BAC Information

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BAC

Clone NameB6Ng01-046F02
Chromosome8 (Build37)
Map Location 75,420,970 - 75,519,704
singlet/doubletdoublet
Overlap geneLarge
Upstream geneLOC670453, Zfp617, BC049349, Cyp4f18, LOC666033, Olfr372, Olfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3
Downstream geneLOC100039001, LOC666134, Crry-ps, LOC666146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046F02.bB6Ng01-046F02.g
ACCDH871522DH871523
length2721,032
definitionDH871522|Mus musculus domesticus DNA, BAC clone: B6Ng01-046F02, 5' end.DH871523|Mus musculus domesticus DNA, BAC clone: B6Ng01-046F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,420,970 - 75,421,219)(75,518,645 - 75,519,704)
sequence
tttgtttagctctgtaccccatttttaatggggttatttgaaaaataaaa
cattttcaacagaggaacattgaatgagagcgaggaggggccaaacagcc
cctcttaaagtatgctgctttcttttttgttgctaggtaactggggagga
gtttagcctgaaggttagaagcttgggacattgcctacttgactaaaagc
catgcttctcctgtgggagctgtgtgtgtgtgtgtgtgtgtgtggggggg
tgtgtgtgtgtgtgtgtgtgag
gaattctcatctctcagactgtgcctccaaagagctctagctcaaaagaa
ctatcctgtattcaatctccagtctccttctgtcttcccctctttgttct
agcttctgccactcaccatactatgtgaatcctgctccccaggatcttcc
ttcagttgcttgaaacacctcttaataggccttttcttctatgaaaacca
gcccagtctcagcagggcctagaggtttagagatggcatagaagctatac
agtagaataatggagcctattctgaccttctcatctttcctgtgatgatg
acagtattaattgtttcaggcagatgccttcctgcctgtgcaaacctgac
tgtccagagttcagtttagctcagcttcctgtcctgatggcccacaggga
ggatacactgctccaacagagcctttattccagagcttggacagaaaaga
tagggatgtcgtgggcaggctgcttaagttatgtacttattcagtcccag
tgaggttgacagatgcgggctcttaagagtgtgtttgcctgcacgtgcaa
accagcatgttgaggccagaggttaatgcctggtttctgtctcagttgct
ctccatcatgtaatactaaggcaggatctcttacttgaacccagagctca
ccaatttgctatagggatcctctgtctctgcctcctgcgtactgggatta
cagaaggctaccatgcccacccagcatttatgtgagcaatgaggatccaa
actcatcctcatgtttacacagtaatcattttatccactgggccatttcc
catcccaaatgcaggctctttagtaattttcctatgtattattttttttc
agtatagggctgtgaaaaataagttgcccctttacaccattgtggagggc
tctctttcttcttcaaggttgctgctttgctttgtctatgcaaaagacta
tgctgcagctttctgcccgatgcatgtgactcatgttatttgtgcattgc
tgtctgatcactgttctactagtatatgtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_75420970_75421219
seq2: B6Ng01-046F02.b_49_298

seq1  TTTGTTTAGCTCTGTACCCCATTTTTAATGGGGTTATTTGAAAAATAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAGCTCTGTACCCCATTTTTAATGGGGTTATTTGAAAAATAAAA  50

seq1  CATTTTCAACAGAGGAACATTGAATGAGAGCGAGGAGGGGCCAAACAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAACAGAGGAACATTGAATGAGAGCGAGGAGGGGCCAAACAGCC  100

seq1  CCTCTTAAAGTATGCTGCTTTCTTTTTTGTTGCTAGGTAACTGGGGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTAAAGTATGCTGCTTTCTTTTTTGTTGCTAGGTAACTGGGGAGGA  150

seq1  GTTTAGCCTGAAGGTTAGAAGCTTGGGACATTGCCTACTTGACTAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGCCTGAAGGTTAGAAGCTTGGGACATTGCCTACTTGACTAAAAGC  200

seq1  CATGCTTCTCCTGTGGGAGCTGTGTGTGTGTGTGTGTGTGTGTGGGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCTCCTGTGGGAGCTGTGTGTGTGTGTGTGTGTGTGTGGGGGGG  250

seq1: chr8_75518645_75519704
seq2: B6Ng01-046F02.g_64_1095 (reverse)

seq1  CAGACATAATACCTTAAAGTAGAAACAGTGATTCCAGAAACAGCAAATGG  50
      ||||||| ||||     ||||| |||||||||  |||  |||||||   |
seq2  CAGACAT-ATAC----TAGTAG-AACAGTGAT--CAG--ACAGCAA--TG  38

seq1  CACCAAATAAACAATGAGTCACATTGGCATTCGGGCAGGAAAGCTGCAGC  100
      || |||||||   |||||||||||  ||| ||||||| ||||||||||||
seq2  CA-CAAATAA--CATGAGTCACAT--GCA-TCGGGCA-GAAAGCTGCAGC  81

