BAC Information

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BAC

Clone NameB6Ng01-048A22
Chromosome8 (Build37)
Map Location 33,918,088 - 33,919,216
singlet/doubletsinglet
Overlap genenone
Upstream geneNrg1, 2010007E15Rik, EG666589, EG546052
Downstream geneLOC100042715, LOC628408, EG628412, Wrn, Purg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr, Gtf2e2, Rbpms
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048A22.bB6Ng01-048A22.g
ACCDH872733DH872734
length1,1031,191
definitionDH872733|Mus musculus domesticus DNA, BAC clone: B6Ng01-048A22, 5' end.DH872734|Mus musculus domesticus DNA, BAC clone: B6Ng01-048A22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcccacacttttttttgcaagacaatgactgtttttattttgct
ttttaactgtttgaaaaacaaatttaatacactatattttgatcatgttt
ttccctccccaattcttctcagatcctatcctacccacctaactttattt
tttccttttttttaaaaattaggtattttcctcgtttacatttccaatgc
tatcccaaaagtcccccatacccaccccccaatcccctacccacccactc
cccctttttggccctggcgttcccctgtactagggcatataaagtttgca
tgtccaaagggcctctctttccagtgatggccgactaggccatcttttga
tacatatgcagctagagtcaagagctccggggtactggttagttcataat
gttgttccacctataggatggcagttcccttctcccacacttttaaagaa
tagtaattttcaatgccaaaaataatcccagaacttgagaagagggtggt
tattctttatacaaagaaacaataaccttgattttaagactgcacataaa
gatcacacaaaatgaaaacaaatggcaaatcttaggcatggagctctgtg
aaacactaaaagacttgtttatcacatcaacgtgattcatcaaggaaaca
aggggaggcaaatgctgagaaaccattaatatgcatctagagggacttgg
aacatgatcatctccatgactaaagtaaaagaccttctaccaaaataaag
agaaacacactaaaaagaagagacctggggctgggcctctatgtgtctca
gtggtggagggttctcatgattggctagcttcaatcttcagtctagaata
aaaaagaactcaagggttaagtgttttagctaaggacaaacattgtttta
gatgaatcttcctactttgtctagatatctgaagtgttgttccaggaaag
gttcattgacagagattccaggcccagttcttcttcactttgtcatacct
gacgcttgtttgatccaccagtcttgctgcattgcagtcattctgtatct
cactcccagccatgaagaagctaaggcgtataaacaagtcactcacgttc
ttc
gaattcaagaccaatctggaatacatagggagaccttttaccataggaca
aaataaaatagaatgacatcaaaacactgtatagtaaatgttaaaagtta
ctatatgtaaatatgaatcctatgatttattactctttttcaagatgatt
tttccatcctaagtctgtttccttcccatatcaactttagaatagaatgc
tggaatttgagtgagattatcttaacttcatagataaaattgggaagatc
tgatctcttaataatagggtgtcttctaggacttgggcataggctatttg
tctacttatgttgatcaattccctttatcaggatattacagttttctaat
tgcatatgttttagttcatttgtgtttaaatatttattgtttcccccacg
ctatttcaagcaattgcatgtctaagtgaaagtggacaaaataacataat
taaaaaattttgaattcaaatttcctactgatgatgggacggcaatgtac
ttttaaataccgactttaaatcttaacatattttagtatcagatatattt
aaattgatcttggtgtatcttctatgatcaatgagttattcatctggtct
tcactttttaaatatttggggatttttctagatgcctttcagttagacat
ttcaagtttaattcctttgtggtttgaaggaatacttcctataactatgt
tatttctatattttttaaaggtgagatttatggcccatagtgaagttcat
cttggtgagtgttctaagtttcagaagaatgtatattctgattttattga
gtgaaatagtctataaatgtcaatcagataaagttgattgatgaggactg
atagtggtctgtaatgtttactgattttctgtcttcttgacttattactg
agtgtggtattaaagttgttaaccacagtgatgcatttggctatttgtgc
tctaagtgcttcagatttgcttatgaattttaataccctgtgttagatgc
acacatcaggatactgagcttttggaaactgtttagattctgcagcctct
cttgtcttgcctattttcttgcttgaagtgggctgtctgattattagtat
acagtttcttttgatctgatgaaatgggatagactcccatctcggtactt
tccatctactcgatggtcgattcgcaacatccgtagtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_33918088_33919216
seq2: B6Ng01-048A22.b_47_1149

seq1  GAATTCTCCCACACTTTTTTTTGCAAGACAATGACTGTTTTTATTTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCACACTTTTTTTTGCAAGACAATGACTGTTTTTATTTTGCT  50

seq1  TTTTAACTGTTTGAAAAACAAATTTAATACACTATATTTTGATCATGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTGTTTGAAAAACAAATTTAATACACTATATTTTGATCATGTTT  100

