BAC Information

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BAC

Clone NameB6Ng01-052I02
Chromosome8 (Build37)
Map Location 61,342,825 - 61,483,753
singlet/doubletdoublet
Overlap gene4930431L04Rik, BC030500
Upstream genenone
Downstream geneLOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052I02.bB6Ng01-052I02.g
ACCDH875841DH875842
length1,0091,031
definitionDH875841|Mus musculus domesticus DNA, BAC clone: B6Ng01-052I02, 5' end.DH875842|Mus musculus domesticus DNA, BAC clone: B6Ng01-052I02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,342,825 - 61,343,847)(61,482,741 - 61,483,753)
sequence
gaattctttagtcccacctttctgcatcgttgctttacaaagatcctttg
caatagttcgtgtttccaaagtaatttcccacactataatgtgattcaac
tttattcttgaataaaagaccaagaaagaaaaaatatactatatttaaaa
agattactaaacaccttttaaaacaaggcacttagtatgaatactcatag
ttatgtgtatatgcactagatagtgactttttttattagaaaccacatat
agattctggacatgtgtctgaatttattagtaaaacatgacttgtctata
tatctctggatttgtaatatgttccttatacaagaaattctataaccaca
gatcttcaatggttcatgaccactgcagtgtctcctaaaagaataggtgg
gagaaatgaagaattttgtgaaaaaacaaataggatgatactggtgcaaa
aataagtctcaagcctgatagtaatataattcatgattttctaagaagtg
gaagcagccaggaacaggtattaaaaatatataggcaaactgatcaatga
aaccaaataaaatcccatgaatatatacagatgaagtaaaattattttaa
caaaggtacaaagatgatccaaacggatcataataatctctacagcaaat
gtgttgatatgatgagatatttacatgcaaaggtaaacaagttaacatat
catatcagttcccgaactggacacttatctcttagaatcagtctggagca
atcaaggtggcataaaaatggactgtgcatgcacattttaagtttaaact
tgttaatgcaaatggtatgtagacaagtataatctacaacatggtacaac
tccagtagcaagtacataagtaaatctagaaatcctgggcttggtaataa
ttgtttacatataacaccaaatgcagaaatatctctatactgaatattga
acatttaaaacttaccttttgatctttaatatactgaaaataatcaacca
ctagaaaaa
gaattcaaatctttcagaagtcatcaacctctattattaaaaatgaagct
taatttgaatgcaaaataagtctttttattggttattttatttatttaca
ttttaaatgtagttcccttcatggtatcccctctacaaatgtttatccca
tcctctcttccatttgcccctaagagggtgctccctcacccacctagcca
ctcctccctaaaccctctagcaaccccctacataagggcatcaagctttc
acaagatcaaggacctcccctcccactgatgccagataagactatcctct
gcaacacatgtagctgaagccatggacccaaaataagtctaaataaacct
gatttgtaaaatctccttaagaaatttcaaaaagagcagcaagatgatgc
tttctacactgagttccatcctctaaatgccaaatagaattcagaatctc
actttaacctctctacagattaactaaaaattctacaagagatatttcat
aatgatgtaaataacctatcttgagaatagaaaatgcagattgaacatag
acatctggctttgaaatggttctgttagcaggtttgaagtgtcagcagca
atagattatagttttttgtttttggggtttttttttttttttggtagctc
tcaaaagcagaagaaaatctcaaatggactctgtcatgaatggtgcattc
cttattataaatacagtataggagcatagaattcatgaacataaatcaga
gaaagaaaatagcgtagaatacctctattttgatttatagtagctataga
tcccaagattcccatgcatgttagaaaaaacaagaaatttctaccccaaa
tagtgggtagagggggctgggaagatgtagcttcattatggaagggttat
tttagcatgcacaaagcccagggtttggtccatagaaacctgtataaaat
atatctgtagatgggaaaaacctggcatgttttatagccagaaaaaaggt
aaatctggtttgtaaagaaaaaagaaatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61342825_61343847
seq2: B6Ng01-052I02.b_45_1053

seq1  GAATTCTTTAGTCCCACCTTTCTGCATCGTTGCTTTACAAAGATCCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGTCCCACCTTTCTGCATCGTTGCTTTACAAAGATCCTTTG  50

seq1  CAATAGTTCGTGTTTCCAAAGTAATTTCCCACACTATAATGTGATTCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTTCGTGTTTCCAAAGTAATTTCCCACACTATAATGTGATTCAAC  100

seq1  TTTATTCTTGAATAAAAGACCAAGAAAGAAAAAATATACTATATTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTTGAATAAAAGACCAAGAAAGAAAAAATATACTATATTTAAAA  150

