BAC Information

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BAC

Clone NameB6Ng01-049P16
Chromosome8 (Build37)
Map Location 49,434,855 - 49,598,369
singlet/doubletdoublet
Overlap geneOdz3
Upstream geneStox2, 4930448N21Rik, D030016E14Rik, Rwdd4a, LOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd
Downstream gene2900073C17Rik, LOC100039866, 4930555F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049P16.bB6Ng01-049P16.g
ACCDH874072DH874073
length761927
definitionDH874072|Mus musculus domesticus DNA, BAC clone: B6Ng01-049P16, 5' end.DH874073|Mus musculus domesticus DNA, BAC clone: B6Ng01-049P16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,597,610 - 49,598,369)(49,434,855 - 49,435,791)
sequence
gaattcagtgtggtcactatgggttttaactagccatgttaagtttgccc
tcatatgggcctttagatgcttagatacgattgcagcacaggtatgccgt
gtaaattttgggtgctgtttatcttggtttagtttgagacccatgggatc
ttgagtagatggaagaatgaatttcactgcatgtatgttattgagaaata
ttcttaagcagtgtgtggtatctgcttaatttcactactttatgaatttg
cagcaaaatctgtatgcagtacacatcaatttgtatagtcttgtagcatc
taaccaaatttatagattcattagccaaaaaaagttaacatatatccatg
cccaagacgggcacttttcctagtgctgaaaataaacccacggccagccg
agtgcgtaggaaacacataaactggctaccccatccctagctcatatcaa
gtaactttgtgagtcttagatatgttgaaaatttttcatctgtatttcat
caatgtatcatgttatattgaaatgctaatcagtaggaaatgttttccag
tttgctcaaaggtttcgttaacctttgtgaaatacgttggtgaaaactga
gtattttaccccatttttttttcttttaagcatggattatatacagttga
tcctaaagaaggttccaatgtgtacctttcagtagccttaaatgtcacca
cacgtcaccagatgtgaatgtgagaaaggatcccctcctcgagggggtgg
gggggggtcgg
gaattcttcttctacttacgagagacaggtactccctcgcttgtcttccg
tttaagaacttttattttttttctgtgaagcgttgttacaataattccca
cctaacattttttaaggcatggaagtcaaaatcctctgacgtcccccaaa
gtacactgatcactgaagctgcttccacactgacaatgtttcttgtgtat
ttgcaacataaatgcttgatatattgtatgccttgttatttccggggagg
gactcagtctgatgcatattggttcctctagctataccgtgctactgatg
agtgtgaattaaggcagaatggatcctagagatttccaagccaatcttta
atcaatcaatcaatgctaccgactcatacagtcctctttcagtcatacat
ggggagggagtggggcgggaatgaaaaccatttgacaccaaaataagtac
cagagtagagcttcaggaagcaggagggcagggcttcctgtgtcttgacc
cacccctccccaaagacctcagtcatcagggaaagcaagccctgctactc
ccaaatcccaggcttctcccagcaccgagacctggttctaggcaacaacc
taagtgtgttttttggggtgtggtgttccccttcgccccgggttccgttc
ttagctactctcccggcaacaggaggggttgttacaatttatttgcaggg
aaagcgaaagagagggtccaggatgctgaagatacagaaggcaaattatc
ctccaatcaaacctagccctttaacttgataacttagttgactaacccat
cttctcctctttttttttttcattaaactggaaacagcccccagagactt
gttaattcaaaaatttagatttatctcaaatcctagaatttatcttctct
aagagagaagagagcttctatctgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49597610_49598369
seq2: B6Ng01-049P16.b_45_805 (reverse)

seq1  CCGA-CCCCCCCCACCCCCTCGAGGAGGGGATCCTTTCTCACATTCACAT  49
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACCCCCCCCCACCCCCTCGAGGAGGGGATCCTTTCTCACATTCACAT  50

