BAC Information

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BAC

Clone NameB6Ng01-051O15
Chromosome8 (Build37)
Map Location 106,323,472 - 106,386,677
singlet/doubletdoublet
Overlap geneLOC100041397
Upstream geneEG667618, LOC100041368, 1600027J07Rik
Downstream geneLOC667656, Cdh5, Bean, Tk2, Cklf, Cmtm2a, Cmtm2b, Cmtm3, Cmtm4, Dync1li2, Ccdc79, Appbp1, Car7, LOC628007, 4833426J09Rik, Cdh16, Rrad, 1110019N10Rik, EG637550, LOC382052, LOC100041473, Ces6, LOC628050, 4932416K20Rik, BC015286, Matr3-ps2, Ces2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051O15.bB6Ng01-051O15.g
ACCDH875422DH875423
length1,166706
definitionDH875422|Mus musculus domesticus DNA, BAC clone: B6Ng01-051O15, 5' end.DH875423|Mus musculus domesticus DNA, BAC clone: B6Ng01-051O15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,385,502 - 106,386,677)(106,323,472 - 106,324,177)
sequence
gaattcattaacattttacaggtatgggggcagaggttcatagagtgaaa
gtgacattttctattactagtggagaggtaaggggtgagacttttaccca
aacatttgcccaagacaccagtgatggcaactgttaacgtctacccaagt
gcaggaaaagctcatgtctgcagacatcacagagtccgtctccttcccta
gcactcagtgcggcagctgggtgtctctggcttcccttcctgcatctcac
tgccatttctttcaagtgaacaaaagatcttacagcttctttacaaatac
tctgcaggcatcaaccctgcctttctgtagcttcaaacaatgtccccaaa
ggtgcctggtttcctcttctgtttcttctctgctcaatacttttgagtca
gtttaagcctaacacatctgaactgttactgaatgctcgtgcctggtaat
tgactcacacaagacagctgtgagcgttgctgcttgtgccaaccaccact
agaaacgactgcaggtcacagggaagacaaataacccccaacttgagttc
aatttaatttcctcagtcccagagaaactttttcacctgtcagcctcttg
tttgttgccaaccaagaagccagtctccttgtctctgacctgggtgggct
gtagtgtttggaaagtgctgagcgatgggtgttgggctactttaaaagac
tggccctttgccctgggacatggctgttgattggattctagcaatccaat
tggttttctgtcttaaagtccttacctttcacttttagggaatgaagtgt
ccaaaccatacaggcgaaaggagatgagaagttcaaacgctttgtaggtg
aatttgtgcttcatcttctacctcatactatcagggaatcaatttctcat
gcgctcccctgaacaggaaaattgctaaacaaagcaaccagtgattaaat
gtccaatagaattgtcagtacttgaatggacaataatttaagtaggaata
ttgatgtttgtcaacctggccagctttactgcagcccaggggcctgacca
aaggactaagaagatctggaatgcatgctggatttcctggggtcagagtt
aatttcatgtgatttcatgccttataataaggaattcattcagcgtaatg
tatcctgattcatatt
gaattcaaagtccacagcagcaggagatggggttactgctgccatgggag
ggagagctgctaccagcccaggttggatccaaacactaggattaccagcg
ggagacactccctgcatctgcccagtggtgggccttggagtatacagatt
gttcccaaaactagcatagcatgggactttgcatgaaggtgggctcatgg
acactgttgcgtttgcaaccatcctctgctggatacagccatggctagga
gcaaaccctaaggagctaccactgctgacagtgggtgagctcagaatagc
cgcctcagaagggggcgtggtatccatgtccacctctgcaggccacggag
atggctcccagtacatgtcttcacagtcctgagatgctgaggtagggaag
actgtgggagggttcctggggaagagggatagaggagccgaagagaaggg
gagaggagggtggctagctgtgcacactgacactgtggagtccctcctgc
aggaggagggattgaaagacaaagcttcagcacctggcctggggaggtca
gaaatagcaggagctgtggccacattagtagggtctttcttcttgaaatc
tggtggagtctccacacagggcccagcctgacagggaggaagagagtcag
aagggagaaccaaaggagaaatagggattgtgggtatacttggtgggagg
gaaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_106385502_106386677
seq2: B6Ng01-051O15.b_48_1213 (reverse)

seq1  AATATGAAATCAGGGTTCACTGTACGCTGAATGAACTTCCTTTATTTATA  50
      |||||| ||||||| |  ||  ||||||||||||| ||||||   |||||
seq2  AATATG-AATCAGGAT--ACATTACGCTGAATGAA-TTCCTT--ATTATA  44

