BAC Information

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BAC

Clone NameB6Ng01-044O05
Chromosome8 (Build37)
Map Location 75,959,059 - 75,960,197
singlet/doubletsinglet
Overlap genenone
Upstream geneCalr3, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3, Large, LOC100039001
Downstream geneLOC666134, Crry-ps, LOC666146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044O05.bB6Ng01-044O05.g
ACCDH870511DH870512
length1,1291,180
definitionDH870511|Mus musculus domesticus DNA, BAC clone: B6Ng01-044O05, 5' end.DH870512|Mus musculus domesticus DNA, BAC clone: B6Ng01-044O05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttgggcttgagaaaggaatggaaatgggaaacagtgaagaat
gaaatgaacagtaattcttcccattgacaacctcttgcccacctgcatag
ttttattcctttctcttcaaattctgctacctgcattgtaaatcaggaag
caattggtaccttaaagaatgaatgaatgaggatagatgctaccatttca
ttgagaaattcctttttctattactattccatttaagaagcaataaattg
ttccttctcagagtctagatcataatgtcctttttccaagtatttcaaat
tatcatttttttacttctctgcctcctctgttacactctaatatcattat
gagcagatgtaataccacattatcctgtatcatcattaatcatttctcag
tttagtgtagagccaggcataggagattaaccaaaagaactttgttcagt
tccagtgacaatattttgaacaaatactaggagctcctagttttgagtgc
cagcaatatcctaggcactgcaatttacatttgaggaacttttttctttc
ttttcttctttcctttgattcaggttttatagcattatgatgagaaaaga
tacataatttcaatttatctgaatttgttaacatttaaaaacatgttttt
actaaatagacttacatcacattcttctttcccttttgtactccaactcc
tcccagaaccccccttcaaaacctgtaataccttttgttgtttatcatat
tctttaaaatttataaatgattgtaacaataaaatgagtattataaaagt
tgtttgatataaaacaatcaattgaacagtcttatgtagatgtttgtcta
cagcaatactgaaaatacatgtttttctcaatataaattttaaatagttc
caaatgtattaattgtatgatattttaaaatatatattactattagggtt
ttttttaaatgaacataagatcgtcttttgtttgtttgtttggtttggtt
ttagtagagcttaaaatcttggcttactgtggtataaacacaaaatagaa
cagttttgaaatttgagttcattgtaacaaggctgttcttgagtgtccct
ccataccaaagattaactctttaagttag
gaattcttttgtttctccatctatggtaattgagagtttgtccgggtata
gtagcctgggctggcatttgtgttctcttagtgtctatataacatctgtc
caggcttttctggctttcatagtctctagtcaaaagtctggtgtaattct
gatagggctgcctttatatgttacttgacctttctcccttactgctttta
atattctatctttatttagtacatttgttgttctgattattatgtgtctg
gaggaatttcttttctggtccagtcttttttgagttctgtaggcttcctg
tatgttcatgggcatttctttctttagatttgggaagttttcttctataa
ttttgttgaagatatttgctggccctttaagatgaaaatcttcattctca
tcaactcctattatcggtaggtttggtcttctcattgtgccctgtatttc
ctggatgttttgagttaggatccttctgcattttgtattttctttgattg
ttgtgccgatgttctctatggaatcttctgtacctgagattttctcttct
atctcttgtattctgttgctgatgctcgcatctatggttccagatttctt
tcctagggtttctatctccagcgttgcctcactttgggttttctttattg
tgtctacttccctttttagttctagtattgttttgttcatttccatcacc
tgtttggatttgttttcctgtgtttctttaaggactttgtcttagtcagg
gtttctattcctgcacaaacttcatgaccaagaagcaagttggggaggaa
agggtttattcggcttacactttcatgctgctgttcatcaccaaaggaag
tcaggactggaactcaaggaggtcagggagcaggagctgatgcagaggcc
atggagggatgttctttactggcttgcttcacctggcttgctcagcctgc
tttctatgacccaagactaccagccctggagatggtccaccacaagggcc
ttcccctgataactaattgagaaatgccttacaggtggatctatggaggc
atttctccacctgagctccttctcctggatatccagctggccaggtgaac
caaacaggcagtacaaactctaccgatgtgtggttcttgtattcttaagg
ccgtgacctcatgacggcatctcccgtgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_75959059_75960197
seq2: B6Ng01-044O05.b_45_1173

seq1  GAATTCCTTTGGGCTTGAGAAAGGAATGGAAATGGGAAACAGTGAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGGGCTTGAGAAAGGAATGGAAATGGGAAACAGTGAAGAAT  50

seq1  GAAATGAACAGTAATTCTTCCCATTGACAACCTCTTGCCCACCTGCATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAACAGTAATTCTTCCCATTGACAACCTCTTGCCCACCTGCATAG  100

