BAC Information

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BAC

Clone NameB6Ng01-047M05
Chromosome8 (Build37)
Map Location 98,715,382 - 98,716,440
singlet/doubletsinglet
Overlap genenone
Upstream geneBC016201, Map1lc3-ps6, 1700055M20Rik, Zfp319, AA960436, Mmp15, Gtl3, Csnk2a2, 4933406B17Rik, Ccdc113, 4931432M23Rik, EG546088, LOC100041040, Gins3, LOC547022, Ndrg4, Setd6, Cnot1, LOC100041953, LOC100041088, BC031853, LOC100041972, Got2, LOC667445
Downstream geneLOC333331
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047M05.bB6Ng01-047M05.g
ACCDH872531DH872532
length1,1681,027
definitionDH872531|Mus musculus domesticus DNA, BAC clone: B6Ng01-047M05, 5' end.DH872532|Mus musculus domesticus DNA, BAC clone: B6Ng01-047M05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataactcacttaaagagatacgggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacactgctaaagagttacaagtccttgaagaa
aaacaggaaaacacaaccaaacaggtagaagtccttatagaaaaacagga
aaagacatccaaacaggtgatggaaatgaacaaaaccatactagacctaa
aaagggaagtagacacaataaagaaaacccaaagtgaggcaacgctggag
atagaaaccctaggaaagaaatctggaaccatagatgccagcatcagcaa
cagaatacaagagatggaagagagaatctcaggtgcagaagactccatag
agaacatcggcacaacaatcaaagaaaatggaaaatgcaaaaagatccta
actaaaaacatccaggaaatccaggacacaataagaccaaacctacggat
aataggagtggatgagaatgaagattttcaactcagaggaccagcaaaca
tcttcgacaaaattattgaagaaaacttcccaaatctaaagaaagagatg
cccatgaacatacaagaagcctacagaactccaaatagactggaccagaa
aagaaatccctcccgacacataataatcagaacatcaaatgcactaaata
aagatagaatactaaaagcagtaagggaaaaaggtcaagtaacatataaa
ggcaagcctatcagactacaccagatttttcaccagagactatgaaagcc
agagagcctggacagatgttatacagacactagagacacaaatttcagcg
caagctactatacccagccaaactctcaattacatagatggagcatccaa
gtattcaggacaaactaaattcaccatagctctcacgatgcagccttcaa
gataataacgagaaaacatacagacgtaccaccctagaaaacagagatat
cctcacactaaagagactgccagacgatgcacttacacaaatacgagcaa
atactgcttattctattcatgaatcattcatgagctagctaactggtcga
cgacaattctgtgtcagacctcgaaaggactacctagtagcgtaccttca
gcaatgtgtctgaaatcg
gaattctgtttcagggaaaggaggattctcagtaagctaaaaactgaccc
tctaaatactggagaggttagactaattacagtgtatccagatgatgaaa
cataacaggcccttcaaaatcactgagggagaatttgcagtgacatacga
aatgttgataacataatttcagtaaaaaagagcaagaaacggcatagccg
gcttgattccaattacattagaaatgaagacatccccatggaaatgaata
taaacttattactgattatatagactattgactacagaaaaacagtttct
tctaaatagctcttactacttctataaaaataaaatatacattcaaagat
acaaatataactattaagcaagatgagtataaattttgattgtgaggatt
ataaaggttattgtacataaaaggactgagagtgatcagtgcatagtagg
tactgagtcgacttccttctctttttcatttttttctgttctgtgcctca
cccttataggaaataatttgtctaggtattgcatccaaaggccaaattga
cactgagtacattttaatttatgtcaacagaatcaagataaagtgtgttg
gagagaggagagaaaagcttttatgggttgaagtagcctctgaggtgact
tctaaaactccagttcctgtctgattttgtaacctactccagcatggtgc
gattaaatgcaccataagtgagggaataagagtcacatctaaattcacaa
tagtgtgtgtgttacacgttctcggggctattgccaaccctgagcatcat
tcatgtggcggcactcttgaagggggctatatctcatgtgtgaacttttc
tcataagatgcgatcaattagtagcgagtcccttgaaataacttatgaca
gggagacctgagagtagtcaacactgtctagaagcagagagatgctactg
agcctgaagctcgggctctccatttcgtttgagttcctagttgcactggt
atcatgtcaatcgactttcccaaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_98715382_98716440
seq2: B6Ng01-047M05.g_67_1093

seq1  GAATTCTGTTTCAGGGAAAGGAGGATTCTCAGTAAGCTAAAAACTGACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTCAGGGAAAGGAGGATTCTCAGTAAGCTAAAAACTGACCC  50

seq1  TCTAAATACTGGAGAGGTTAGACTAATTACAGTGTATCCAGATGATGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATACTGGAGAGGTTAGACTAATTACAGTGTATCCAGATGATGAAA  100