seq1  AGATTACTAAACACCTTTTAAAACAAGGCACTTAGTATGAATACTCATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACTAAACACCTTTTAAAACAAGGCACTTAGTATGAATACTCATAG  200

seq1  TTATGTGTATATGCACTAGATAGTGACTTTTTTTATTAGAAACCACATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTATATGCACTAGATAGTGACTTTTTTTATTAGAAACCACATAT  250

seq1  AGATTCTGGACATGTGTCTGAATTTATTAGTAAAACATGACTTGTCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTGGACATGTGTCTGAATTTATTAGTAAAACATGACTTGTCTATA  300

seq1  TATCTCTGGATTTGTAATATGTTCCTTATACAAGAAATTCTATAACCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTGGATTTGTAATATGTTCCTTATACAAGAAATTCTATAACCACA  350

seq1  GATCTTCAATGGTTCATGACCACTGCAGTGTCTCCTAAAAGAATAGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCAATGGTTCATGACCACTGCAGTGTCTCCTAAAAGAATAGGTGG  400

seq1  GAGAAATGAAGAATTTTGTGAAAAAACAAATAGGATGATACTGGTGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGAAGAATTTTGTGAAAAAACAAATAGGATGATACTGGTGCAAA  450

seq1  AATAAGTCTCAAGCCTGATAGTAATATAATTCATGATTTTCTAAGAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTCTCAAGCCTGATAGTAATATAATTCATGATTTTCTAAGAAGTG  500

seq1  GAAGCAGCCAGGAACAGGTATTAAAAATATATAGGCAAACTGATCAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGCCAGGAACAGGTATTAAAAATATATAGGCAAACTGATCAATGA  550

seq1  AACCAAATAAAATCCCATGAATATATACAGATGAAGTAAAATTATTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATAAAATCCCATGAATATATACAGATGAAGTAAAATTATTTTAA  600

seq1  CAAAGGTACAAAGATGATCCAAACGGATCATAATAATCTCTACAGCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTACAAAGATGATCCAAACGGATCATAATAATCTCTACAGCAAAT  650

seq1  GTGTTGATATGATGAGATATTTACATGCAAAGGTAAACAAGTTAACATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGATATGATGAGATATTTACATGCAAAGGTAAACAAGTTAACATAT  700

seq1  CATATCAGTTCCCGAACTGGACACTTATCTCTTAGAATCAGTCTGGAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCAGTTCCCGAACTGGACACTTATCTCTTAGAATCAGTCTGGAGCA  750

seq1  ATCAAGGTGGCATAAAAATGGACTGTGCATGCACATTTTAAGTTTTAAAC  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATCAAGGTGGCATAAAAATGGACTGTGCATGCACATTTTAAG-TTTAAAC  799

seq1  TTGTTAATGCAAAATGGTATGTAAGACAAAGTATAAACTACAACATGGTA  850
      |||||||||| ||||||||||| |||| |||||||| |||||||||||||
seq2  TTGTTAATGC-AAATGGTATGT-AGAC-AAGTATAATCTACAACATGGTA  846

seq1  CAACTCCAGTAGCAAGTACATAAGTAAATCTAGAAAATCCTGGGCTTGGT  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAACTCCAGTAGCAAGTACATAAGTAAATCTAG-AAATCCTGGGCTTGGT  895

seq1  AATAATTGTTTACATATAACACCAAATGCAGAAATATACTCTATACTGAA  950
      ||||||||||||||||||||||||||||||||||||| |||||||||| |
seq2  AATAATTGTTTACATATAACACCAAATGCAGAAATAT-CTCTATACTG-A  943

seq1  ATATTGAACATTTAAAACTATAAACTTTTTAATCTTTAAAATATACTGAA  1000
      |||||||||||||||||||    || |||| ||||||  ||||||||| |
seq2  ATATTGAACATTTAAAACT---TACCTTTTGATCTTT--AATATACTG-A  987

seq1  AAATAATCCAACCACTAGAAAAA  1023
      ||||||| |||||||||||||||
seq2  AAATAAT-CAACCACTAGAAAAA  1009

seq1: chr8_61482741_61483753
seq2: B6Ng01-052I02.g_70_1096 (reverse)

seq1  TTTCTTTTTTCTTTACAAA-CAGATCTAACCTCTCTTCT-GCT-TAAAAC  47
      ||||||||||||||||||| ||||| | |||| | |||| ||| ||||||
seq2  TTTCTTTTTTCTTTACAAACCAGAT-TTACCTTTTTTCTGGCTATAAAAC  49

seq1  ACTGCAGGTTTT--CCATCTACAGATATATTTTATA-ACGGTTCTATGGA  94
      |   ||||||||  |||||||||||||||||||||| | | |||||||||
seq2  ATGCCAGGTTTTTCCCATCTACAGATATATTTTATACAGGTTTCTATGGA  99