seq1  AGAC-TAAAATCACATGAAATTAACTCTGACCCCAGGAAATCCAGCATGC  99
      || | | |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGAAATCACATGAAATTAACTCTGACCCCAGGAAATCCAGCATGC  94

seq1  ATTCCCAGACTCTTCTTTGTCCTTTTGGTCAGCCCCCTGGGCTGCAGTAA  149
      ||| ||||| ||||||| |||| ||||||||| |||||||||||||||||
seq2  ATT-CCAGA-TCTTCTTAGTCC-TTTGGTCAGGCCCCTGGGCTGCAGTAA  141

seq1  AGCTGGGCAGGTTGACAAACATCAAATATTCCTTACTTATATTTATTGTC  199
      |||||| |||||||||||||||| |||||||| |||||| | ||||||||
seq2  AGCTGGCCAGGTTGACAAACATC-AATATTCC-TACTTA-AATTATTGTC  188

seq1  CATTCAAGTACTGACATTTCCTATTGGACATTTAATCACTGGTTGCTTTG  249
      |||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  CATTCAAGTACTGACAATT-CTATTGGACATTTAATCACTGGTTGCTTTG  237

seq1  TTTAGCATTTTTCCTGTTCAGGGGAGCGCATGAGAAATTGATTCCCTGAT  299
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAATTTTCCTGTTCAGGGGAGCGCATGAGAAATTGATTCCCTGAT  287

seq1  AGTATGAGGTAGAAGATGAAGCACAAATTCACCTAC-AAGCGTTTGAACT  348
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTATGAGGTAGAAGATGAAGCACAAATTCACCTACAAAGCGTTTGAACT  337

seq1  TCTCATCTCCTTTCGCCTGTATGGTTTGGACACTTCATTCCCT-AAAGTG  397
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTCATCTCCTTTCGCCTGTATGGTTTGGACACTTCATTCCCTAAAAGTG  387

seq1  AAAGGTAAGGACTTTAAGACAGAAAACCAATTGGATTGCTAGAATCCAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTAAGGACTTTAAGACAGAAAACCAATTGGATTGCTAGAATCCAAT  437

seq1  CAACAGCCATGTCCCAGGGCAAAGGGCCAGTCTTTTAAAGTAGCCCAACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCCATGTCCCAGGGCAAAGGGCCAGTCTTTTAAAGTAGCCCAACA  487

seq1  CCCATCGCTCAGCACTTTCCAAACACTACAGCCCACCCAGGTCAGAGACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCGCTCAGCACTTTCCAAACACTACAGCCCACCCAGGTCAGAGACA  537

seq1  AGGAGACTGGCTTCTTGGTTGGCAACAAACAAGAGGCTGACAGGTGAAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACTGGCTTCTTGGTTGGCAACAAACAAGAGGCTGACAGGTGAAAA  587

seq1  AGTTTCTCTGGGACTGAGGAAATTAAATTGAACTCAAGTTGGGGGTTATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTCTGGGACTGAGGAAATTAAATTGAACTCAAGTTGGGGGTTATT  637

seq1  TGTCTTCCCTGTGACCTGCAGTCGTTTCTAGTGGTGGTTGGCACAAGCAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCCTGTGACCTGCAGTCGTTTCTAGTGGTGGTTGGCACAAGCAG  687

seq1  CAACGCTCACAGCTGTCTTGTGTGAGTCAATTACCAGGCACGAGCATTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGCTCACAGCTGTCTTGTGTGAGTCAATTACCAGGCACGAGCATTCA  737

seq1  GTAACAGTTCAGATGTGTTAGGCTTAAACTGACTCAAAAGTATTGAGCAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAGTTCAGATGTGTTAGGCTTAAACTGACTCAAAAGTATTGAGCAG  787

seq1  AGAAGAAACAGAAGAGGAAACCAGGCACCTTTGGGGACATTGTTTGAAGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAACAGAAGAGGAAACCAGGCACCTTTGGGGACATTGTTTGAAGC  837

seq1  TACAGAAAGGCAGGGTTGATGCCTGCAGAGTATTTGTAAAGAAGCTGTAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAAGGCAGGGTTGATGCCTGCAGAGTATTTGTAAAGAAGCTGTAA  887

seq1  GATCTTTTGTTCACTTGAAAGAAATGGCAGTGAGATGCAGGAAGGGAAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTGTTCACTTGAAAGAAATGGCAGTGAGATGCAGGAAGGGAAGC  937