seq1  CTGGTGACGTGTGGTGACATTTAAGGCTACTGAAAGGTACACATTGGAAC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGACGTGTGGTGACATTTAAGGCTACTGAAAGGTACACATTGGAAC  100

seq1  CTTCTTTAGGATCAACTGTATATAATCCATGCTTAAAAGAAAAAAAAATG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTAGGATCAACTGTATATAATCCATGCTTAAAAGAAAAAAAAATG  150

seq1  GGGTAAAATACTCAGTTTTCACCAACGTATTTCACAAAGGTTAACGAAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAATACTCAGTTTTCACCAACGTATTTCACAAAGGTTAACGAAAC  200

seq1  CTTTGAGCAAACTGGAAAACATTTCCTACTGATTAGCATTTCAATATAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGCAAACTGGAAAACATTTCCTACTGATTAGCATTTCAATATAAC  250

seq1  ATGATACATTGATGAAATACAGATGAAAAATTTTCAACATATCTAAGACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACATTGATGAAATACAGATGAAAAATTTTCAACATATCTAAGACT  300

seq1  CACAAAGTTACTTGATATGAGCTAGGGATGGGGTAGCCAGTTTATGTGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGTTACTTGATATGAGCTAGGGATGGGGTAGCCAGTTTATGTGTT  350

seq1  TCCTACGCACTCGGCTGGCCGTGGGTTTATTTTCAGCACTAGGAAAAGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACGCACTCGGCTGGCCGTGGGTTTATTTTCAGCACTAGGAAAAGTG  400

seq1  CCCGTCTTGGGCATGGATATATGTTAACTTTTTTTGGCTAATGAATCTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTCTTGGGCATGGATATATGTTAACTTTTTTTGGCTAATGAATCTAT  450

seq1  AAATTTGGTTAGATGCTACAAGACTATACAAATTGATGTGTACTGCATAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGGTTAGATGCTACAAGACTATACAAATTGATGTGTACTGCATAC  500

seq1  AGATTTTGCTGCAAATTCATAAAGTAGTGAAATTAAGCAGATACCACACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTGCTGCAAATTCATAAAGTAGTGAAATTAAGCAGATACCACACA  550

seq1  CTGCTTAAGAATATTTCTCAATAACATACATGCAGTGAAATTCATTCTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAAGAATATTTCTCAATAACATACATGCAGTGAAATTCATTCTTC  600

seq1  CATCTACTCAAGATCCCATGGGTCTCAAACTAAACCAAGATAAACAGCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACTCAAGATCCCATGGGTCTCAAACTAAACCAAGATAAACAGCAC  650

seq1  CCAAAATTTACACGGCATACCTGTGCTGCAATCGTATCTAAGCATCTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATTTACACGGCATACCTGTGCTGCAATCGTATCTAAGCATCTAAA  700

seq1  GGCCCATATGAGGGCAAACTTAACATGGCTAGTTAAAACCCATAGTGACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATATGAGGGCAAACTTAACATGGCTAGTTAAAACCCATAGTGACC  750

seq1  ACACTGAATTC  760
      |||||||||||
seq2  ACACTGAATTC  761

seq1: chr8_49434855_49435791
seq2: B6Ng01-049P16.g_69_995

seq1  GAATTCTTCTTCTACTTACGAGAGACAGGTACTCCCTCGCTTGTCTTCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTCTACTTACGAGAGACAGGTACTCCCTCGCTTGTCTTCCG  50

seq1  TTTAAGAACTTTTATTTTTTTTCTGTGAAGCGTTGTTACAATAATTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAACTTTTATTTTTTTTCTGTGAAGCGTTGTTACAATAATTCCCA  100

seq1  CCTAACATTTTTTAAGGCATGGAAGTCAAAATCCTCTGACGTCCCCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACATTTTTTAAGGCATGGAAGTCAAAATCCTCTGACGTCCCCCAAA  150

