BAC Information

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BAC

Clone NameB6Ng01-053I11
Chromosome8 (Build37)
Map Location 44,424,301 - 44,542,897
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC628212, Triml1, LOC622082, EG622117, LOC100039417, Zfp42
Downstream geneAdam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053I11.bB6Ng01-053I11.g
ACCDH876551DH876552
length844797
definitionDH876551|Mus musculus domesticus DNA, BAC clone: B6Ng01-053I11, 5' end.DH876552|Mus musculus domesticus DNA, BAC clone: B6Ng01-053I11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,542,057 - 44,542,897)(44,424,301 - 44,425,094)
sequence
gaattctgagttagaatgacagataggcaggtttgtattttttactcatg
aaccagtatcagatattttctccccttaaatttcattaagatccagtttt
acaagctgggctatttatctaagggtaggaaaagcccttaatcctacaaa
ctgcacttatcgagtctgcggggaggatgatttaatagaaatgtaattca
cacttaggtagaaatattactattctctattaagtttacacagaactcat
cattttgtgcctctgggtttttgtataaaacagaagcttatagtaatata
acaatgtaatgaactggattttaaaattttgtaaaattttcataaatgtg
aaatcttctgttcacctcttcagaatcaatgatgttaatacctgccttga
aaaaactctctgtcagtgtcagaattctaaaattaaactaggctgaacta
gtcactgactttcaataaaataaatataataaacctatattctaaataca
tacaagtatttcagatgtaaaataaccacccaatttatctcaaaatagtt
ttgcttgaactaccacagcccaaaggagcagaacatattatatctttcag
cctgataaaactggttttgtgtccaccaggctatggtgagagccacatat
ggctgggtgacactttgacatgtgaatatgtcatagggaaatttgatttc
taagataattttaatttaatgaattttcagaccatgtggcttagtgacta
tggagttggacaagtctgtagaaattaaagttttccttagcagcaattct
ctcttgtgattcagcttcctcaacactttttatacagtcaacat
gaattcaatgtaataatggagctgtgtgtgatttaaataagaaaacacag
atgaacctcacaaccacagcaaagaacgtatcttttttaaacaggatttt
tctttttcatatgcaaggcaacaagaatatttatcttgcacttctaaaat
taagataatttgaaaatttctgtcaaacagatgttgaattaaaaatcatt
gttaccactctgaaatacaacattttaataaaggtttgaaaaaggttagt
cctattatctacagacagattaatttgttctttgcctgtagaaaagaaat
aatgacagagaatagccagaaaggacaggagaagtatgaaaaagaagtta
gggttattttttttcttttccagggtcagtatttaaaatcccatgatttt
agatttttttatggcatcctgaatttattcaacttctttgaactcacact
tcactaacaaaattctatcactagctttcaatatattgactttaaaaaaa
aaaaaaaaagacagagtttctctgtatagttctgactgtcctggaactca
ctgtagaccaggctggccttgaactcagaaatctgcctgtctctgcctcc
caagtgctggggaaatgcttcttggtcatggtactttatcacaacattag
aaaaatttattaatgtgtagaaaaaatattcatacacataaagtaaaata
aataaatctaaatttttttgaacttgcaaaatgaaatcgatgtgggaacc
catttttttttttttttttttgtttgttgggattagttttttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_44542057_44542897
seq2: B6Ng01-053I11.b_41_884 (reverse)

seq1  ATGTTGACTATAATAAAAAGTGTTGAGGAAGCTGAATCACAAGAGAGAAT  50
      ||||||||| | ||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGACTGT-ATAAAAAGTGTTGAGGAAGCTGAATCACAAGAGAGAAT  49

seq1  TGCTGCTAAGGAAAACTTTAATTTCTACAGACTTGTCCAACTCCATAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTAAGGAAAACTTTAATTTCTACAGACTTGTCCAACTCCATAGTC  99

seq1  ACT-AGCCACATGGTCTGAAAATTCATTAAATT-AAATTATCTTAGAAAT  148
      ||| ||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTAAGCCACATGGTCTGAAAATTCATTAAATTAAAATTATCTTAGAAAT  149

seq1  CAAATTTCCCTATGACATATTCACATGTC-AAGTGTCACCCAGCCATATG  197
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAAATTTCCCTATGACATATTCACATGTCAAAGTGTCACCCAGCCATATG  199

seq1  TGGCTCTCACCATAGCCTGGTGGACAC-AAACCAGTTTTATCAGGCTGAA  246
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGCTCTCACCATAGCCTGGTGGACACAAAACCAGTTTTATCAGGCTGAA  249

seq1  AGATATAATATGTTCTGCTCCTTTGGGCTGTGGTAGTTCAAGCAAAACTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAATATGTTCTGCTCCTTTGGGCTGTGGTAGTTCAAGCAAAACTA  299

seq1  TTTTGAGATAAATTGGGTGGTTATTTTACATCTGAAATACTTGTATGTAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGATAAATTGGGTGGTTATTTTACATCTGAAATACTTGTATGTAT  349

seq1  TTAGAATATAGGTTTATTATATTTATTTTATTGAAAGTCAGTGACTAGTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATATAGGTTTATTATATTTATTTTATTGAAAGTCAGTGACTAGTT  399

seq1  CAGCCTAGTTTAATTTTAGAATTCTGACACTGACAGAGAGTTTTTTCAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAGTTTAATTTTAGAATTCTGACACTGACAGAGAGTTTTTTCAAG  449

