BAC Information

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BAC

Clone NameB6Ng01-050D15
Chromosome8 (Build37)
Map Location 105,499,236 - 105,499,858
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh11, EG667618
Downstream geneLOC100041368, 1600027J07Rik, LOC100041397
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050D15.bB6Ng01-050D15.g
ACCDH874238DH874239
length9461,152
definitionDH874238|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D15, 5' end.DH874239|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgactggcacacacatgctaaagaagtattgacacaaccagta
atttcaccaaaatttccttgtttgtaaagtgatgatattgaataaattcc
attgtactttagggttttccttgtttgttttcaggtaggatcacttctat
tccacactagccttaaataactctctatatagtcaaagaagatctttgct
ttgtttgttttgtttgtttgtagcaagggtctattatggagccccagctg
tcctggaactcactatatataggaggctggtctcaaactcacatagattt
gactgcctctgcctcccagtccttggattagggggtatgcactatcatgc
cctgtccttctctggagactaaggtgattcacctgtctcacctcctgagt
gctgagattgcaagcttgtcaattactctcggtttatataatgctggagt
caaggctagggcttcatgagcactttgcaatcaccccaccaactgagcta
tgaccctagttcctaaaactgcccaattctatctctttgttgtatggttg
gttgctttttccagtgctggggattgaatccagggcatcttgcatagaat
ggttaatgctttcccactgagtgaaacacaccccacactccagcctcttc
atagtttaaattaagagttccagagaaagatctgaaattttgaagaccag
ctctttcaggtaacagtgccacttccttagggtaaaggctttaatatctt
taattttcaggatttgtttttaaccaaaaataaaatgagtaaatattctt
caagggatttttggttaagataaatgacatggcatatgctaaatacgtag
cactgtacctagaaagagtgggtacttaatatagttgtgtaccaataatt
tatataaagtaaaattttgatcttcccatacactgtctcaaaagaa
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcacaccagtcagaatggctaagattaaaaactaaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtc
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttctcca
taaaattggacatagtactactggaggatcccacagtacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatactcagaagctggaaagaaaccagat
gtccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtaccactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcattatcctgagtgaagtaacccaatcacaaa
ggaactcacacaacatgtactcactgataagtggatattagtccagaaac
ttaggataccaaagatataagatacaatttgctaaatgcatgaaactcaa
gaagaacgaagaccaaagtgtggacactttgccccttcttacaattggga
acaaaacacccatggaaggagttacagagacgaaatttggagctgtgtcg
aaaagatggaccatcttgtgattgccatatccagggatccatcccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttgctgaa
aggacccagatacagctgtctcttgtgagactatgctgggcctagcaaac
acagaagtgatgctcacagtcagctgttgatgatcacaggccccatgaga
gctagagaagtacccaagagctaaaggactgcaccctatagtgaacaaca
atatgactaccagtactcggagctcttgtctctagctgcatatgtatcaa
agatgctaatgcatcactgaacaaaggccatggatttcaggttattgtcc
atccgaccaaggcgaaggatggtgcgttagagagtagattgtggcgtgcg
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_105499236_105499858
seq2: B6Ng01-050D15.b_42_664 (reverse)

seq1  CACTCAGTGGGAAAGCATTAACCATTCTATGCAAGATGCCCTGGATTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGTGGGAAAGCATTAACCATTCTATGCAAGATGCCCTGGATTCAA  50

seq1  TCCCCAGCACTGGAAAAAGCAACCAACCATACAACAAAGAGATAGAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGCACTGGAAAAAGCAACCAACCATACAACAAAGAGATAGAATTG  100

seq1  GGCAGTTTTAGGAACTAGGGTCATAGCTCAGTTGGTGGGGTGATTGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTTTAGGAACTAGGGTCATAGCTCAGTTGGTGGGGTGATTGCAAA  150

seq1  GTGCTCATGAAGCCCTAGCCTTGACTCCAGCATTATATAAACCGAGAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCATGAAGCCCTAGCCTTGACTCCAGCATTATATAAACCGAGAGTA  200

seq1  ATTGACAAGCTTGCAATCTCAGCACTCAGGAGGTGAGACAGGTGAATCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACAAGCTTGCAATCTCAGCACTCAGGAGGTGAGACAGGTGAATCAC  250

seq1  CTTAGTCTCCAGAGAAGGACAGGGCATGATAGTGCATACCCCCTAATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCTCCAGAGAAGGACAGGGCATGATAGTGCATACCCCCTAATCCA  300

seq1  AGGACTGGGAGGCAGAGGCAGTCAAATCTATGTGAGTTTGAGACCAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGGGAGGCAGAGGCAGTCAAATCTATGTGAGTTTGAGACCAGCCT  350

seq1  CCTATATATAGTGAGTTCCAGGACAGCTGGGGCTCCATAATAGACCCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATATAGTGAGTTCCAGGACAGCTGGGGCTCCATAATAGACCCTTG  400

seq1  CTACAAACAAACAAAACAAACAAAGCAAAGATCTTCTTTGACTATATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAACAAACAAAACAAACAAAGCAAAGATCTTCTTTGACTATATAGA  450

seq1  GAGTTATTTAAGGCTAGTGTGGAATAGAAGTGATCCTACCTGAAAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATTTAAGGCTAGTGTGGAATAGAAGTGATCCTACCTGAAAACAAA  500

seq1  CAAGGAAAACCCTAAAGTACAATGGAATTTATTCAATATCATCACTTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAAACCCTAAAGTACAATGGAATTTATTCAATATCATCACTTTAC  550

seq1  AAACAAGGAAATTTTGGTGAAATTACTGGTTGTGTCAATACTTCTTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGAAATTTTGGTGAAATTACTGGTTGTGTCAATACTTCTTTAGC  600

seq1  ATGTGTGTGCCAGTCATGAATTC  623
      |||||||||||||||||||||||
seq2  ATGTGTGTGCCAGTCATGAATTC  623