seq1  CAGAGACACCCAGCTGCCGCACTGAGTGCTAGGGAAGGAGACGGACTCTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACCCAGCTGCCGCACTGAGTGCTAGGGAAGGAGACGGACTCTG  987

seq1  TGATGTCTGCAGACATGAGCTTTTCCTGCACTTGGGTAGACGTTAACAGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTGCAGACATGAGCTTTTCCTGCACTTGGGTAGACGTTAACAGT  1037

seq1  TGCCATCACTGGTGTCTTGGGCAAATGTTTGGGTAAAAGTCTCACCCCTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCACTGGTGTCTTGGGCAAATGTTTGGGTAAAAGTCTCACCCCTT  1087

seq1  ACCTCTCCACTAGTAATAGAAAATGTCACTTTCACTCTATGAACCTCTGC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCACTAGTAATAGAAAATGTCACTTTCACTCTATGAACCTCTGC  1137

seq1  CCCCATACCTGTAAAATGTTAATGAATTC  1176
      |||||||||||||||||||||||||||||
seq2  CCCCATACCTGTAAAATGTTAATGAATTC  1166

seq1: chr8_106323472_106324177
seq2: B6Ng01-051O15.g_68_773

seq1  GAATTCAAAGTCCACAGCAGCAGGAGATGGGGTTACTGCTGCCATGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTCCACAGCAGCAGGAGATGGGGTTACTGCTGCCATGGGAG  50

seq1  GGAGAGCTGCTACCAGCCCAGGTTGGATCCAAACACTAGGATTACCAGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCTGCTACCAGCCCAGGTTGGATCCAAACACTAGGATTACCAGCG  100

seq1  GGAGACACTCCCTGCATCTGCCCAGTGGTGGGCCTTGGAGTATACAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACACTCCCTGCATCTGCCCAGTGGTGGGCCTTGGAGTATACAGATT  150

seq1  GTTCCCAAAACTAGCATAGCATGGGACTTTGCATGAAGGTGGGCTCATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAAAACTAGCATAGCATGGGACTTTGCATGAAGGTGGGCTCATGG  200

seq1  ACACTGTTGCGTTTGCAACCATCCTCTGCTGGATACAGCCATGGCTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTTGCGTTTGCAACCATCCTCTGCTGGATACAGCCATGGCTAGGA  250

seq1  GCAAACCCTAAGGAGCTACCACTGCTGACAGTGGGTGAGCTCAGAATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCCTAAGGAGCTACCACTGCTGACAGTGGGTGAGCTCAGAATAGC  300

seq1  CGCCTCAGAAGGGGGCGTGGTATCCATGTCCACCTCTGCAGGCCACGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCAGAAGGGGGCGTGGTATCCATGTCCACCTCTGCAGGCCACGGAG  350

seq1  ATGGCTCCCAGTACATGTCTTCACAGTCCTGAGATGCTGAGGTAGGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCCCAGTACATGTCTTCACAGTCCTGAGATGCTGAGGTAGGGAAG  400

seq1  ACTGTGGGAGGGTTCCTGGGGAAGAGGGATAGAGGAGCCGAAGAGAAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGGAGGGTTCCTGGGGAAGAGGGATAGAGGAGCCGAAGAGAAGGG  450

seq1  GAGAGGAGGGTGGCTAGCTGTGCACACTGACACTGTGGAGTCCCTCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGGGTGGCTAGCTGTGCACACTGACACTGTGGAGTCCCTCCTGC  500

seq1  AGGAGGAGGGATTGAAAGACAAAGCTTCAGCACCTGGCCTGGGGAGGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGGGATTGAAAGACAAAGCTTCAGCACCTGGCCTGGGGAGGTCA  550

seq1  GAAATAGCAGGAGCTGTGGCCACATTAGTAGGGTCTTTCTTCTTGAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCAGGAGCTGTGGCCACATTAGTAGGGTCTTTCTTCTTGAAATC  600

seq1  TGGTGGAGTCTCCACACAGGGCCCAGCCTGACAGGGAGGAAGAGAGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGTCTCCACACAGGGCCCAGCCTGACAGGGAGGAAGAGAGTCAG  650

seq1  AAGGGAGAACCAAAGGAGAAATAGGGATTGTGGGTATACTTGGTGGGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGAACCAAAGGAGAAATAGGGATTGTGGGTATACTTGGTGGGAGG  700

seq1  GAAGGT  706
      ||||||
seq2  GAAGGT  706