BAC Information

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BAC

Clone NameB6Ng01-042J23
Chromosome8 (Build37)
Map Location 115,604,688 - 115,605,917
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042040, Cntnap4, LOC100042061
Downstream geneMon1b, 4930481F22Rik, Adamts18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042J23.bB6Ng01-042J23.g
ACCDH868938DH868939
length1,221521
definitionDH868938|Mus musculus domesticus DNA, BAC clone: B6Ng01-042J23, 5' end.DH868939|Mus musculus domesticus DNA, BAC clone: B6Ng01-042J23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattccctcctgtctttaaggcataattatatcttagttagttat
atgttagttacttttatattatcgggcttaaaataactgatataaacaat
atctgatagggaaacatccattttgatttatggtttcaaagggtttagga
aatgcttactgagccttgtgaactttggtgggccatcatggtggtagatt
aatagggtggaagattgtcctacatcaaggtttacataaaaacagagaaa
ttagggcacagaaagagggcaaagctaacaatgaccaccaaggaaactcc
atagggaaccacttcctctaacctctggtttttccatacctctggttttt
caccatctctcaataatattgccataataggaacacatcatcaaatgaat
caattcaataagtcaaagttcttacaatgtagttatctctggaaacaccg
tttccaacacccagattatactaatgtcctaggcatttctaaaccaaatc
aagttgacaaagaacattcccatcatggtcattttgttaagatcccccta
ctcttattgtttatttgtggcggttttccatctgtagaatgcctccccat
attggttagttgtcagtttctatgtattctttgtgtactgaaagttgagt
caaatcactctcccctagtaggctagctctattaaattagctttgaataa
aatcattcttatcttaacatatgtcagaatcatttttctttaacctgtgt
tcaccatcctctatctctgtatctctatatctctctgtctctgtctctat
ctatctatctatctatctatctatctatctatctatctatctatcatctc
tgtctctctgtctatttgcctctctgtatcactctttgtctccctatctt
gcccgccccctctgtttctgcagagaataaagttcctctgcttttctttg
tcataggacagcaactaatcagaatagagactctttctagtagttccatg
accttgtgggcagataaagcctcagttattccttctttctgctgattttg
aaggttatgcaaaggtaacaactacagggatccattccataattactaat
ttgctcatgcattggaatatgctaatctttgtcttagtcaagcaattggg
aatctaatgagtttagcatacctatctgagatcagccaaggttctttagc
ctcctccacagatatagcact

caaagtgtggatacttcgtccctccttagaatggggaacaaaatacccat
gtaaggagttacagagacaaagtttggagatgagacagaaggaacaacca
tgcagagactgccccatctggggatccataccataatcaaccaccaaatg
cagacactattgcatatgccagcaagattttgctgacaggaccctgatat
agctgactcttgtgaggcactgccagtgcctggcaaatacagaagtggat
gctcagagtcatctattggatggaacacatggcccctgatggagaagata
aagtacccaaggagctgaaggggtctgtaaagctataggaggaacagcaa
tatgaactaaccagtactcccagagctcatgtctctagctgcatatgtag
cagaagatgacctaattggccatcattgggaggagaggcccttggtcttg
caaagattatatgccccaatacagaggaggaataccagggccaggaagag
ggagtgggtgggttggggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_115604688_115605917
seq2: B6Ng01-042J23.b_42_1262 (reverse)

seq1  AGTGCTAT---------TGAAGCTAAAGGAACCTCTGGGCTGATCTCTAG  41
      ||||||||          || |||||| ||||  || |||||||||| ||
seq2  AGTGCTATATCTGTGGAGGAGGCTAAA-GAAC--CTTGGCTGATCTC-AG  46

seq1  AGTATGGTGATGCTTAACTTCACT-GATGATTCCAATTGCTTGGACTAAA  90
      | || ||| ||||| ||| ||| | |||  | |||||||||| ||||  |
seq2  A-TA-GGT-ATGCTAAAC-TCATTAGAT--TCCCAATTGCTT-GACT--A  87

seq1  AGACAAAGATATAGCATGATTTCAATGCCATGAGCATATTAGTATATTAT  140
      |||||||||| |||||| ||| ||||| |||||||| ||||||| |||||
seq2  AGACAAAGAT-TAGCAT-ATTCCAATG-CATGAGCAAATTAGTA-ATTAT  133

seq1  GGAATGGATCCTTGTTAGTATGGTTACTTTGCATAACC-TCAAAATCAGC  189
      ||||||||||| || |||| || |  |||||||||||| |||||||||||
seq2  GGAATGGATCCCTG-TAGT-TGTTACCTTTGCATAACCTTCAAAATCAGC  181

