BAC Information

Click to search

BAC

Clone NameB6Ng01-051P14
Chromosome8 (Build37)2 (Build37)
Map Location 110,709,960 - 110,710,85817,138,517 - 17,138,587
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCyb5b, LOC100042791, Nfat5, Nqo1, Nob1, Wwp2, LOC100042812, Psmd7, LOC100041744, LOC668038
Downstream geneAtbf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051P14.bB6Ng01-051P14.g
ACCDH875464DH875465
length904173
definitionDH875464|Mus musculus domesticus DNA, BAC clone: B6Ng01-051P14, 5' end.DH875465|Mus musculus domesticus DNA, BAC clone: B6Ng01-051P14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(110,709,960 - 110,710,858)(17,138,517 - 17,138,587)
sequence
gaattctaagtgagaattttaatgtgggtatcaacagggctagggctgtg
tgtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagag
agagagacagagagacagagagacagagagacagagatagagacagagac
agagacagagacagagacagagacagagacacaaagcatgtacaatggaa
tcaaacagaacctttgctaggcaagtactttaccattgagctaccctacc
cgcaggccctgtgatttagatttggttgggactttagcaaccctctgtcc
acatctttctttactgtttgtgtaagactggtaacttcttcttgaataca
cactgctgctccacagatacctgaatgcagactttagtcctgtgcaccac
accctgctaaacaagctaaaatctgcatagacttgcctctacagaagctt
tttgaagtaggcgtgactttccttctaggcccgcccccttggatattatg
gtctgtcaagttgttttcagtattggtcaaggtctacacccagatcattt
ctacaaccttgactctcttaaaactgacaaatcatgttttgaagaaagca
aatcataaccaccctgtttctagacagttctgtagtaacaattctgaaat
ttaggtttctttaaaacacagaaaatattataaggaattgtttttgtttt
aaacccaggtgtgggatgtgtggctatctcagatcgttcacagcagctat
gatttgcctagtgctctaacagggacgtgatttttgctggctgtagatag
tttctgagattgtgtgacatttggaattttggggaactttttcagaggac
gtatacatgctagaggaccctaagatggatgttggggtgtttgtgttggt
tatt
tgctttttttctacaggtacattcattaaataaattttttaaaaaagata
ttttttatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtga
gaggtgtattatttttcccttgcctccaagcctgatatggtgccagccaa
cactgagggatggtaatgtcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_110709960_110710858
seq2: B6Ng01-051P14.b_44_947

seq1  GAATTCTAAGTGAGAATTTTAATGTGGGTATCAACAGGGCTAGGGCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTGAGAATTTTAATGTGGGTATCAACAGGGCTAGGGCTGTG  50

seq1  TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  100

seq1  AGAGAGACAGAGAGACAGAGAGACAGAGAGACAGAGATAGAGACAGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGAGAGACAGAGAGACAGAGAGACAGAGATAGAGACAGAGAC  150

seq1  AGAGACAGAGACAGAGACAGAGACAGAGACACAAAGCATGTACAATGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGAGACAGAGACAGAGACAGAGACACAAAGCATGTACAATGGAA  200

seq1  TCAAACAGAACCTTTGCTAGGCAAGTACTTTACCATTGAGCTACCCTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGAACCTTTGCTAGGCAAGTACTTTACCATTGAGCTACCCTACC  250

seq1  CGCAGGCCCTGTGATTTAGATTTGGTTGGGACTTTAGCAACCCTCTGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGCCCTGTGATTTAGATTTGGTTGGGACTTTAGCAACCCTCTGTCC  300

seq1  ACATCTTTCTTTACTGTTTGTGTAAGACTGGTAACTTCTTCTTGAATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTTCTTTACTGTTTGTGTAAGACTGGTAACTTCTTCTTGAATACA  350

seq1  CACTGCTGCTCCACAGATACCTGAATGCAGACTTTAGTCCTGTGCACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTGCTCCACAGATACCTGAATGCAGACTTTAGTCCTGTGCACCAC  400

seq1  ACCCTGCTAAACAAGCTAAAATCTGCATAGACTTGCCTCTACAGAAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCTAAACAAGCTAAAATCTGCATAGACTTGCCTCTACAGAAGCTT  450

seq1  TTTGAAGTAGGCGTGACTTTCCTTCTAGGCCCGCCCCCTTGGATATTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTAGGCGTGACTTTCCTTCTAGGCCCGCCCCCTTGGATATTATG  500

seq1  GTCTGTCAAGTTGTTTTCAGTATTGGTCAAGGTCTACACCCAGATCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCAAGTTGTTTTCAGTATTGGTCAAGGTCTACACCCAGATCATTT  550

seq1  CTACAACCTTGACTCTCTTAAAACTGACAAATCATG-TTTGAAGAAAGCA  599
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTACAACCTTGACTCTCTTAAAACTGACAAATCATGTTTTGAAGAAAGCA  600

seq1  AATCATAACCACCCTGTTTCTAGACAGTTCTGTAGTAACAATTCTGAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATAACCACCCTGTTTCTAGACAGTTCTGTAGTAACAATTCTGAAAT  650

seq1  TTAGGTTTCTTTAAAAACACAG-AAATATTATAAGGAATTGTTTTTGTTT  698
      |||||||||||| ||||||||| |||||||||||||||||||||||||||
seq2  TTAGGTTTCTTT-AAAACACAGAAAATATTATAAGGAATTGTTTTTGTTT  699

seq1  TAAACCCAGGTGTGGGATGTGTGGCTATCTCAGATCGTTCACAGCAGCTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCAGGTGTGGGATGTGTGGCTATCTCAGATCGTTCACAGCAGCTA  749

seq1  TGATTTGCCTAGTGCTCTAACAGGGACGTGA-TTTTGCTGGCTGTAGATA  797
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGATTTGCCTAGTGCTCTAACAGGGACGTGATTTTTGCTGGCTGTAGATA  799

seq1  GTTTCTGAGATTGTGTGACATTTGGAATTTT-GGGAAC-TTTTCAGAGGA  845
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  GTTTCTGAGATTGTGTGACATTTGGAATTTTGGGGAACTTTTTCAGAGGA  849

seq1  CGTATACATGCTAGGAGGACCCTAAGAGGGATGTTGGGTTGTT--GGTTG  893
      ||||||||||||| ||||||||||||| |||||||||| ||||   ||||
seq2  CGTATACATGCTA-GAGGACCCTAAGATGGATGTTGGGGTGTTTGTGTTG  898

seq1  GTTATT  899
      ||||||
seq2  GTTATT  904

seq1: chr2_17138517_17138587
seq2: B6Ng01-051P14.g_176_245 (reverse)

seq1  GATGACATTACCATCCCACAGTGTTGGCTGGCACCTTATCAGGCTTGGAT  50
      ||||||||||||||||| ||||||||||||||||| ||||||||||||| 
seq2  GATGACATTACCATCCCTCAGTGTTGGCTGGCACCATATCAGGCTTGGAG  50

seq1  GCAACTGGAAAAATAATACAC  71
      ||||  |||||||||||||||
seq2  GCAA-GGGAAAAATAATACAC  70