seq1  CATAACAGGCCCTTCAAAATCACTGAGGGAGAATTTGCAGTGACATACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACAGGCCCTTCAAAATCACTGAGGGAGAATTTGCAGTGACATACGA  150

seq1  AATGTTGATAACATAATTTCAGTAAAAAAGAGCAAGAAACGGCATAGCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGATAACATAATTTCAGTAAAAAAGAGCAAGAAACGGCATAGCCG  200

seq1  GCTTGATTCCAATTACATTAGAAATGAAGACATCCCCATGGAAATGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATTCCAATTACATTAGAAATGAAGACATCCCCATGGAAATGAATA  250

seq1  TAAACTTATTACTGATTATATAGACTATTGACTACAGAAAAACAGTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTATTACTGATTATATAGACTATTGACTACAGAAAAACAGTTTCT  300

seq1  TCTAAATAGCTCTTACTACTTCTATAAAAATAAAATATACATTCAAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATAGCTCTTACTACTTCTATAAAAATAAAATATACATTCAAAGAT  350

seq1  ACAAATATAACTATTAAGCAAGATGAGTATAAATTTTGATTGTGAGGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATAACTATTAAGCAAGATGAGTATAAATTTTGATTGTGAGGATT  400

seq1  ATAAAGGTTATTGTACATAAAAGGACTGAGAGTGATCAGTGCATAGTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGTTATTGTACATAAAAGGACTGAGAGTGATCAGTGCATAGTAGG  450

seq1  TACTGAGTCGACTTCCTTCTCTTTTTCATTTTTTTCTGTTCTGTGCCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGTCGACTTCCTTCTCTTTTTCATTTTTTTCTGTTCTGTGCCTCA  500

seq1  CCCTTATAGGAAATAATTTGTCTAGGTATTGCATCCAAGGGCCAAATTGA  550
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCTTATAGGAAATAATTTGTCTAGGTATTGCATCCAAAGGCCAAATTGA  550

seq1  CACTGAGTACATTTTAATTTATGTCAACAGAATCAAGATAAAGTGTGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGTACATTTTAATTTATGTCAACAGAATCAAGATAAAGTGTGTTG  600

seq1  GAGAGAGGAGAGAAAAGCTTTTATGGGTTGAAGTAGCCTCTGAGGTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGGAGAGAAAAGCTTTTATGGGTTGAAGTAGCCTCTGAGGTGACT  650

seq1  TCT-AAACTCCAGTTCCTGTCTGATTTTGTAACCTACTCCAGCATGGTTC  699
      ||| |||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCTAAAACTCCAGTTCCTGTCTGATTTTGTAACCTACTCCAGCATGGTGC  700

seq1  AATTAAATGCAGCATAATTGAGGGAATAAGAGTCACATCTAAATTCACAA  749
       |||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  GATTAAATGCACCATAAGTGAGGGAATAAGAGTCACATCTAAATTCACAA  750

seq1  TAGTGTGTGTGTTTACACGTTCTCGGGGCTAATTGCCAACCCTGAGCATC  799
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  TAGTGTGTGTG-TTACACGTTCTCGGGGCT-ATTGCCAACCCTGAGCATC  798

seq1  ATTTCATGTGGCGGCACTCTTTAAGGAGGGCTTATAACTTCATGTGTGAA  849
      | ||||||||||||||||||| |||| |||| |||| | |||||||||||
seq2  A-TTCATGTGGCGGCACTCTTGAAGG-GGGC-TATATC-TCATGTGTGAA  844

seq1  CTTTTCTCATTAGGATGGGATCAAATTAGTATAGAGTCCCCTTGATATAA  899
      ||||||||| || |||| |||| ||||||||  |||| ||||||| || |
seq2  CTTTTCTCA-TAAGATGCGATC-AATTAGTAGCGAGT-CCCTTGAAAT-A  890

seq1  ACTTATAGACAGGGAGACTTGAGAGTCAGTCAACACTGCCTTAGAAAGCA  949
      |||||| ||||||||||| ||||||| ||||||||||| | ||| |||||
seq2  ACTTAT-GACAGGGAGACCTGAGAGT-AGTCAACACTGTC-TAG-AAGCA  936

seq1  GAGAAGAGACTACTGAGGCCCTGAAAGCTCGTGCTCCTCCCTCTTTCGTT  999
      ||| |||  ||||||||  |||| ||||||| ||| ||||   |||||  
seq2  GAG-AGATGCTACTGAG--CCTG-AAGCTCGGGCT-CTCC--ATTTCG--  977

seq1  TTTGAGTTTCCATAGTTGCAACTGGTAATCCATTGTTCTATCAGACTTTC  1049
      ||||||||  | ||||||| |||||||   |||   || ||| |||||| 
seq2  TTTGAGTT--CCTAGTTGC-ACTGGTA--TCAT--GTCAATC-GACTTT-  1018

seq1  CCCCAAACAT  1059
       |||||||||
seq2  -CCCAAACAT  1027