seq1  CCAAACCCTGGGCTTTGTGCATGCTAAATAAACCCTTCACTAGTG-AGCT  143
      ||||||||||||||||||||||||||||  ||||||||  || || ||||
seq2  CCAAACCCTGGGCTTTGTGCATGCTAAAATAACCCTTCCATAATGAAGCT  149

seq1  ACATCT--CCAG-CCCCTCTA-CCACTATTTTGGGTAGTAATTTCTTTGT  189
      ||||||  |||| |||||||| ||||||||| |||||| ||||||||  |
seq2  ACATCTTCCCAGCCCCCTCTACCCACTATTTGGGGTAGAAATTTCTTGTT  199

seq1  TTTTCTGACATGCATGTGAATCTTTGGGATCTATAGCTACTATAAATC-A  238
      |||||| ||||||||| ||||| ||||||||||||||||||||||||| |
seq2  TTTTCTAACATGCATGGGAATC-TTGGGATCTATAGCTACTATAAATCAA  248

seq1  AATAGAGGTATTCTACGCTATTTTCTTTCTCTGA-TTATGTTCATGAATT  287
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AATAGAGGTATTCTACGCTATTTTCTTTCTCTGATTTATGTTCATGAATT  298

seq1  CTATGCTCCTATACTGTATTTAT-ATAAGGAATGCACCATTCATGACAGA  336
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTATGCTCCTATACTGTATTTATAATAAGGAATGCACCATTCATGACAGA  348

seq1  GT-CATTTGAGATTTTCTTCTGC-TTTGAGAGCTACCAAAAAAAAAAAAA  384
      || |||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTCCATTTGAGATTTTCTTCTGCTTTTGAGAGCTACCAAAAAAAAAAAAA  398

seq1  AACCCCAAAAACAAAAAACTATAATCTATTGCTGCTGACACTTCAAACCT  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAAAAACAAAAAACTATAATCTATTGCTGCTGACACTTCAAACCT  448

seq1  GCTAACAGAACCATTTCAAAGCCAGATGTCTATGTTCAATCTGCATTTTC  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAGAACCATTTCAAAGCCAGATGTCTATGTTCAATCTGCATTTTC  498

seq1  TATTCTCAAGATAGGTTATTTACATCATTATGAAATATCTCTTGTAGAAT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCAAGATAGGTTATTTACATCATTATGAAATATCTCTTGTAGAAT  548

seq1  TTTTAGTTAATCTGTAGAGAGGTTAAAGTGAGATTCTGAATTCTATTTGG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTAATCTGTAGAGAGGTTAAAGTGAGATTCTGAATTCTATTTGG  598

seq1  CATTTAGAGGATGGAACTCAGTGTAGAAAGCATCATCTTGCTGCTCTTTT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGAGGATGGAACTCAGTGTAGAAAGCATCATCTTGCTGCTCTTTT  648

seq1  TGAAATTTCTTAAGGAGATTTTACAAATCAGGTTTATTTAGACTTATTTT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTCTTAAGGAGATTTTACAAATCAGGTTTATTTAGACTTATTTT  698

seq1  GGGTCCATGGCTTCAGCTACATGTGTTGCAGAGGATAGTCTTATCTGGCA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCATGGCTTCAGCTACATGTGTTGCAGAGGATAGTCTTATCTGGCA  748

seq1  TCAGTGGGAGGGGAGGTCCTTGATCTTGTGAAAGCTTGATGCCCTTATGT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGGAGGGGAGGTCCTTGATCTTGTGAAAGCTTGATGCCCTTATGT  798

seq1  AGGGGGTTGCTAGAGGGTTTAGGGAGGAGTGGCTAGGTGGGTGAGGGAGC  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGTTGCTAGAGGGTTTAGGGAGGAGTGGCTAGGTGGGTGAGGGAGC  848

seq1  ACCCTCTTAGGGGCAAATGGAAGAGAGGATGGGATAAACATTTGTAGAGG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTTAGGGGCAAATGGAAGAGAGGATGGGATAAACATTTGTAGAGG  898

seq1  GGATACCATGAAGGGAACTACATTTAAAATGTAAATAAATAAAATAACCA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACCATGAAGGGAACTACATTTAAAATGTAAATAAATAAAATAACCA  948

seq1  ATAAAAAGACTTATTTTGCATTCAAATTAAGCTTCATTTTTAATAATAGA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGACTTATTTTGCATTCAAATTAAGCTTCATTTTTAATAATAGA  998

seq1  GGTTGATGACTTCTGAAAGATTTGAATTC  1013
      |||||||||||||||||||||||||||||
seq2  GGTTGATGACTTCTGAAAGATTTGAATTC  1027