BAC Information

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BAC

Clone NameB6Ng01-045F02
Chromosome8 (Build37)
Map Location 32,856,820 - 32,857,894
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731
Downstream geneLOC100041340, Nrg1, 2010007E15Rik, EG666589, EG546052
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045F02.bB6Ng01-045F02.g
ACCDH870806DH870807
length1,2161,048
definitionDH870806|Mus musculus domesticus DNA, BAC clone: B6Ng01-045F02, 5' end.DH870807|Mus musculus domesticus DNA, BAC clone: B6Ng01-045F02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaagcctgataaacagcttcaatgaagtagctggatataaaat
taactcaaacaagtcaattgcctttctgtacacaaaggataaacaggctg
agagaaagaaattagagaaacaacacccttctcaatagtccatataaaat
accttggcttgactctaactaaggaagtgaaagatctgtatgataagaac
ttcaagtctctgaagaaagaaattaaagatctcagaagatggaaagatct
cccatgctcatggattggcaggccaacattgtaaaaatggctatcttgcc
aaaagcaatctacagattcaatgcaatccccatcaaaattccaactcaat
tcttcaacaaattagaaagggcaatcagcagattcatctggaataacaaa
aaacctaggatagcaaaaactcttctcaaggataaaagaacctctggtgg
aatcaccatgcctgacctaaagctgtactacagagcaattgtgataaaaa
ctgcatggtattggtatagtgacagacaagtagaccaatggaacagaatt
gaagacccagagatgaacccaaacctatggtcacttgatctttgacaagg
gagctaaaaccatccagtggaaaaaagacagcattttcaacaaatggtgc
tggcacaactggcggttatcatgtagaaaaatgcaaattgatccatttct
atctccttgtactaaggtcaaatctaagtggattaaggaactccacataa
aaccagagacactgaaacttatagaggagaaagtggggaaaagccttgaa
gatatgggtacagggggaaatttcctgaatagaacagcaatggcttgtgc
ttgtaggatcgagaattgacaaatgggacttcatgaaactccaaagcttc
tgcaaggcaaaagacaccgtcaatagacaaaaagaccaccacagtttggg
aaaggatctttacttatcccaaatcggatagcggactaatatctaatata
tataagactcagtgtgactcagaaatcaataccccagtaaaatgggctca
gagctgacagaatctcattgagaatacggatgctgaaaaaccctgaaaat
gttcacatctatcatcagattgcaatcaacacttgaatccacctccacag
tcgaatgctaatcaatctgtaagcgaactggcagaagctgtgacgacgta
tgtacactctcctcaa
gaattcactctgtaggccaggctggccttgaactcagaattcacctgcct
ctgcctcccaagtgctgggattaaaggcctgcgccaccacgcttgatgct
ccccctcttgtttactgtgagtgacaaacatcatattgataagctaaatt
gtcatgaatggtttaaactcactcaaaagttgcctctggcatctgggttg
tttctccctcatgtcaaaatgaacatgcttgtctctaagaatcctccaag
accctttgttccagggaagggctattcactctcaaacacataacagagag
agaagagaacagcaaaacagtccatagtaaagagaacaaaggtcagccat
ttccaacagaggttgctattatctgcttcatggtacaaaagtgcttccag
tcagactaagagctgggactttggtcttaggaaggtaaaccatagagaga
aagctcaacccagaatttcctttgtttctatgggatgactgctaatgcct
aacttgatgatgggagatgaaataggctaggcaaaaaaaccaaaacaaaa
caaaacaaaacaaaacaaaaaaaacactactaagtgattaacatgtccaa
aagcacacaaaatgaaggcagacatgccaaagtttcattctgcttttcat
tatcttgtagcttcaagtaaaaaaaaaacaaaaacaaacaaacaaacaaa
aaaacccaatgcttctaggcgaaagtaactgggtgtagatgctgtattag
tcaggggtctctagagcagggttctaaacctgtggtcataacccctttgg
gggttgaatgaccccttcacaggagttgcccaagactttcctgttgtatc
agacatttacattacatttcatataacagaagcaaattacagttatgaag
tagcacgaaacatgatttgatggtgtgggtcacacaacatgaaactgcag
taaagatcagagctatgaagtgagactcactgctctgtctctgtaagatg
aggcccatgagcattccctggcagtgactgtcgtgatcaggttcattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32856820_32857894
seq2: B6Ng01-045F02.g_67_1114 (reverse)

seq1  AAATGAGACCTGATCAACGAACATGTCAAACTGCACAGGGAAATGCTCAT  50
      |||||| |||||||| ||| ||| |||  ||||| ||||| |||||||||
seq2  AAATGA-ACCTGATC-ACG-ACA-GTC--ACTGC-CAGGG-AATGCTCAT  42