seq1  AGGAAGAGGGATAACCTGAGGCTTTATCTGCCCAC-AGGTCATGGAACTA  238
      || |||| |||  | |||||||||||||||||||| ||||||||||||||
seq2  AGAAAGAAGGAATAACTGAGGCTTTATCTGCCCACAAGGTCATGGAACTA  231

seq1  CCTAG-AAGAGTCTCCTATTCCTGATTAGTTGCCTGTTCCTATGACAA--  285
       |||| |||||||| ||||| ||||||||||| ||| |||||||||||  
seq2  -CTAGAAAGAGTCT-CTATT-CTGATTAGTTG-CTG-TCCTATGACAAAG  276

seq1  GAAAGCAGAGGAACTTTATTCTCTGCAGAAACAGAGGGGGCGGGCAAGAT  335
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGAGGAACTTTATTCTCTGCAGAAACAGAGGGGGCGGGCAAGAT  326

seq1  AGGGAGACAAAGAGTGATACAGAGAGGCAAATAGACAGAGAGACAGAGAT  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGACAAAGAGTGATACAGAGAGGCAAATAGACAGAGAGACAGAGAT  376

seq1  GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA  426

seq1  GACAGAGACAGAGAGATATAGAGATACAGAGATAGAGGATGGTGAACACA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGACAGAGAGATATAGAGATACAGAGATAGAGGATGGTGAACACA  476

seq1  GGTTAAAGAAAAATGATTCTGACATATGTTAAGATAAGAATGATTTTATT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAGAAAAATGATTCTGACATATGTTAAGATAAGAATGATTTTATT  526

seq1  CAAAGCTAATTTAATAGAGCTAGCCTACTAGGGGAGAGTGATTTGACTCA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTAATTTAATAGAGCTAGCCTACTAGGGGAGAGTGATTTGACTCA  576

seq1  ACTTTCAGTACACAAAGAATACATAGAAACTGACAACTAACCAATATGGG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAGTACACAAAGAATACATAGAAACTGACAACTAACCAATATGGG  626

seq1  GAGGCATTCTACAGATGGAAAACCGCCACAAATAAACAATAAGAGTAGGG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATTCTACAGATGGAAAACCGCCACAAATAAACAATAAGAGTAGGG  676

seq1  GGATCTTAACAAAATGACCATGATGGGAATGTTCTTTGTCAACTTGATTT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTAACAAAATGACCATGATGGGAATGTTCTTTGTCAACTTGATTT  726

seq1  GGTTTAGAAATGCCTAGGACATTAGTATAATCTGGGTGTTGGAAACGGTG  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGAAATGCCTAGGACATTAGTATAATCTGGGTGTTGGAAACGGTG  776

seq1  TTTCCAGAGATAACTACATTGTAAGAACTTTGACTTATTGAATTGATTCA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAGATAACTACATTGTAAGAACTTTGACTTATTGAATTGATTCA  826

seq1  TTTGATGATGTGTTCCTATTATGGCAATATTATTGAGAGATGGTGAAAAA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGATGTGTTCCTATTATGGCAATATTATTGAGAGATGGTGAAAAA  876

seq1  CCAGAGGTATGGAAAAACCAGAGGTTAGAGGAAGTGGTTCCCTATGGAGT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGTATGGAAAAACCAGAGGTTAGAGGAAGTGGTTCCCTATGGAGT  926

seq1  TTCCTTGGTGGTCATTGTTAGCTTTGCCCTCTTTCTGTGCCCTAATTTCT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGGTGGTCATTGTTAGCTTTGCCCTCTTTCTGTGCCCTAATTTCT  976

seq1  CTGTTTTTATGTAAACCTTGATGTAGGACAATCTTCCACCCTATTAATCT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTATGTAAACCTTGATGTAGGACAATCTTCCACCCTATTAATCT  1026

seq1  ACCACCATGATGGCCCACCAAAGTTCACAAGGCTCAGTAAGCATTTCCTA  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCATGATGGCCCACCAAAGTTCACAAGGCTCAGTAAGCATTTCCTA  1076

seq1  AACCCTTTGAAACCATAAATCAAAATGGATGTTTCCCTATCAGATATTGT  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTTGAAACCATAAATCAAAATGGATGTTTCCCTATCAGATATTGT  1126

seq1  TTATATCAGTTATTTTAAGCCCGATAATATAAAAGTAACTAACATATAAC  1185
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCAGTTATTTTAAGCCCGATAATATAAAAGTAACTAACATATAAC  1176

seq1  TAACTAAGATATAATTATGCCTTAAAGACAGGAGGGAATGAATTC  1230
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAGATATAATTATGCCTTAAAGACAGGAGGGAATGAATTC  1221


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