BAC Information

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BAC

Clone NameB6Ng01-043I13
Chromosome8 (Build37)
Map Location 42,395,669 - 42,396,440
singlet/doubletsinglet
Overlap genePcm1
Upstream gene2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2, Pdgfrl, Mtus1, Fgl1
Downstream geneAsah1, Frg1, LOC100039376, Gm1815, LOC671994, Zfp353, EG620772
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043I13.bB6Ng01-043I13.g
ACCDH869567DH869568
length1,251770
definitionDH869567|Mus musculus domesticus DNA, BAC clone: B6Ng01-043I13, 5' end.DH869568|Mus musculus domesticus DNA, BAC clone: B6Ng01-043I13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgtgccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagatccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagtagagtcacgccagatattttgaaacctgg
atgaaatggacaatttctggacagatacagggtaccaaagttgaatcagg
atcaagttgaccatctaaacagtcccatatcacctaaggaaatgaagcag
ttattaatagtctcccagcctaaaaggccaggaacagatgggttagtggc
agagtctacagaaccctcaaggagataatcatctctcaaccaatttccaa
aaagaggtgagggacctcaccacctctttttgagccgattcttgtaccaa
ccgtgaagattccctacgagatagagatactcagcacatctctctagtga
t
gaattcttcagaagattagttagaccaaagagtggtcaagtcagaaaact
tttaaatatataagtacaaaataaatcaagtctgtaaaagaaagacctgg
acaaaagaaaatcatccaggaaaaaagtaaaatttaatgtattctactta
gacaagtttatgaatcaactagaaagatcggggaaaaatgataagatact
tttatatattagatatttgaaaatgacccgtttacaggtacatttataat
ttttgtatagcaaatacttaaataattcaagcatctggagatctctaaga
aagaataaaataatgaagtagcttatagataaagagttatgaaataacat
tgttgtgaattttaccactattgtaatgttaacaaaagtattctgaagat
gatatttctccaaaaggatattttatctttttttggggtaaggataatct
gtttagaaactattgaggattttcttttcttttttttactcctaaacacg
tgctgaagacaatacctcctacactgtccctttttcttattcttgttcta
tactatgctataaatcatatgctgctataaaaaactgtctaaaaattcca
tagtttacactttgttgtgtttgtgcatatgtagtgcatgtacatgtgtg
tgtggtggtggtggtgtagtagcagtagcagtagcagtagcagtagcagt
agcagtagtatgtgtttgtgtgcttgtgtatggaggccaagagtggctgg
aatgccttctctgattgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_42395669_42396440
seq2: B6Ng01-043I13.g_69_838

seq1  GAATTCTTCAGAAGATTAGTTAGACCAAAGAGTGGTCAAGTCAGAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAAGATTAGTTAGACCAAAGAGTGGTCAAGTCAGAAAACT  50

seq1  TTTAAATATATAAGTACAAAATAAATCAAGTCTGTAAAAGAAAGACCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATATAAGTACAAAATAAATCAAGTCTGTAAAAGAAAGACCTGG  100

seq1  ACAAAAGAAAATCATCCAGGAAAAAAGTAAAATTTAATGTATTCTACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGAAAATCATCCAGGAAAAAAGTAAAATTTAATGTATTCTACTTA  150

seq1  GACAAGTTTATGAATCAACTAGAAAGATCGGGGAAAAATGATAAGATACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTTTATGAATCAACTAGAAAGATCGGGGAAAAATGATAAGATACT  200

seq1  TTTATATATTAGATATTTGAAAATGACCCGTTTACAGGTACATTTATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATTAGATATTTGAAAATGACCCGTTTACAGGTACATTTATAAT  250

seq1  TTTTGTATAGCAAATACTTAAATAATTCAAGCATCTGGAGATCTCTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATAGCAAATACTTAAATAATTCAAGCATCTGGAGATCTCTAAGA  300

seq1  AAGAATAAAATAATGAAGTAGCTTATAGATAAAGAGTTATGAAATAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAAATAATGAAGTAGCTTATAGATAAAGAGTTATGAAATAACAT  350

seq1  TGTTGTGAATTTTACCACTATTGTAATGTTAACAAAAGTATTCTGAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGAATTTTACCACTATTGTAATGTTAACAAAAGTATTCTGAAGAT  400

seq1  GATATTTCTCCAAAAGGATATTTTATCTTTTTTTGGGGTAAGGATAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTCTCCAAAAGGATATTTTATCTTTTTTTGGGGTAAGGATAATCT  450

seq1  GTTTAGAAACTATTGAGGATTTTCTTTTCTTTTTTTTACTCCTAAACACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAAACTATTGAGGATTTTCTTTTCTTTTTTTTACTCCTAAACACG  500

seq1  TGCTGAAGACAATACCTCCTACACTGTCCCTTTTTCTTATTCTTGTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGACAATACCTCCTACACTGTCCCTTTTTCTTATTCTTGTTCTA  550

seq1  TACTATGCTATAAATCATATGCTGCTATAAAAAACTGTCTAAAAATTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGCTATAAATCATATGCTGCTATAAAAAACTGTCTAAAAATTCCA  600

seq1  TAGTTTACACTTTGTTGTGTTTGTGCATATGTAGTGCATGTACATGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTACACTTTGTTGTGTTTGTGCATATGTAGTGCATGTACATGTGTG  650

seq1  TGTGGTGGTGGTGGTGTAGTAGCAGTAGCAGTAGCAGTAGCAGTAGCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGTGGTGGTGTAGTAGCAGTAGCAGTAGCAGTAGCAGTAGCAGT  700

seq1  AGCAGTAGTATGTGTTTGTGTGCTTGTGTATGGAGGCCAGGAGTTGGCAT  750
      ||||||||||||||||||||||||||||||||||||||| ||| |||| |
seq2  AGCAGTAGTATGTGTTTGTGTGCTTGTGTATGGAGGCCAAGAG-TGGC-T  748

seq1  GGAATGTCTTCCTTGATTGCTT  772
      |||||| ||||  |||||||||
seq2  GGAATGCCTTCTCTGATTGCTT  770