seq1  GGGGCCTCAATCCTATACAGAGAACAAGAGCAGTGAGTCTCAACCTTTCA  100
       ||||||| |||   ||||||||   ||||||||||||||||    ||||
seq2  -GGGCCTC-ATC--TTACAGAGA--CAGAGCAGTGAGTCTCA---CTTCA  83

seq1  TAAGGCTCTGATCCTTTACTGCAGTTTTTCATGTTGTGGTGACCCACAAC  150
      ||  |||||||| |||||||||||  ||||||||||| ||||||||| ||
seq2  TA--GCTCTGAT-CTTTACTGCAG--TTTCATGTTGT-GTGACCCAC-AC  126

seq1  CATCAAATCATGTTTCGTGCTACTTCATAACTGTAATTTGCTTCTGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATCATGTTTCGTGCTACTTCATAACTGTAATTTGCTTCTGTTAT  176

seq1  ATGAATTGTAATGTAAATGTCTGATAC-ACAGGATAGTCTTGGGCAACTC  249
      ||||| ||||||||||||||||||||| |||||| |||||||||||||||
seq2  ATGAAATGTAATGTAAATGTCTGATACAACAGGAAAGTCTTGGGCAACTC  226

seq1  CTGTGAAGGGGTCATTCAACCCCCAAAGGGGTTATGACCCACAGGTTTAG  299
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGTGAAGGGGTCATTCAACCCCCAAAGGGGTTATGA-CCACAGGTTTAG  275

seq1  AACCCTGCTCTAGAGACCCCTGACTAATACAGCATCTACACCCAGTTACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCTCTAGAGACCCCTGACTAATACAGCATCTACACCCAGTTACT  325

seq1  TTCGCCTAGAAGCATTGGGTTTTTTTTGTTTGTTTGTTTGTTTTTGTTTT  399
      ||||||||||||||||||| ||||||||||||||||||||||||||  ||
seq2  TTCGCCTAGAAGCATTGGG-TTTTTTTGTTTGTTTGTTTGTTTTTG--TT  372

seq1  TTTTTTTTACTTGAAGCTACAAGATAATGAAAAGCAGAATGAAACTTTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTACTTGAAGCTACAAGATAATGAAAAGCAGAATGAAACTTTGG  422

seq1  CATGTCTGCCTTCATTTTGTGTGCTTTTGGACATGTTAATCACTTAGTAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGCCTTCATTTTGTGTGCTTTTGGACATGTTAATCACTTAGTAG  472

seq1  TGTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGGTTTTTTTGCCTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGGTTTTTTTGCCTAG  522

seq1  CCTATTTCATCTCCCATCATCAAGTTAGGCATTAGCAGTCATCCCATAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTCATCTCCCATCATCAAGTTAGGCATTAGCAGTCATCCCATAGA  572

seq1  AACAAAGGAAATTCTGGGTTGAGCTTTCTCTCTATGGTTTACCTTCCTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGAAATTCTGGGTTGAGCTTTCTCTCTATGGTTTACCTTCCTAA  622

seq1  GACCAAAGTCCCAGCTCTTAGTCTGACTGGAAGCACTTTTGTACCATGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAAGTCCCAGCTCTTAGTCTGACTGGAAGCACTTTTGTACCATGAA  672

seq1  GCAGATAATAGCAACCTCTGTTGGAAATGGCTGACCTTTGTTCTCTTTAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAATAGCAACCTCTGTTGGAAATGGCTGACCTTTGTTCTCTTTAC  722

seq1  TATGGACTGTTTTGCTGTTCTCTTCTCTCTCTGTTATGTGTTTGAGAGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGACTGTTTTGCTGTTCTCTTCTCTCTCTGTTATGTGTTTGAGAGTG  772

seq1  AATAGCCCTTCCCTGGAACAAAGGGTCTTGGAGGATTCTTAGAGACAAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCCTTCCCTGGAACAAAGGGTCTTGGAGGATTCTTAGAGACAAGC  822

seq1  ATGTTCATTTTGACATGAGGGAGAAACAACCCAGATGCCAGAGGCAACTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATTTTGACATGAGGGAGAAACAACCCAGATGCCAGAGGCAACTT  872

seq1  TTGAGTGAGTTTAAACCATTCATGACAATTTAGCTTATCAATATGATGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGAGTTTAAACCATTCATGACAATTTAGCTTATCAATATGATGTT  922

seq1  TGTCACTCACAGTAAACAAGAGGGGGAGCATCAAGCGTGGTGGCGCAGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTCACAGTAAACAAGAGGGGGAGCATCAAGCGTGGTGGCGCAGGC  972

seq1  CTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGAATTCTGAGTTCAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGAATTCTGAGTTCAAG  1022

seq1  GCCAGCCTGGCCTACAGAGTGAATTC  1075
      ||||||||||||||||||||||||||
seq2  GCCAGCCTGGCCTACAGAGTGAATTC  1048