BAC Information

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BAC

Clone NameB6Ng01-043J16
Chromosome8 (Build37)
Map Location 31,441,761 - 31,442,941
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628189
Downstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043J16.bB6Ng01-043J16.g
ACCDH869615DH869616
length1,2031,189
definitionDH869615|Mus musculus domesticus DNA, BAC clone: B6Ng01-043J16, 5' end.DH869616|Mus musculus domesticus DNA, BAC clone: B6Ng01-043J16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttctgagttctttatatatattggatattagtcccc
tgtctgatttgggataggtaaagatcctttcccaatccgttggtggcctt
tttgtcttattgacggtgtcttttgctttgcagaagctttgcaattgtat
gaggtcccaattatcgattcttgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtacacatgtcttcgaggcttttccctact
ttctcctctacaagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagatagaaatggatcaattcaca
ttcttctacatgataaccgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtaggttcatctctgggtcttcaattctgttccattggt
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgtagtacagttttaggtctggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctattctcggtttttttgttattccagatg
aatctgccgattgccctttctaattcgttgaagaattgagttggaatttt
gatgggaatttgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttctttagagacttgaagttcttatcat
acagatctttcacttccttagttagagtcacgccaaggtatttatattat
ttgtgactatgagacggtgttgtttccctaatttctttctcagctgttta
tcctttgtgtacagaagccattgacttgtttgcgtttattttatatcagc
tacttcatgaagctgttatcaggctagattctctgtggcgattttaggtc
actcatattacactatcatattcgctcgcaaaaggaattttactcttcgt
ccattgtatcctctggatccctttgtgcgcttaatggctccgggcgtgga
ctc
gaattctctcctgtgaagcacccatcaaatccaagcagaaagtacttgct
tatccctataacacccatgccacccttcctccaatggtcatatcatgctt
ggaatattgctactgaatcatgcagagctacttctgggaaagtgtggata
tctttactcattcagcagcctggctagtacctgccaggaccatgtgagct
agccagctggaaggcagctttaagctcagttccagcttgatttctctgtc
aagaaaacagtacagtagtgtgatatcttcagtaatcttgtcttactatt
tctggtatgcaaccaggaccaggagcaatagcctacattgaacccataga
ggctccccaaaccaacaacctatagggaagtatcccacacttggtactgg
gatttttctctaatagtttctgggagcaaaattatccatccaaattggtt
attccctttcaaagtctgttttattatatttgaattggcttatacatcag
taggttcctatgtagaattttcacgtttccttaattttgattagccctcc
tctcttcccatcccctacatctcaccctcctatatcatccctgtttaagg
tgtatgtttgatttgaaatatctgtagaattcagaacactagaaatacac
catgagtaagaagcctctaagaagaaatagaacatatgtgatatgaaagt
agaggagcgagggactgaaccccaaagtgcctgagcagaagcacctgcta
gaaaagaaccactagtaatacacaagctagcattcacgatacattaaaac
acgtctgtttagctctgctcgccagtaagtagataactaatgatctcctt
agctggaagacaaaaagccattttttattgttgtgatagccaaaagtcaa
ggtcaaaacccaccaaatcagatatgcattgtagccataacctggacatc
tgatgatcctttcagatagtagttctttacattcaagggtagaaaaacac
aggatcactacaaacatacacattcctgtgattgtattataagatttgct
gagccagacttagtattaatgcattctttttccactatctctttactatt
ggagctgataatcaagtcttcacatcagagcatggctttaatatagcctt
cttaaatactattcactgcactggagttccaattgcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_31441761_31442941
seq2: B6Ng01-043J16.g_155_1256

seq1  TCATATCATGCTTGGAATATTGCTACTGAATCATGCAGAGCTACTTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCATGCTTGGAATATTGCTACTGAATCATGCAGAGCTACTTCTGG  50

seq1  GAAAGTGTGGATATCTTTACTCATTCAGCAGCCTGGCTAGTACCTGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTGGATATCTTTACTCATTCAGCAGCCTGGCTAGTACCTGCCAG  100

seq1  GACCATGTGAGCTAGCCAGCTGGAAGGCAGCTTTAAGCTCAGTTCCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGTGAGCTAGCCAGCTGGAAGGCAGCTTTAAGCTCAGTTCCAGCT  150

seq1  TGATTTCTCTGTCAAGAAAACAGTACAGTAGTGTGATATCTTCAGTAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTCTGTCAAGAAAACAGTACAGTAGTGTGATATCTTCAGTAATC  200

seq1  TTGTCTTACTATTTCTGGTATGCAACCAGGACCAGGAGCAATAGCCTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTACTATTTCTGGTATGCAACCAGGACCAGGAGCAATAGCCTACA  250

