BAC Information

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BAC

Clone NameB6Ng01-053I18
Chromosome8 (Build37)
Map Location 80,222,720 - 80,223,557
singlet/doubletsinglet
Overlap geneEdnra
Upstream geneLOC100039211, LOC384847, Nr3c2, Arhgap10, LOC100039235, AI931714, Tmem34
Downstream geneEG622803, Ttc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7, LOC100039466
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053I18.bB6Ng01-053I18.g
ACCDH876563DH876564
length968837
definitionDH876563|Mus musculus domesticus DNA, BAC clone: B6Ng01-053I18, 5' end.DH876564|Mus musculus domesticus DNA, BAC clone: B6Ng01-053I18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaagcccttgatcttggtcaaggacgttctagggctgttggaac
actggcaaaaggctttagccatgtcagaattcaattttaaaaagcactta
taatagaaaaatactgaaagagagcacgtggacctatacactagactaac
gcggtaatggaacacaggaatgaaaaattaatgtatgggtagagaacgct
agactccaggaggagagcttccttaaaactcttttgcctcatgagtgact
tttaagcctttctgcttgtccagctgactcgaccagagagcttagcagta
ctgagaaaaagccaataccagatcaatagctgcataccatgtaccagaag
taccatgaatggtttgttcaagtaaggacactacatctggtatagcagct
gcaatcagagttactgcctgacttagttttcagtagtcaaccgttttttt
ccatgatctatctgtcttctgtactgaccaggtaagaaggttaaagggag
gtgtggtgggaccaccactctgcatctttcagatccttgttggagacact
aatttctccaggaatacgatactgtttttgattcattattttctttggca
gaggcaactctaaaggcttccatttagcctttccaaccataatagccctc
attccactagtcagggaaccaatgtgagaatcttgctacctttctaaata
catctatttccaattatacattctgcaacaaggggaaataaccacaacat
gagttcagggacacactggacctactgtgagttggacatcagccaaaact
ccattaattgcctggcctccataagcccctacttaaagcctttccatggt
ttccaagtcccaaactcacatcttccaaacaaaagcacagcaggctatca
taacataccccatagaggactatataaccccaatgtgtcccatttaagga
accattctgcctctattt
gaattctcctattccaggttggatctgctgtattccatttttatggttta
aatacatgaccacatctggcttcccaccaagaagtagttaaaggaaaaaa
gagaacattgatagctttttcatataattatgactattccttggtatgtg
actgtcattggcgatgtttaaagattggctctgacattacggcctgagaa
actgctaattagctttccagatatgatgcactaaagatggatctgtagaa
gcacatggctttgtatcacctgccagtcggaaagaaaaaaatgattcata
tagatcttctaaatgttggcctatttgagatgtaatatcaaaaaatgcat
ccagcactaccatccccagtcttggccagccggaagattagaagattcag
actcagagcttgaaggctgcagtcaggttgcactggccctgaccagtata
accttgttatttcccaaggatacaaataaaacatagaactcattttcaaa
actttaaaaaggtgtaatggtatataacagatccttgactaggagcctaa
aattaataattgaaattttctttcaagtcactataatatttacattttga
tgtgtatagcctactgagttaatttacagtatggtttagctttccctttg
aaagtcataaaatagccttcacacattcaaaacatactgtcttctggctc
catctggggcattttccaagttctgacaacctgggttctttggggagagg
agaaaacagaggaataagaaactatcacagttggtgggaaggattaaaga
gcaactgaggtggggggtttagggagaggagagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_80222720_80223557
seq2: B6Ng01-053I18.g_70_906 (reverse)

seq1  CCCACTCTCCTCTCCCTAAACCCCCCAGCCTCAGTTGCTCTTTAATCCTT  50
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCCACTCTCCTCTCCCTAAACCCCCCA-CCTCAGTTGCTCTTTAATCCTT  49

seq1  CCCACCAACTGTGATAGTTTCTTATTCCTCTGTTTTCTCCTCTCCCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAACTGTGATAGTTTCTTATTCCTCTGTTTTCTCCTCTCCCCAAA  99

seq1  GAACCCAGGTTGTCAGAACTTGGAAAATGCCCCAGATGGAGCCAGAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGGTTGTCAGAACTTGGAAAATGCCCCAGATGGAGCCAGAAGAC  149

seq1  AGTATGTTTTGAATGTGTGAAGGCTATTTTATGACTTTCAAAGGGAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTTTTGAATGTGTGAAGGCTATTTTATGACTTTCAAAGGGAAAGC  199

seq1  TAAACCATACTGTAAATTAACTCAGTAGGCTATACACATCAAAATGTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATACTGTAAATTAACTCAGTAGGCTATACACATCAAAATGTAAA  249

seq1  TATTATAGTGACTTGAAAGAAAATTTCAATTATTAATTTTAGGCTCCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAGTGACTTGAAAGAAAATTTCAATTATTAATTTTAGGCTCCTAG  299

seq1  TCAAGGATCTGTTATATACCATTACACCTTTTTAAAGTTTTGAAAATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGATCTGTTATATACCATTACACCTTTTTAAAGTTTTGAAAATGAG  349

seq1  TTCTATGTTTTATTTGTATCCTTGGGAAATAACAAGGTTATACTGGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTTTTATTTGTATCCTTGGGAAATAACAAGGTTATACTGGTCAG  399

seq1  GGCCAGTGCAACCTGACTGCAGCCTTCAAGCTCTGAGTCTGAATCTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTGCAACCTGACTGCAGCCTTCAAGCTCTGAGTCTGAATCTTCTA  449

seq1  ATCTTCCGGCTGGCCAAGACTGGGGATGGTAGTGCTGGATGCATTTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCGGCTGGCCAAGACTGGGGATGGTAGTGCTGGATGCATTTTTTG  499

seq1  ATATTACATCTCAAATAGGCCAACATTTAGAAGATCTATATGAATCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACATCTCAAATAGGCCAACATTTAGAAGATCTATATGAATCATTT  549

seq1  TTTTCTTTCCGACTGGCAGGTGATACAAAGCCATGTGCTTCTACAGATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCCGACTGGCAGGTGATACAAAGCCATGTGCTTCTACAGATCC  599

seq1  ATCTTTAGTGCATCATATCTGGAAAGCTAATTAGCAGTTTCTCAGGCCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAGTGCATCATATCTGGAAAGCTAATTAGCAGTTTCTCAGGCCGT  649

seq1  AATGTCAGAGCCAATCTTTAAACATCGCCAATGACAGTCACATACCAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGAGCCAATCTTTAAACATCGCCAATGACAGTCACATACCAAGG  699

seq1  AATAGTCATAATTATATGAAAAAGCTATCAATGTTCTCTTTTTTCCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTCATAATTATATGAAAAAGCTATCAATGTTCTCTTTTTTCCTTTA  749

seq1  ACTACTTCTTGGTGGGAAGCCAGATGTGGTCATGTATTTAAACCATAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTCTTGGTGGGAAGCCAGATGTGGTCATGTATTTAAACCATAAAA  799

seq1  ATGGAATACAGCAGATCCAACCTGGAATAGGAGAATTC  838
      ||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATACAGCAGATCCAACCTGGAATAGGAGAATTC  837