seq1  TTCCCTCCCCAATTCTTCTCAGATCCTATCCTACCCACCTAACTTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCCCCAATTCTTCTCAGATCCTATCCTACCCACCTAACTTTATTT  150

seq1  TTTCCTTTTTTTTAAAAATTAGGTATTTTCCTCGTTTACATTTCCAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTTTTTAAAAATTAGGTATTTTCCTCGTTTACATTTCCAATGC  200

seq1  TATCCCAAAAGTCCCCCATACCCACCCCCCAATCCCCTACCCACCCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAAAAGTCCCCCATACCCACCCCCCAATCCCCTACCCACCCACTC  250

seq1  CCCCTTTTTGGCCCTGGCGTTCCCCTGTACTAGGGCATATAAAGTTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTTGGCCCTGGCGTTCCCCTGTACTAGGGCATATAAAGTTTGCA  300

seq1  TGTCCAAAGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAAGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGA  350

seq1  TACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAAT  400

seq1  GTTGTTCCACCTATAGGATGGCAGTTCCCTTCTCCCACACTTTTAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCCACCTATAGGATGGCAGTTCCCTTCTCCCACACTTTTAAAGAA  450

seq1  TAGTAATTTTCAATGCCAAAAATAATCCCAGAACTTGAGAAGAGGGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTTTCAATGCCAAAAATAATCCCAGAACTTGAGAAGAGGGTGGT  500

seq1  TATTCTTTATACAAAGAAACAATAACCTTGATTTTAAGACTGCACATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTATACAAAGAAACAATAACCTTGATTTTAAGACTGCACATAAA  550

seq1  GATCACACAAAATGAAAACAAATGGCAAATCTTAGGCATGGAGCTCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACACAAAATGAAAACAAATGGCAAATCTTAGGCATGGAGCTCTGTG  600

seq1  AAACACTAAAAGACTTGTTTATCACATCAACGTGATTCATCAAGGAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTAAAAGACTTGTTTATCACATCAACGTGATTCATCAAGGAAACA  650

seq1  AGGGGAGGCAAATGCTGAGAAACCATTAATATGCATCTAGAGGGACTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGCAAATGCTGAGAAACCATTAATATGCATCTAGAGGGACTTGG  700

seq1  AACATGATCATCTCCATGACTAAAGTAAAAGACCTTCTACCAAAATAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATCATCTCCATGACTAAAGTAAAAGACCTTCTACCAAAATAAAG  750

seq1  AGAAACACACTAAAAAGAAGAGACCTGGGGCTGGGCCTCTATGTGTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACACTAAAAAGAAGAGACCTGGGGCTGGGCCTCTATGTGTCTCA  800

seq1  GTGGTGGAGGGTTCTCATGATTGGCTAGCTTCAATCTTCAGTCTAGAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGAGGGTTCTCATGATTGGCTAGCTTCAATCTTCAGTCTAGAATA  850

seq1  AAAAAGAACTCAAGGGTTAAGTGTTTTAGCTAAAGGACAAAACATTGTTT  900
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  AAAAAGAACTCAAGGGTTAAGTGTTTTAGCT-AAGGAC-AAACATTGTTT  898

seq1  TAAGAATGAATCTTCCTACTTTGTCTAAGAATAATCTGAAGTGTTGTTCC  950
      ||   ||||||||||||||||||||| |||   |||||||||||||||||
seq2  TA--GATGAATCTTCCTACTTTGTCT-AGA--TATCTGAAGTGTTGTTCC  943

seq1  AGGGAAAGGTTCCATTGAACAGAGATTTCCCAGGGCCCCAGTTCCTTCTT  1000
      | ||||||||| ||||| |||||||||  |||||  ||||||| ||||||
seq2  A-GGAAAGGTT-CATTG-ACAGAGATT--CCAGG--CCCAGTT-CTTCTT  985

seq1  CACTTTGTCATACCTGACAGCCTTGTTTGATCCACACAGTCTTGGCTGCA  1050
      ||||||||||||||||||   |||||||||||||| ||||||| ||||||
seq2  CACTTTGTCATACCTGAC--GCTTGTTTGATCCAC-CAGTCTT-GCTGCA  1031

seq1  TTGCAGTCATTCCTGGTATCTCACTCACAG-CATGAAGAAAAGCATAGGC  1099
      ||||||||||||   ||||||||||| ||| |||||||  ||||  ||||
seq2  TTGCAGTCATTC--TGTATCTCACTCCCAGCCATGAAG--AAGCTAAGGC  1077

seq1  GTAGAAAACAAGGCTCACTCAACGTTCTCC  1129
      |||  |||||||  |||||| ||||||| |
seq2  GTA-TAAACAAG--TCACTC-ACGTTCTTC  1103