seq1  CATTAGTCCTTTTGCATTAGACAAAGCAAAAGCAGCAACCCTTGAAGAAG  150
         |||| |||||||| |||||||||| |||||||||| |||||||||||
seq2  --ATAGT-CTTTTGCA-TAGACAAAGC-AAAGCAGCAA-CCTTGAAGAAG  125

seq1  AAAGAGAGCCCCTCCAACAATGGTGTAAAGGGGCAACTTATTTTTCAACA  200
      |||||||| |||||| |||||||||||||||||||||||||||||| |||
seq2  AAAGAGAG-CCCTCC-ACAATGGTGTAAAGGGGCAACTTATTTTTC-ACA  172

seq1  GCCCTATACTGAAAAAAAATAATACATAGGAAAATTACTAAAGAGCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTATACTGAAAAAAAATAATACATAGGAAAATTACTAAAGAGCCTGC  222

seq1  ATTTGGGATGGGAAATGGCCCAGTGGATAAAATGATTACTGTGTAAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGATGGGAAATGGCCCAGTGGATAAAATGATTACTGTGTAAACAT  272

seq1  GAGGATGAGTTTGGATCCTCATTGCTCACCTAAATGCTGGGTGGGCATGG  350
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAGGATGAGTTTGGATCCTCATTGCTCACATAAATGCTGGGTGGGCATGG  322

seq1  TAGCCTTCTGTAATCCCAGTACGCAGGAGGCAGAGACAGAGGATCCCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTCTGTAATCCCAGTACGCAGGAGGCAGAGACAGAGGATCCCTAT  372

seq1  AGCAAATTGGTGAGCTCTGGGTTCAAGTAAGAGATCCTGCCTTAGTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATTGGTGAGCTCTGGGTTCAAGTAAGAGATCCTGCCTTAGTATTA  422

seq1  CATGATGGAGAGCAACTGAGACAGAAACCAGGCATTAACCTCTGGCCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGGAGAGCAACTGAGACAGAAACCAGGCATTAACCTCTGGCCTCA  472

seq1  ACATGCTGGTTTGCACGTGCAGGCAAACACACTCTTAAGAGCCCGCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGGTTTGCACGTGCAGGCAAACACACTCTTAAGAGCCCGCATCT  522

seq1  GTCAACCTCACTGGGACTGAATAAGTACATAACTTAAGCAGCCTGCCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACCTCACTGGGACTGAATAAGTACATAACTTAAGCAGCCTGCCCAC  572

seq1  GACATCCCTATCTTTTCTGTCCAAGCTCTGGAATAAAGGCTCTGTTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCCCTATCTTTTCTGTCCAAGCTCTGGAATAAAGGCTCTGTTGGAG  622

seq1  CAGTGTATCCTCCCTGTGGGCCATCAGGACAGGAAGCTGAGCTAAACTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTATCCTCCCTGTGGGCCATCAGGACAGGAAGCTGAGCTAAACTGA  672

seq1  ACTCTGGACAGTCAGGTTTGCACAGGCAGGAAGGCATCTGCCTGAAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGACAGTCAGGTTTGCACAGGCAGGAAGGCATCTGCCTGAAACAA  722

seq1  TTAATACTGTCATCATCACAGGAAAGATGAGAAGGTCAGAATAGGCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACTGTCATCATCACAGGAAAGATGAGAAGGTCAGAATAGGCTCCA  772

seq1  TTATTCTACTGTATAGCTTCTATGCCATCTCTAAACCTCTAGGCCCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTACTGTATAGCTTCTATGCCATCTCTAAACCTCTAGGCCCTGCT  822

seq1  GAGACTGGGCTGGTTTTCATAGAAGAAAAGGCCTATTAAGAGGTGTTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGGGCTGGTTTTCATAGAAGAAAAGGCCTATTAAGAGGTGTTTCA  872

seq1  AGCAACTGAAGGAAGATCCTGGGGAGCAGGATTCACATAGTATGGTGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTGAAGGAAGATCCTGGGGAGCAGGATTCACATAGTATGGTGAGT  922

seq1  GGCAGAAGCTAGAACAAAGAGGGGAAGACAGAAGGAGACTGGAGATTGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAGCTAGAACAAAGAGGGGAAGACAGAAGGAGACTGGAGATTGAA  972

seq1  TACAGGATAGTTCTTTTGAGCTAGAGCTCTTTGGAGGCACAGTCTGAGAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGATAGTTCTTTTGAGCTAGAGCTCTTTGGAGGCACAGTCTGAGAG  1022

seq1  ATGAGAATTC  1060
      ||||||||||
seq2  ATGAGAATTC  1032