BAC Information

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BAC

Clone NameB6Ng01-044P22
Chromosome8 (Build37)
Map Location 53,032,244 - 53,033,383
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667517, LOC623872
Downstream geneLOC100040220, LOC623935, 1190028D05Rik, LOC676688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044P22.bB6Ng01-044P22.g
ACCDH870584DH870585
length1,1341,174
definitionDH870584|Mus musculus domesticus DNA, BAC clone: B6Ng01-044P22, 5' end.DH870585|Mus musculus domesticus DNA, BAC clone: B6Ng01-044P22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaaacatattttttgcttaaaatttccatctctgaatgagaat
gaaacatggtctagttatgatttaaaatatgttataaaaattaaaattaa
taaacaaggaaataaatagataaatgaagaaaccacttaattttaaagaa
agcaaagtatgcacatatgtatatatttataaatgggtatatattttgaa
ttttaagaaataacaaagaaggtaaaagagacattaattaactctactta
tagctgaatgtatgggtgaaaggatgaggctgaccacttagtattacata
ctttgttgcccataatcccttaaattactcttttctatttagttaacaag
aatgcaaattttatttcgcaatccctttagtattaaaatgtttgtttagt
tcagagtagattatatttgcacaaaggttgatttttttttcattttctta
tagaacttgtgacattttcaaatcacagttttttcttgaaaatatctttc
aactgatagctgcaagaatgtatacccagggtgtttgggagagactttac
aatccaacttagcttcagaactaggcagccagaaatgctgtgcctgttcc
ttaagctctggctgggttactttgtgtagatacaaaatagagttggtaat
agtcactctttgaaagctcatttttcaaacgtaagtgaatccagtgaaat
aaggatgatcttgtaagcacaacacggatttcaagttacccatacctcat
ctaagatattctacagctagagttaaaactactgtttcaaatacaggtag
ttaaattctgaagcctgaccttaacatatataagttattttcttgttacc
taatcagctatagcactcacaaatgtatgtgtctttttcatacctcaaac
atacttctagaaaacatacttattagtgttaagatctatgctgcctgcat
tctctagctactttatgaatatacccataatatcagccagtctattatca
cccgtttctcataaagtatagaccatgaaataattccagttgtttggatt
cccagtaacgtcatttttcagtagatgccattaaaaagaagaagaaacac
acgtcttaaattatttttttgaatgagccctgta
gccaatacctaaaatgattaaaaacaatctacagcaaaccagtatccaaa
ggataactacacaaaggataaacaggctgagaaagaaattagtgaaccaa
cacccttctcaatagtcacaaataatatgaaatactttggcgtgactcta
aaaaaggaagtgaaagatctgtatgataagaacttcaagtctgtgaagaa
agaaaataaagaagatctcagaagatgggaagatctcccatactcatgga
ctggcaggatcaatatagtaaaaatggctatcttgctaagagcaatctat
agattcaatgcaatacgcacatcaaaattccaactcaattcttcaacgaa
ttagaaaggacaatatgcaaattcatcttgaataacaaaaaaaaaaaaaa
aaaactaggatagcaaaaactcttctcaatgaaaaaaaaaaagtggtgga
atcaccatgcctgacctaaagctgttctacagagcaattttgataaaaac
tgcatggtactggcatagcaacagacaagtagacccattggaatagaatt
gaagacccagaaatgaacccacacacctatggtcacttgatctttgacaa
gggagctaaaaccatccagtggaaaaaagacagcattgtcaacaaatggt
gctggcacaactgctggttatcctgtagagtaatgtgaattgatccattt
ctagctccttgcacaaaggtcaaatctaagtggataaaggaactccacat
aaaaccagagacagtgaaacttatagaggagaaagtgggggaaagcctcg
aaaatatggacagaggggaaaaattcctgaatagaacagcaatggcttct
gctgtaagatcacaaattgacaaatgggctattataaaattgcaaagctt
ctgtaaggccaaagaggaaaaggccaccaacagattggaaaggatcttta
ctatctacatcatatagggacaatatcatatatataagactcagagtgac
tcagaaatcaatacccataaaaatagctcaaatctaacaagattctgact
gagaaatcgatgctgaaagcactgtaaatgttcagttcttaactaagatg
caagtcaaacatgctgatcactcaatcgaatgctaagatcaaattccatt
gacgaatgctggtagaatctggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53032244_53033383
seq2: B6Ng01-044P22.b_43_1176 (reverse)

seq1  TACAGGGCTCATTCCAAAATATAATTTAAGACGTTGTGTTTCTTCTTCTT  50
      |||||||||||||| |||| ||||||||||||| ||||||||||||||||
seq2  TACAGGGCTCATTCAAAAAAATAATTTAAGACG-TGTGTTTCTTCTTCTT  49

