAGAAGGAAGGAAGGAAGGAAGGAA  50
      ||||||||||||||||      | |||||||||||||||||||||||| |
seq2  AGAAAGAAAGAAAGAA------AGAAAGAAGGAAGGAAGGAAGGAAGG-A  43

seq1  GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG  84
      ||||||||||||||||||||||||||||||||||
seq2  GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG  77

seq1: chr2_138595011_138596102
seq2: B6Ng01-042E18.g_66_1150

seq1  GAATTCTCTCCACCTGTAAAGCAGTGGAATGCAAAATTGAATTCTGACGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCACCTGTAAAGCAGTGGAATGCAAAATTGAATTCTGACGA  50

seq1  AAGGGCAATCAAGGGGCACTCCTCTTTTTAAGAAAAGCATAGATTTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAATCAAGGGGCACTCCTCTTTTTAAGAAAAGCATAGATTTCAAG  100

seq1  GCTTTGGTGCTGATGCACAGACTCATTTGAATACCTCTTTGCTTTTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGTGCTGATGCACAGACTCATTTGAATACCTCTTTGCTTTTTGCA  150

seq1  AATCACCTGTCTTTATAAGATGTCTCTACTTTTTCAAGTAAGGTTATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCTGTCTTTATAAGATGTCTCTACTTTTTCAAGTAAGGTTATTTC  200

seq1  TATATAGGAAGTATGATTTAACAATTTTTCAAAGAGCACTTTCTTTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGGAAGTATGATTTAACAATTTTTCAAAGAGCACTTTCTTTATAG  250

seq1  CAGTCTTGATGACTATCCATTTATCCAAGGTTGATTAGAAAGCCTTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTGATGACTATCCATTTATCCAAGGTTGATTAGAAAGCCTTACAG  300

seq1  AGGATACTTTCTATCCACGGGGACGACTATCATAATTCTGTGGCTTCTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACTTTCTATCCACGGGGACGACTATCATAATTCTGTGGCTTCTCG  350

seq1  GCAAAAGAGACCTTGACAGTGAACGCTGACACATGGAAAGACCAATTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGAGACCTTGACAGTGAACGCTGACACATGGAAAGACCAATTCAT  400

seq1  TTGTTCACAGAGAATTCAATTGGCTTGGAAGAAAATGTATTTGTTTAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCACAGAGAATTCAATTGGCTTGGAAGAAAATGTATTTGTTTAGAG  450

seq1  GTCTTGTGGCCTGTTTATCCTGTATTCATCTTGATATGACTGGTTAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTGGCCTGTTTATCCTGTATTCATCTTGATATGACTGGTTAAGAG  500

seq1  TCTAAAAAGCATCTTAGTTTTAATTGGGGCAAAACTCTTCGCCAACTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAAGCATCTTAGTTTTAATTGGGGCAAAACTCTTCGCCAACTGAA  550

seq1  AACTGACTTCAGCAGGTCAGCCATTTTCCATAGCATTTGACAGCTTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACTTCAGCAGGTCAGCCATTTTCCATAGCATTTGACAGCTTTAAG  600

seq1  GAAATTACAGCTCCATTGCCTTGTAAGTTTACGTTGTGGTACAATGGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTACAGCTCCATTGCCTTGTAAGTTTACGTTGTGGTACAATGGTCA  650

seq1  CAACTAAACACATTCAAGGCACTCAGTAAATGCAACATTGTACAGGCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAAACACATTCAAGGCACTCAGTAAATGCAACATTGTACAGGCTAT  700

seq1  TCTGAAAATTAACGTTATATAGCTGGCCTTCTTTACATAAATACAAACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAATTAACGTTATATAGCTGGCCTTCTTTACATAAATACAAACAC  750

seq1  ACATACATACATGGACACATATGATAATAGTTCACTTTCTCTGCTGCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACATGGACACATATGATAATAGTTCACTTTCTCTGCTGCCAA  800

seq1  TATATTTCTAATATGTAAATTCCTCATACCTTAGGGAAATAAACCAAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCTAATATGTAAATTCCTCATACCTTAGGGAAATAAACCAAGGT  850

seq1  AATTGGTATATAATTACAGAGGTCCAACTGTGTCCTACTATCCCAGTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTATATAATTACAGAGGTCCAACTGTGTCCTACTATCCCAGTCAT  900

seq1  TTATTAGCTAGGTCAAGAGCCAAGGGCCCACAAAGCCTCAGTGTGTTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGCTAGGTCAAGAGCCAAGGGCCCACAAAGCCTCAGTGTGTTTGA  950

seq1  AATTTATTTATATATATATATAAAACAGTGTATTTTACCTGCATTTTTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTATATATATATATAAAACAGTGTATTTTACCTGCATTTTTTT  1000

seq1  AAAGATACCAGAAGATTGTGGCTATCATACAGTCTTCTGAAAAGATTTTG  1050
       |||||| ||||||||||||||||||| ||||||||||||||||| ||||
seq2  -AAGATA-CAGAAGATTGTGGCTATCA-ACAGTCTTCTGAAAAGA-TTTG  1046

seq1  ATTTTGCTGTGTGTAGCTTTTTGTTACCAGTTTGCATGTAAA  1092
      | ||||||||||||||||||||||||| || |||||| ||||
seq2  A-TTTGCTGTGTGTAGCTTTTTGTTACAAG-TTGCAT-TAAA  1085