seq1  TTTTATTCCTTTCTCTTCAAATTCTGCTACCTGCATTGTAAATCAGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCCTTTCTCTTCAAATTCTGCTACCTGCATTGTAAATCAGGAAG  150

seq1  CAATTGGTACCTTAAAGAATGAATGAATGAGGATAGATGCTACCATTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGTACCTTAAAGAATGAATGAATGAGGATAGATGCTACCATTTCA  200

seq1  TTGAGAAATTCCTTTTTCTATTACTATTCCATTTAAGAAGCAATAAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAATTCCTTTTTCTATTACTATTCCATTTAAGAAGCAATAAATTG  250

seq1  TTCCTTCTCAGAGTCTAGATCATAATGTCCTTTTTCCAAGTATTTCAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTCAGAGTCTAGATCATAATGTCCTTTTTCCAAGTATTTCAAAT  300

seq1  TATCATTTTTTTACTTCTCTGCCTCCTCTGTTACACTCTAATATCATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTTTTTACTTCTCTGCCTCCTCTGTTACACTCTAATATCATTAT  350

seq1  GAGCAGATGTAATACCACATTATCCTGTATCATCATTAATCATTTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGATGTAATACCACATTATCCTGTATCATCATTAATCATTTCTCAG  400

seq1  TTTAGTGTAGAGCCAGGCATAGGAGATTAACCAAAAGAACTTTGTTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGTAGAGCCAGGCATAGGAGATTAACCAAAAGAACTTTGTTCAGT  450

seq1  TCCAGTGACAATATTTTGAACAAATACTAGGAGCTCCTAGTTTTGAGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGACAATATTTTGAACAAATACTAGGAGCTCCTAGTTTTGAGTGC  500

seq1  CAGCAATATCCTAGGCACTGCAATTTACATTTGAGGAACTTTTTTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATATCCTAGGCACTGCAATTTACATTTGAGGAACTTTTTTCTTTC  550

seq1  TTTTCTTCTTTCCTTTGATTCAGGTTTTATAGCATTATGATGAGAAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTTTCCTTTGATTCAGGTTTTATAGCATTATGATGAGAAAAGA  600

seq1  TACATAATTTCAATTTATCTGAATTTGTTAACATTTAAAAACATGTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAATTTCAATTTATCTGAATTTGTTAACATTTAAAAACATGTTTTT  650

seq1  ACTAAATAGACTTACATCACATTCTTCTTTCCCTTTTGTACTCCAACTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATAGACTTACATCACATTCTTCTTTCCCTTTTGTACTCCAACTCC  700

seq1  TCCCAGAACCCCCCTTCAAAACCTGTAATACCTTTTGTTGTTTATCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAACCCCCCTTCAAAACCTGTAATACCTTTTGTTGTTTATCATAT  750

seq1  TCTTTAAAATTTATAAATGATTGTAACAATAAAATGAGTATTATAAAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAATTTATAAATGATTGTAACAATAAAATGAGTATTATAAAAGT  800

seq1  TGTTTGATATAAAACAATCAATTGAACAGTCTTATGTAGATGTTTGTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATATAAAACAATCAATTGAACAGTCTTATGTAGATGTTTGTCTA  850

seq1  CAGCAATACTGAAAATACATGTTTTTCTCAATATAAATTTTAAATAGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATACTGAAAATACATGTTTTTCTCAATATAAATTTTAAATAGTTC  900

seq1  CAAATGTATTAATTGTATGATATTTTAAAATAATATATTACTATTAGGGT  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  CAAATGTATTAATTGTATGATATTTTAAAAT-ATATATTACTATTAGGG-  948

seq1  TTTTTTTTAAATGAACAT-AGATCGTCTTTTTGTTTGTTTTGTTTGGTTT  999
      |||||||||||||||||| |||||||| ||||||||| ||||||||||||
seq2  TTTTTTTTAAATGAACATAAGATCGTC-TTTTGTTTG-TTTGTTTGGTTT  996

seq1  GGTTTTAGTAGAGCTTAAAATCTTGGCTTACTGTGGTATAAACACAAAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAGTAGAGCTTAAAATCTTGGCTTACTGTGGTATAAACACAAAAT  1046

seq1  AAGAACAGTTTTTGAAAATTGGAGTTCATTGTAACAAGGCTGTTCTTGAG  1099
       |||||||||||   ||||| |||||||||||||||||||||||||||||
seq2  -AGAACAGTTTT--GAAATTTGAGTTCATTGTAACAAGGCTGTTCTTGAG  1093

seq1  TGTCCCTCACATCACCAAAGGATTTTACCTCTTT-AGTTAG  1139
      |||||||| ||| |||||||    ||| |||||| ||||||
seq2  TGTCCCTC-CAT-ACCAAAG---ATTAACTCTTTAAGTTAG  1129