seq1  TTTAATGGCATCTACTGAAAAATGACTGTTACTGAGAATCCAAACAACTG  100
      |||||||||||||||||||||||||| ||||||| |||||||||||||||
seq2  TTTAATGGCATCTACTGAAAAATGAC-GTTACTGGGAATCCAAACAACTG  98

seq1  GAATTTATTTCATGGTCTATAACTTTATGAGAAACGGGTGATAATAGACT  150
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAA-TTATTTCATGGTCTAT-ACTTTATGAGAAACGGGTGATAATAGACT  146

seq1  GGCTGATATTATGGGTATATTCATAAAGTAGCTAGGAGAATGCAGGCAGC  200
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGCTGATATTATGGGTATATTCATAAAGTAGCTA-GAGAATGCAGGCAGC  195

seq1  ATAGATCTTAACACTAATAAGTATGTTTTTCTAGAAGTATGTTTGAGGTA  250
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATAGATCTTAACACTAATAAGTATG-TTTTCTAGAAGTATGTTTGAGGTA  244

seq1  TGAAAAAGACACATACATTTGTGAGTGCTATAGCTGATTAGGTAACAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGACACATACATTTGTGAGTGCTATAGCTGATTAGGTAACAAGA  294

seq1  AAATAACTTATATATGTTAAGGTCAGGCTTCAGAATTTAACTACCTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTTATATATGTTAAGGTCAGGCTTCAGAATTTAACTACCTGTAT  344

seq1  TTGAAACAGTAGTTTTAACTCTAGCTGTAGAATATCTTAGATGAGGTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACAGTAGTTTTAACTCTAGCTGTAGAATATCTTAGATGAGGTATG  394

seq1  GGTAACTTGAAATCCGTGTTGTGCTTACAAGATCATCCTTATTTCACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACTTGAAATCCGTGTTGTGCTTACAAGATCATCCTTATTTCACTGG  444

seq1  ATTCACTTACGTTTGAAAAATGAGCTTTCAAAGAGTGACTATTACCAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTTACGTTTGAAAAATGAGCTTTCAAAGAGTGACTATTACCAACT  494

seq1  CTATTTTGTATCTACACAAAGTAACCCAGCCAGAGCTTAAGGAACAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTGTATCTACACAAAGTAACCCAGCCAGAGCTTAAGGAACAGGCA  544

seq1  CAGCATTTCTGGCTGCCTAGTTCTGAAGCTAAGTTGGATTGTAAAGTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTCTGGCTGCCTAGTTCTGAAGCTAAGTTGGATTGTAAAGTCTC  594

seq1  TCCCAAACACCCTGGGTATACATTCTTGCAGCTATCAGTTGAAAGATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACACCCTGGGTATACATTCTTGCAGCTATCAGTTGAAAGATATT  644

seq1  TTCAAGAAAAAACTGTGATTTGAAAATGTCACAAGTTCTATAAGAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAAAAAACTGTGATTTGAAAATGTCACAAGTTCTATAAGAAAATG  694

seq1  AAAAAAAAATCAACCTTTGTGCAAATATAATCTACTCTGAACTAAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATCAACCTTTGTGCAAATATAATCTACTCTGAACTAAACAAA  744

seq1  CATTTTAATACTAAAGGGATTGCGAAATAAAATTTGCATTCTTGTTAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAATACTAAAGGGATTGCGAAATAAAATTTGCATTCTTGTTAACT  794

seq1  AAATAGAAAAGAGTAATTTAAGGGATTATGGGCAACAAAGTATGTAATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAAAGAGTAATTTAAGGGATTATGGGCAACAAAGTATGTAATAC  844

seq1  TAAGTGGTCAGCCTCATCCTTTCACCCATACATTCAGCTATAAGTAGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGTCAGCCTCATCCTTTCACCCATACATTCAGCTATAAGTAGAGT  894

seq1  TAATTAATGTCTCTTTTACCTTCTTTGTTATTTCTTAAAATTCAAAATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATGTCTCTTTTACCTTCTTTGTTATTTCTTAAAATTCAAAATAT  944

seq1  ATACCCATTTATAAATATATACATATGTGCATACTTTGCTTTCTTTAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCATTTATAAATATATACATATGTGCATACTTTGCTTTCTTTAAAA  994

seq1  TTAAGTGGTTTCTTCATTTATCTATTTATTTCCTTGTTTATTAATTTTAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGGTTTCTTCATTTATCTATTTATTTCCTTGTTTATTAATTTTAA  1044

seq1  TTTTTATAACATATTTTAAATCATAACTAGACCATGTTTCATTCTCATTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAACATATTTTAAATCATAACTAGACCATGTTTCATTCTCATTC  1094

seq1  AGAGATGGAAATTTTAAGCAAAAAATATGTTTTGGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGAAATTTTAAGCAAAAAATATGTTTTGGAATTC  1134