seq1  GTACACTGATCACTGAAGCTGCTTCCACACTGACAATGTTTCTTGTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTGATCACTGAAGCTGCTTCCACACTGACAATGTTTCTTGTGTAT  200

seq1  TTGCAACATAAATGCTTGATATATTGTATGCCTTGTTATTTCCGGGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACATAAATGCTTGATATATTGTATGCCTTGTTATTTCCGGGGAGG  250

seq1  GACTCAGTCTGATGCATATTGGTTCCTCTAGCTATACCGTGCTACTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGTCTGATGCATATTGGTTCCTCTAGCTATACCGTGCTACTGATG  300

seq1  AGTGTGAATTAAGGCAGAATGGATCCTAGAGATTTCCAAGCCAATCTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAATTAAGGCAGAATGGATCCTAGAGATTTCCAAGCCAATCTTTA  350

seq1  ATCAATCAATCAATGCTACCGACTCATACAGTCCTCTTTCAGTCATACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCAATCAATGCTACCGACTCATACAGTCCTCTTTCAGTCATACAT  400

seq1  GGGGAGGGAGTGGGGCGGGAATGAAAACCATTTGACACCAAAATAAGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGAGTGGGGCGGGAATGAAAACCATTTGACACCAAAATAAGTAC  450

seq1  CAGAGTAGAGCTTCAGGAAGCAGGAGGGCAGGGCTTCCTGTGTCTTGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAGAGCTTCAGGAAGCAGGAGGGCAGGGCTTCCTGTGTCTTGACC  500

seq1  CACCCCTCCCCAAAGACCTCAGTCATCAGGGAAAGCAAGCCCTGCTACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTCCCCAAAGACCTCAGTCATCAGGGAAAGCAAGCCCTGCTACTC  550

seq1  CCAAATCCCAGGCTTCTCCCAGCACCGAGACCTGGTTCTAGGCAACAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCCCAGGCTTCTCCCAGCACCGAGACCTGGTTCTAGGCAACAACC  600

seq1  TAAGTGTGTTTTTTGGGGTGTGGTGTTCCCCTTCGCCCCGGG-TCCGTTC  649
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAAGTGTGTTTTTTGGGGTGTGGTGTTCCCCTTCGCCCCGGGTTCCGTTC  650

seq1  TTAGCTACTCTCCCGGCAACAGGAGGGGTTGTTACAATTTATTGCAAGGG  699
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  TTAGCTACTCTCCCGGCAACAGGAGGGGTTGTTACAATTTATTTGCAGGG  700

seq1  AAAGCGAAAGAGAGGGTCCAGGATGCTGAAGATACAGAAGGCAAATTATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGAAAGAGAGGGTCCAGGATGCTGAAGATACAGAAGGCAAATTATC  750

seq1  CTCC-ATCAAACCCAGCCCTTTTAACTTGATAACTAAGTTGACTTAACCA  798
      |||| |||||||| ||||| ||||||||||||||| ||||||| ||||| 
seq2  CTCCAATCAAACCTAGCCC-TTTAACTTGATAACTTAGTTGAC-TAACCC  798

seq1  ATCTTTCTCCTCTTTTTTTTTTTCATTAAACTGGAAACAGCCCCCCAGAG  848
      ||| |||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATC-TTCTCCTCTTTTTTTTTTTCATTAAACTGGAAACAG-CCCCCAGAG  846

seq1  AACTTGTTAATTCAAAAAATTTAAGATTTAATCTCAAATCCTAGAATTAT  898
       |||||||||||||||||  || |||||| |||||||||||||||||| |
seq2  -ACTTGTTAATTCAAAAA--TTTAGATTT-ATCTCAAATCCTAGAATT-T  891

seq1  ATCTTCTCCTAAAGAGAGGAGAGAGGCTTCTATCTGTGA  937
      ||||||||   ||||||| ||||| ||||||||||||||
seq2  ATCTTCTC--TAAGAGAGAAGAGA-GCTTCTATCTGTGA  927