seq1  TTGAACCCATAGAGGCTCCCCAAACCAACAACCTATAGGGAAGTATCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCCATAGAGGCTCCCCAAACCAACAACCTATAGGGAAGTATCCCA  300

seq1  CACTTGGTACTGGGATTTTTCTCTAATAGTTTCTGGGAGCAAAATTATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGTACTGGGATTTTTCTCTAATAGTTTCTGGGAGCAAAATTATCC  350

seq1  ATCCAAATTGGTTATTCCCTTTCAAAGTCTGTTTTATTATATTTGAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAATTGGTTATTCCCTTTCAAAGTCTGTTTTATTATATTTGAATTG  400

seq1  GCTTATACATCAGTAGGTTCCTATGTAGAATTTTCACGTTTCCTTAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATACATCAGTAGGTTCCTATGTAGAATTTTCACGTTTCCTTAATTT  450

seq1  TGATTAGCCCTCCTCTCTTCCCATCCCCTACATCTCACCCTCCTATATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGCCCTCCTCTCTTCCCATCCCCTACATCTCACCCTCCTATATCA  500

seq1  TCCCTGTTTAAGGTGTATGTTTGATTTGAAATATCTGTAGAATTCAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTTAAGGTGTATGTTTGATTTGAAATATCTGTAGAATTCAGAAC  550

seq1  ACTAGAAATACACCATGAGTAAGAAGCCTCTAAGAAGAAATAGAACATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAATACACCATGAGTAAGAAGCCTCTAAGAAGAAATAGAACATAT  600

seq1  GTGATATGAAAGTAGAGGAGCGAGGGACTGAACCCCAAAGTGCCTGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATGAAAGTAGAGGAGCGAGGGACTGAACCCCAAAGTGCCTGAGCA  650

seq1  GAAGCACCTGCTAGAAAAGAACCACTAGTAATACACAAGCTAGCATTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAAGCACCTGCTAGAAAAGAACCACTAGTAATACACAAGCTAGCATTCAC  700

seq1  GATACATTAAAACACGTCTGTTTAGCTCTGCTCGCCAGTAAGTAGATAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATTAAAACACGTCTGTTTAGCTCTGCTCGCCAGTAAGTAGATAAC  750

seq1  TAATGATCTCCTTAGCTGGAAGACAAAAAGCCATTTTTTATTGTTGTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATCTCCTTAGCTGGAAGACAAAAAGCCATTTTTTATTGTTGTGAT  800

seq1  AGCCAAAAGTCAAGGTCAAAACCCACCAAATCAGATATGCATTGTAGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAAGTCAAGGTCAAAACCCACCAAATCAGATATGCATTGTAGCCA  850

seq1  TAACCTGGACATCTGATGATCCTTTCAGGATAGTAGTTCTTTACATTCAA  900
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAACCTGGACATCTGATGATCCTTTCA-GATAGTAGTTCTTTACATTCAA  899

seq1  GGGTAGAAAAACACAAGATCACTACAAACATACACATTCCTGTGAATTGG  950
      ||||||||||||||| |||||||||||||||||||||||||||||  | |
seq2  GGGTAGAAAAACACAGGATCACTACAAACATACACATTCCTGTGA--TTG  947

seq1  TATTATAAGAATTTGCTGAGGCAAGACTTAGTAATAATGCATTCTGTATT  1000
      ||||||||| ||||||||| || |||||||||| ||||||||||| | ||
seq2  TATTATAAG-ATTTGCTGA-GCCAGACTTAGTATTAATGCATTCT-TTTT  994

seq1  CCACTATCTCCTTTACTATTGGAGCCTGATACATCAAGTC-TCACATCAA  1049
      ||||||||| |||||||||||||| |||||| |||||||| |||||||| 
seq2  CCACTATCT-CTTTACTATTGGAG-CTGATA-ATCAAGTCTTCACATCAG  1041

seq1  AGGCATAGCTTATAATATACCCTACATAAATACTATCCACTG-ACTAGGA  1098
      | |||| |||| ||||||| ||| | |||||||||| ||||| ||| |||
seq2  A-GCATGGCTT-TAATATAGCCTTCTTAAATACTATTCACTGCACT-GGA  1088

seq1  TGTTTACATAGCATTAAATTACATAAATTTTTAAAATTACTTTAAGGATT  1148
       |||   || ||||                                    
seq2  -GTTCCAATTGCATA-----------------------------------  1102

seq1  TTAAATGTAGATGGTAATAGATCCAATTGCATA  1181
                                       
seq2  ---------------------------------  1102