seq1  GCAGGTATTAACATCATTGATTCTGAAGAGGTGAACAGAAGATTTCACAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTATTAACATCATTGATTCTGAAGAGGTGAACAGAAGATTTCACAT  499

seq1  TTATGAAAATTTTACAAAATTTTAAAATCCAGTTCATTACATTGTTATAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAAATTTTACAAAATTTTAAAATCCAGTTCATTACATTGTTATAT  549

seq1  TACTATAAGCTTCTGTTTTATACAAAAACCCAGAGGCACAAAATGATGAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATAAGCTTCTGTTTTATACAAAAACCCAGAGGCACAAAATGATGAG  599

seq1  TTCTGTGTAAACTTAATAGAGAATAGTAATATTTCTACCTAAGTGTGAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTAAACTTAATAGAGAATAGTAATATTTCTACCTAAGTGTGAAT  649

seq1  TACATTTCTATTAAATCATCCTCCCCGCAGACTCGATAAGTGCAGTTTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCTATTAAATCATCCTCCCCGCAGACTCGATAAGTGCAGTTTGT  699

seq1  AGGATTAAGGGCTTTTCCTACCCTTAGATAAATAGCCCAGCTTGTAAAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAAGGGCTTTTCCTACCCTTAGATAAATAGCCCAGCTTGTAAAAC  749

seq1  TGGATCTTAATGAAATTTAAGGGGAGAAAATATCTGATACTGGTTCATGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTTAATGAAATTTAAGGGGAGAAAATATCTGATACTGGTTCATGA  799

seq1  GTAAAAAATACAAACCTGCCTATCTGTCATTCTAACTCAGAATTC  841
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAATACAAACCTGCCTATCTGTCATTCTAACTCAGAATTC  844

seq1: chr8_44424301_44425094
seq2: B6Ng01-053I11.g_71_867

seq1  GAATTCAATGTAATAATGGAGCTGTGTGTGATTTAAATAAGAAAACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTAATAATGGAGCTGTGTGTGATTTAAATAAGAAAACACAG  50

seq1  ATGAACCTCACAACCACAGCAAAGAACGTATCTTTTTTAAACAGGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCTCACAACCACAGCAAAGAACGTATCTTTTTTAAACAGGATTTT  100

seq1  TCTTTTTCATATGCAAGGCAACAAGAATATTTATCTTGCACTTCTAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCATATGCAAGGCAACAAGAATATTTATCTTGCACTTCTAAAAT  150

seq1  TAAGATAATTTGAAAATTTCTGTCAAACAGATGTTGAATTAAAAATCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAATTTGAAAATTTCTGTCAAACAGATGTTGAATTAAAAATCATT  200

seq1  GTTACCACTCTGAAATACAACATTTTAATAAAGGTTTGAAAAAGGTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCACTCTGAAATACAACATTTTAATAAAGGTTTGAAAAAGGTTAGT  250

seq1  CCTATTATCTACAGACAGATTAATTTGTTCTTTGCCTGTAGAAAAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTATCTACAGACAGATTAATTTGTTCTTTGCCTGTAGAAAAGAAAT  300

seq1  AATGACAGAGAATAGCCAGAAAGGACAGGAGAAGTATGAAAAAGAAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGAGAATAGCCAGAAAGGACAGGAGAAGTATGAAAAAGAAGTTA  350

seq1  GGGTTATTTTTTTTCTTTTCCAGGGTCAGTATTTAAAATCCCATGATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATTTTTTTTCTTTTCCAGGGTCAGTATTTAAAATCCCATGATTTT  400

seq1  AGATTTTTTTATGGCATCCTGAATTTATTCAACTTCTTTGAACTCACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTTATGGCATCCTGAATTTATTCAACTTCTTTGAACTCACACT  450

seq1  TCACTAACAAAATTCTATCACTAGCTTTCAATATATTGACTTTAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAACAAAATTCTATCACTAGCTTTCAATATATTGACTTTAAAAAAA  500

seq1  AAAAAAAAAGACAGAGTTTCTCTGTATAGTTCTGACTGTCCTGGAACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGACAGAGTTTCTCTGTATAGTTCTGACTGTCCTGGAACTCA  550

seq1  CTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGTCTCTGCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGTCTCTGCCTCC  600

seq1  CAAGTGCTGGGGAAATGCTTCTTGGTCATGGTACTTTATCACAACATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTGGGGAAATGCTTCTTGGTCATGGTACTTTATCACAACATTAG  650

seq1  -AAAATTTATTAATGTGTAGAAAAAATATTCATACACATAAAGTAAAATA  699
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTATTAATGTGTAGAAAAAATATTCATACACATAAAGTAAAATA  700

seq1  AATAAATCTAAA-TTTTTTGAACTTGCAAAATGAAATCGATGTGGGAACC  748
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATAAATCTAAATTTTTTTGAACTTGCAAAATGAAATCGATGTGGGAACC  750

seq1  CA-TTTTTTTTTTTTTTTTTTGTTTGTTTGGTTTTGTTTTTTTTTTT  794
      || ||||||||||||||||||||||||| || || ||||||||||||
seq2  CATTTTTTTTTTTTTTTTTTTGTTTGTTGGGATTAGTTTTTTTTTTT  797